RNA–Protein interactions for RNA: ENST00000482542.5

SFXN5-215, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-215ENST00000482542 LTBP3Q9NS15 1303 aa18.63■□□□□ 0.57
SFXN5-215ENST00000482542 AFDNP55196 1824 aaKnown RBP18.63■□□□□ 0.57
SFXN5-215ENST00000482542 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
SFXN5-215ENST00000482542 DCTN1Q14203 1278 aa18.62■□□□□ 0.57
SFXN5-215ENST00000482542 TAOK3Q9H2K8 898 aa18.62■□□□□ 0.57
SFXN5-215ENST00000482542 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
SFXN5-215ENST00000482542 VIRMAQ69YN4 1812 aaKnown RBP18.61■□□□□ 0.57
SFXN5-215ENST00000482542 SIPA1L3O60292 1781 aaPredicted RBP18.61■□□□□ 0.57
SFXN5-215ENST00000482542 PIP4K2AP48426 406 aaPredicted RBP18.61■□□□□ 0.57
SFXN5-215ENST00000482542 KLRG1Q96E93 195 aa18.61■□□□□ 0.57
SFXN5-215ENST00000482542 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
SFXN5-215ENST00000482542 NIP7Q9Y221 180 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFXN5-215ENST00000482542 KLRG2A4D1S0 409 aaPredicted RBP18.59■□□□□ 0.57
SFXN5-215ENST00000482542 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
SFXN5-215ENST00000482542 NPR1P16066 1061 aa18.59■□□□□ 0.57
SFXN5-215ENST00000482542 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
SFXN5-215ENST00000482542 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
SFXN5-215ENST00000482542 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
SFXN5-215ENST00000482542 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.56
SFXN5-215ENST00000482542 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
SFXN5-215ENST00000482542 GTF2E1P29083 439 aaPredicted RBP18.57■□□□□ 0.56
SFXN5-215ENST00000482542 JMYQ8N9B5 988 aa18.57■□□□□ 0.56
SFXN5-215ENST00000482542 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
SFXN5-215ENST00000482542 SBF1O95248 1867 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 ERVV-1B6SEH8 477 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 ALDH1B1P30837 517 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 HTRA3P83110 453 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
SFXN5-215ENST00000482542 C7orf43Q8WVR3 580 aa18.55■□□□□ 0.56
SFXN5-215ENST00000482542 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
SFXN5-215ENST00000482542 MAPK8IP3Q9UPT6 1336 aa18.54■□□□□ 0.56
SFXN5-215ENST00000482542 POTECB2RU33 542 aa18.54■□□□□ 0.56
SFXN5-215ENST00000482542 RTKN2Q8IZC4 609 aa18.54■□□□□ 0.56
SFXN5-215ENST00000482542 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
SFXN5-215ENST00000482542 HLFQ16534 295 aa18.53■□□□□ 0.56
SFXN5-215ENST00000482542 KIF6Q6ZMV9 814 aa18.53■□□□□ 0.56
SFXN5-215ENST00000482542 IQCA1LA6NCM1 817 aa18.52■□□□□ 0.56
SFXN5-215ENST00000482542 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
SFXN5-215ENST00000482542 FKBP4Q02790 459 aaKnown RBP eCLIP18.52■□□□□ 0.56
SFXN5-215ENST00000482542 DDNO94850 711 aaPredicted RBP18.51■□□□□ 0.55
SFXN5-215ENST00000482542 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
SFXN5-215ENST00000482542 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
SFXN5-215ENST00000482542 ANKRD31Q8N7Z5 1873 aa18.51■□□□□ 0.55
SFXN5-215ENST00000482542 MAP3K15Q6ZN16 1313 aa18.5■□□□□ 0.55
SFXN5-215ENST00000482542 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
SFXN5-215ENST00000482542 RALBP1Q15311 655 aa18.5■□□□□ 0.55
SFXN5-215ENST00000482542 CHADLQ6NUI6 762 aa18.5■□□□□ 0.55
SFXN5-215ENST00000482542 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
SFXN5-215ENST00000482542 CC2D2BQ6DHV5 1058 aa18.49■□□□□ 0.55
SFXN5-215ENST00000482542 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
SFXN5-215ENST00000482542 BABAM1Q9NWV8 329 aa18.49■□□□□ 0.55
SFXN5-215ENST00000482542 BCORQ6W2J9 1755 aa18.49■□□□□ 0.55
SFXN5-215ENST00000482542 MYL6BP14649 208 aa18.48■□□□□ 0.55
SFXN5-215ENST00000482542 CRY2Q49AN0 593 aa18.48■□□□□ 0.55
SFXN5-215ENST00000482542 GRIPAP1Q4V328 841 aa18.48■□□□□ 0.55
SFXN5-215ENST00000482542 COL11A2P13942 1736 aaPredicted RBP18.47■□□□□ 0.55
SFXN5-215ENST00000482542 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
SFXN5-215ENST00000482542 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
SFXN5-215ENST00000482542 ZNF277Q9NRM2 450 aaPredicted RBP18.47■□□□□ 0.55
SFXN5-215ENST00000482542 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
SFXN5-215ENST00000482542 RIPK4P57078 832 aa18.46■□□□□ 0.55
SFXN5-215ENST00000482542 TTLL7Q6ZT98 887 aa18.46■□□□□ 0.55
SFXN5-215ENST00000482542 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
SFXN5-215ENST00000482542 PSMD1Q99460 953 aa18.46■□□□□ 0.55
SFXN5-215ENST00000482542 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
SFXN5-215ENST00000482542 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.54
SFXN5-215ENST00000482542 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
SFXN5-215ENST00000482542 SLX4Q8IY92 1834 aa18.45■□□□□ 0.54
SFXN5-215ENST00000482542 HOXA10P31260 410 aaPredicted RBP18.45■□□□□ 0.54
SFXN5-215ENST00000482542 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
SFXN5-215ENST00000482542 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
SFXN5-215ENST00000482542 PPP1R42Q7Z4L9 355 aa18.45■□□□□ 0.54
SFXN5-215ENST00000482542 LDHDQ86WU2 507 aa18.45■□□□□ 0.54
SFXN5-215ENST00000482542 NUTM1Q86Y26 1132 aa18.45■□□□□ 0.54
SFXN5-215ENST00000482542 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
SFXN5-215ENST00000482542 ZBTB3Q9H5J0 574 aa18.45■□□□□ 0.54
SFXN5-215ENST00000482542 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
SFXN5-215ENST00000482542 PARP10Q53GL7 1025 aa18.44■□□□□ 0.54
SFXN5-215ENST00000482542 ZNF34Q8IZ26 560 aa18.44■□□□□ 0.54
SFXN5-215ENST00000482542 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
SFXN5-215ENST00000482542 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
SFXN5-215ENST00000482542 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
SFXN5-215ENST00000482542 FZD9O00144 591 aa18.43■□□□□ 0.54
SFXN5-215ENST00000482542 GPTP24298 496 aa18.43■□□□□ 0.54
SFXN5-215ENST00000482542 SUSD4Q5VX71 490 aa18.43■□□□□ 0.54
SFXN5-215ENST00000482542 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
SFXN5-215ENST00000482542 TMX4Q9H1E5 349 aaPredicted RBP18.43■□□□□ 0.54
SFXN5-215ENST00000482542 HACL1Q9UJ83 578 aa18.43■□□□□ 0.54
SFXN5-215ENST00000482542 RIC1Q4ADV7 1423 aa18.42■□□□□ 0.54
SFXN5-215ENST00000482542 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
SFXN5-215ENST00000482542 PNMA8AQ86V59 439 aaPredicted RBP18.42■□□□□ 0.54
SFXN5-215ENST00000482542 POTEIP0CG38 1075 aa18.41■□□□□ 0.54
SFXN5-215ENST00000482542 POTEJP0CG39 1038 aa18.41■□□□□ 0.54
SFXN5-215ENST00000482542 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
SFXN5-215ENST00000482542 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
SFXN5-215ENST00000482542 GPC2Q8N158 579 aa18.41■□□□□ 0.54
SFXN5-215ENST00000482542 NLRP3Q96P20 1036 aa18.41■□□□□ 0.54
SFXN5-215ENST00000482542 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms