RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
CSDE1-206ENST00000483030 PRPF40BQ6NWY9 871 aaKnown RBP9.94□□□□□ -0.82
CSDE1-206ENST00000483030 MKRN1Q9UHC7 482 aaKnown RBP9.94□□□□□ -0.82
CSDE1-206ENST00000483030 SBF1O95248 1867 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 TNRC6CQ9HCJ0 1690 aaKnown RBP9.93□□□□□ -0.82
CSDE1-206ENST00000483030 LTBP3Q9NS15 1303 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 BTBD11A6QL63 1104 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 PIP4K2AP48426 406 aaPredicted RBP9.93□□□□□ -0.82
CSDE1-206ENST00000483030 ST5P78524 1137 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 DZIP3Q86Y13 1208 aaKnown RBP9.93□□□□□ -0.82
CSDE1-206ENST00000483030 MASTLQ96GX5 879 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 PHACTR3Q96KR7 559 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 CREBZFQ9NS37 354 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 NRXN2Q9P2S2 1712 aa9.93□□□□□ -0.82
CSDE1-206ENST00000483030 AFDNP55196 1824 aaKnown RBP9.92□□□□□ -0.82
CSDE1-206ENST00000483030 SOGA3Q5TF21 947 aa9.92□□□□□ -0.82
CSDE1-206ENST00000483030 NBPF5PQ86XG9 351 aaPredicted RBP9.92□□□□□ -0.82
CSDE1-206ENST00000483030 PRAMEF22A3QJZ6 481 aa9.91□□□□□ -0.82
CSDE1-206ENST00000483030 PRKAR2BP31323 418 aa9.91□□□□□ -0.82
CSDE1-206ENST00000483030 C7orf43Q8WVR3 580 aa9.91□□□□□ -0.82
CSDE1-206ENST00000483030 CEMIPQ8WUJ3 1361 aa9.9□□□□□ -0.82
CSDE1-206ENST00000483030 IQCA1LA6NCM1 817 aa9.9□□□□□ -0.82
CSDE1-206ENST00000483030 CLEC4GQ6UXB4 293 aa9.9□□□□□ -0.82
CSDE1-206ENST00000483030 LDHDQ86WU2 507 aa9.9□□□□□ -0.82
CSDE1-206ENST00000483030 TAF1DQ9H5J8 278 aaPredicted RBP9.9□□□□□ -0.82
CSDE1-206ENST00000483030 PCNTO95613 3336 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 FAM177BA6PVY3 158 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 SNRPA1P09661 255 aaKnown RBP9.89□□□□□ -0.83
CSDE1-206ENST00000483030 NPR1P16066 1061 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 CCDC93Q567U6 631 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 EAPPQ56P03 285 aaPredicted RBP9.89□□□□□ -0.83
CSDE1-206ENST00000483030 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 TPTE2Q6XPS3 522 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 L3MBTL3Q96JM7 780 aaPredicted RBP9.89□□□□□ -0.83
CSDE1-206ENST00000483030 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 ZNF277Q9NRM2 450 aaPredicted RBP9.89□□□□□ -0.83
CSDE1-206ENST00000483030 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 ZNF652Q9Y2D9 606 aa9.89□□□□□ -0.83
CSDE1-206ENST00000483030 PASKQ96RG2 1323 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 COL3A1P02461 1466 aaPredicted RBP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 FOXN1O15353 648 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 ITGBL1O95965 494 aaPredicted RBP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 FKBP4Q02790 459 aaKnown RBP eCLIP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 NBPF10Q6P3W6 841 aaKnown RBP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 MCM10Q7L590 875 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 NBPF15Q8N660 670 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 RTF1Q92541 710 aaKnown RBP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 CFAP53Q96M91 514 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 NIP7Q9Y221 180 aaKnown RBP eCLIP9.88□□□□□ -0.83
CSDE1-206ENST00000483030 DLEC1Q9Y238 1755 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 CNTNAP1P78357 1384 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 NPC1L1Q9UHC9 1359 aa9.88□□□□□ -0.83
CSDE1-206ENST00000483030 ZNF541Q9H0D2 1346 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 U2AF1L5P0DN76 240 aaPredicted RBP9.87□□□□□ -0.83
CSDE1-206ENST00000483030 GTF2E1P29083 439 aaPredicted RBP9.87□□□□□ -0.83
CSDE1-206ENST00000483030 DSG3P32926 999 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 VEGFBP49765 207 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 U2AF1Q01081 240 aaKnown RBP eCLIP9.87□□□□□ -0.83
CSDE1-206ENST00000483030 DCTN1Q14203 1278 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 RTKN2Q8IZC4 609 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 SYNE4Q8N205 404 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 HACL1Q9UJ83 578 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 NUDCQ9Y266 331 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
CSDE1-206ENST00000483030 ALDH1B1P30837 517 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 EPHX2P34913 555 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 HLFQ16534 295 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 TIAM2Q8IVF5 1701 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 ANKRD31Q8N7Z5 1873 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 AIDAQ96BJ3 306 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
CSDE1-206ENST00000483030 SLX4Q8IY92 1834 aa9.85□□□□□ -0.83
CSDE1-206ENST00000483030 FZD9O00144 591 aa9.85□□□□□ -0.83
CSDE1-206ENST00000483030 IARSP41252 1262 aaKnown RBP9.85□□□□□ -0.83
CSDE1-206ENST00000483030 CTCFP49711 727 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-206ENST00000483030 MAP1SQ66K74 1059 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-206ENST00000483030 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
CSDE1-206ENST00000483030 NGEFQ8N5V2 710 aa9.85□□□□□ -0.83
CSDE1-206ENST00000483030 PRDM10Q9NQV6 1147 aa9.85□□□□□ -0.83
CSDE1-206ENST00000483030 CCDC88AQ3V6T2 1871 aa9.85□□□□□ -0.83
CSDE1-206ENST00000483030 COL11A2P13942 1736 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-206ENST00000483030 RNF123Q5XPI4 1314 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 SCN7AQ01118 1682 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 RGL2O15211 777 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 HTATSF1O43719 755 aaKnown RBP9.84□□□□□ -0.83
CSDE1-206ENST00000483030 TAF7Q15545 349 aaPredicted RBP9.84□□□□□ -0.83
CSDE1-206ENST00000483030 DEFB115Q30KQ5 88 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 PNMA8AQ86V59 439 aaPredicted RBP9.84□□□□□ -0.83
CSDE1-206ENST00000483030 JDP2Q8WYK2 163 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 FER1L6Q2WGJ9 1857 aa9.84□□□□□ -0.83
CSDE1-206ENST00000483030 PPP2R1AP30153 589 aa9.83□□□□□ -0.84
CSDE1-206ENST00000483030 LBX1P52954 281 aa9.83□□□□□ -0.84
CSDE1-206ENST00000483030 NUTM1Q86Y26 1132 aa9.83□□□□□ -0.84
CSDE1-206ENST00000483030 GPC2Q8N158 579 aa9.83□□□□□ -0.84
CSDE1-206ENST00000483030 RRP7AQ9Y3A4 280 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms