RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
COL21A1-209ENST00000482933 ZPR1O75312 459 aa17.05■□□□□ 0.32
COL21A1-209ENST00000482933 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
COL21A1-209ENST00000482933 STARD3NLO95772 234 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
COL21A1-209ENST00000482933 SRP68Q9UHB9 627 aaKnown RBP17.04■□□□□ 0.32
COL21A1-209ENST00000482933 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 KIF13BQ9NQT8 1826 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 NEFMP07197 916 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
COL21A1-209ENST00000482933 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
COL21A1-209ENST00000482933 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
COL21A1-209ENST00000482933 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
COL21A1-209ENST00000482933 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
COL21A1-209ENST00000482933 BTBD11A6QL63 1104 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.31
COL21A1-209ENST00000482933 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 NARFQ9UHQ1 456 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 COL15A1P39059 1388 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.31
COL21A1-209ENST00000482933 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
COL21A1-209ENST00000482933 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
COL21A1-209ENST00000482933 A0A087WZG4 1122 aa17■□□□□ 0.31
COL21A1-209ENST00000482933 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
COL21A1-209ENST00000482933 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
COL21A1-209ENST00000482933 TM4SF1P30408 202 aa16.99■□□□□ 0.31
COL21A1-209ENST00000482933 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
COL21A1-209ENST00000482933 A0A0G2JLW4 131 aa16.98■□□□□ 0.31
COL21A1-209ENST00000482933 EIF5P55010 431 aaKnown RBP16.98■□□□□ 0.31
COL21A1-209ENST00000482933 DDR1Q08345 913 aa16.98■□□□□ 0.31
COL21A1-209ENST00000482933 RALBP1Q15311 655 aa16.98■□□□□ 0.31
COL21A1-209ENST00000482933 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
COL21A1-209ENST00000482933 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
COL21A1-209ENST00000482933 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
COL21A1-209ENST00000482933 DPEP1P16444 411 aa16.97■□□□□ 0.31
COL21A1-209ENST00000482933 LCE2DQ5TA82 110 aaPredicted RBP16.97■□□□□ 0.31
COL21A1-209ENST00000482933 MCM10Q7L590 875 aa16.97■□□□□ 0.31
COL21A1-209ENST00000482933 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
COL21A1-209ENST00000482933 RNF25Q96BH1 459 aaPredicted RBP16.97■□□□□ 0.31
COL21A1-209ENST00000482933 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
COL21A1-209ENST00000482933 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
COL21A1-209ENST00000482933 IL6STP40189 918 aaPredicted RBP16.96■□□□□ 0.3
COL21A1-209ENST00000482933 KCNQ3O43525 872 aa16.95■□□□□ 0.3
COL21A1-209ENST00000482933 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
COL21A1-209ENST00000482933 NFIXQ14938 502 aa16.95■□□□□ 0.3
COL21A1-209ENST00000482933 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
COL21A1-209ENST00000482933 PIM2Q9P1W9 311 aa16.95■□□□□ 0.3
COL21A1-209ENST00000482933 DCTN1Q14203 1278 aa16.94■□□□□ 0.3
COL21A1-209ENST00000482933 TAF7Q15545 349 aaPredicted RBP16.94■□□□□ 0.3
COL21A1-209ENST00000482933 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
COL21A1-209ENST00000482933 ATP10DQ9P241 1426 aa16.93■□□□□ 0.3
COL21A1-209ENST00000482933 SERPINB2P05120 415 aa16.93■□□□□ 0.3
COL21A1-209ENST00000482933 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
COL21A1-209ENST00000482933 KCNA3P22001 575 aa16.93■□□□□ 0.3
COL21A1-209ENST00000482933 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
COL21A1-209ENST00000482933 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
COL21A1-209ENST00000482933 PCDH10Q9P2E7 1040 aa16.93■□□□□ 0.3
COL21A1-209ENST00000482933 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
COL21A1-209ENST00000482933 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
COL21A1-209ENST00000482933 G3V3G9 751 aa16.92■□□□□ 0.3
COL21A1-209ENST00000482933 SNPHO15079 494 aa16.92■□□□□ 0.3
COL21A1-209ENST00000482933 A1BGP04217 495 aa16.92■□□□□ 0.3
COL21A1-209ENST00000482933 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
COL21A1-209ENST00000482933 ADCY9O60503 1353 aa16.92■□□□□ 0.3
COL21A1-209ENST00000482933 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
COL21A1-209ENST00000482933 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
COL21A1-209ENST00000482933 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
COL21A1-209ENST00000482933 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
COL21A1-209ENST00000482933 PNISRQ8TF01 805 aaKnown RBP16.91■□□□□ 0.3
COL21A1-209ENST00000482933 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
COL21A1-209ENST00000482933 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
COL21A1-209ENST00000482933 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
COL21A1-209ENST00000482933 AFDNP55196 1824 aaKnown RBP16.9■□□□□ 0.3
COL21A1-209ENST00000482933 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
COL21A1-209ENST00000482933 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
COL21A1-209ENST00000482933 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
COL21A1-209ENST00000482933 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
COL21A1-209ENST00000482933 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
COL21A1-209ENST00000482933 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
COL21A1-209ENST00000482933 CHRNA5P30532 468 aa16.89■□□□□ 0.29
COL21A1-209ENST00000482933 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
COL21A1-209ENST00000482933 TBC1D9BQ66K14 1250 aa16.88■□□□□ 0.29
COL21A1-209ENST00000482933 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
COL21A1-209ENST00000482933 PRAMEF22A3QJZ6 481 aa16.87■□□□□ 0.29
COL21A1-209ENST00000482933 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
COL21A1-209ENST00000482933 CARMIL3Q8ND23 1372 aa16.87■□□□□ 0.29
COL21A1-209ENST00000482933 CAMTA2O94983 1202 aa16.87■□□□□ 0.29
COL21A1-209ENST00000482933 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
COL21A1-209ENST00000482933 MIS18AQ9NYP9 233 aa16.87■□□□□ 0.29
COL21A1-209ENST00000482933 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
COL21A1-209ENST00000482933 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
COL21A1-209ENST00000482933 ZNF526Q8TF50 670 aaPredicted RBP16.86■□□□□ 0.29
COL21A1-209ENST00000482933 BOLA1Q9Y3E2 137 aa16.86■□□□□ 0.29
COL21A1-209ENST00000482933 H0YIN7 160 aa16.85■□□□□ 0.29
COL21A1-209ENST00000482933 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms