RNA–Protein interactions for RNA: ENST00000482429.1

LTB-212, Transcript of lymphotoxin beta, humanhuman

TSL 2

Gene LTB, Length 1,388 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-212ENST00000482429 ST5P78524 1137 aa27.72■■■□□ 2.03
LTB-212ENST00000482429 NPM2Q86SE8 214 aaKnown RBP27.72■■■□□ 2.03
LTB-212ENST00000482429 BCORQ6W2J9 1755 aa27.72■■■□□ 2.03
LTB-212ENST00000482429 COL3A1P02461 1466 aaPredicted RBP27.71■■■□□ 2.03
LTB-212ENST00000482429 DDNO94850 711 aaPredicted RBP27.71■■■□□ 2.03
LTB-212ENST00000482429 PRPF40BQ6NWY9 871 aaKnown RBP27.71■■■□□ 2.03
LTB-212ENST00000482429 MASTLQ96GX5 879 aa27.71■■■□□ 2.03
LTB-212ENST00000482429 SCN4AP35499 1836 aa27.7■■■□□ 2.02
LTB-212ENST00000482429 NPHP1O15259 732 aa27.7■■■□□ 2.02
LTB-212ENST00000482429 IQCA1LA6NCM1 817 aa27.69■■■□□ 2.02
LTB-212ENST00000482429 A1BGP04217 495 aa27.69■■■□□ 2.02
LTB-212ENST00000482429 POTEIP0CG38 1075 aa27.69■■■□□ 2.02
LTB-212ENST00000482429 POTEJP0CG39 1038 aa27.69■■■□□ 2.02
LTB-212ENST00000482429 CEMIPQ8WUJ3 1361 aa27.69■■■□□ 2.02
LTB-212ENST00000482429 L3MBTL3Q96JM7 780 aaPredicted RBP27.68■■■□□ 2.02
LTB-212ENST00000482429 MKRN1Q9UHC7 482 aaKnown RBP27.68■■■□□ 2.02
LTB-212ENST00000482429 CNGB1Q14028 1251 aaPredicted RBP27.67■■■□□ 2.02
LTB-212ENST00000482429 CC2D1BQ5T0F9 858 aaKnown RBP27.67■■■□□ 2.02
LTB-212ENST00000482429 CNTNAP1P78357 1384 aa27.66■■■□□ 2.02
LTB-212ENST00000482429 LDHDQ86WU2 507 aa27.66■■■□□ 2.02
LTB-212ENST00000482429 DZIP3Q86Y13 1208 aaKnown RBP27.66■■■□□ 2.02
LTB-212ENST00000482429 PASKQ96RG2 1323 aa27.65■■■□□ 2.02
LTB-212ENST00000482429 U2SURPO15042 1029 aaKnown RBP27.65■■■□□ 2.02
LTB-212ENST00000482429 CLEC4GQ6UXB4 293 aa27.65■■■□□ 2.02
LTB-212ENST00000482429 C7orf43Q8WVR3 580 aa27.65■■■□□ 2.02
LTB-212ENST00000482429 NPC1L1Q9UHC9 1359 aa27.64■■■□□ 2.02
LTB-212ENST00000482429 TAF1DQ9H5J8 278 aaPredicted RBP27.63■■■□□ 2.01
LTB-212ENST00000482429 BTBD11A6QL63 1104 aa27.62■■■□□ 2.01
LTB-212ENST00000482429 CCDC93Q567U6 631 aa27.62■■■□□ 2.01
LTB-212ENST00000482429 NBPF5PQ86XG9 351 aaPredicted RBP27.61■■■□□ 2.01
LTB-212ENST00000482429 KLRG2A4D1S0 409 aaPredicted RBP27.6■■■□□ 2.01
LTB-212ENST00000482429 KCNQ3O43525 872 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 PRDM10Q9NQV6 1147 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 ZNF652Q9Y2D9 606 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 RGL2O15211 777 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 FOXN1O15353 648 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 NPR1P16066 1061 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 USP16Q9Y5T5 823 aa27.6■■■□□ 2.01
LTB-212ENST00000482429 FKBP4Q02790 459 aaKnown RBP eCLIP27.59■■■□□ 2.01
LTB-212ENST00000482429 ITGBL1O95965 494 aaPredicted RBP27.58■■■□□ 2.01
LTB-212ENST00000482429 TMEM88BA6NKF7 163 aa27.57■■■□□ 2
LTB-212ENST00000482429 ADAMTSL1Q8N6G6 1762 aa27.56■■■□□ 2
LTB-212ENST00000482429 TPTE2Q6XPS3 522 aa27.56■■■□□ 2
LTB-212ENST00000482429 RTKN2Q8IZC4 609 aa27.56■■■□□ 2
LTB-212ENST00000482429 PHACTR3Q96KR7 559 aa27.56■■■□□ 2
LTB-212ENST00000482429 SNRPA1P09661 255 aaKnown RBP27.55■■■□□ 2
LTB-212ENST00000482429 HACL1Q9UJ83 578 aa27.55■■■□□ 2
LTB-212ENST00000482429 ZNF541Q9H0D2 1346 aa27.54■■■□□ 2
LTB-212ENST00000482429 PIP4K2AP48426 406 aaPredicted RBP27.54■■■□□ 2
LTB-212ENST00000482429 CTCFP49711 727 aaPredicted RBP27.54■■■□□ 2
LTB-212ENST00000482429 VEGFBP49765 207 aa27.54■■■□□ 2
LTB-212ENST00000482429 AIDAQ96BJ3 306 aa27.54■■■□□ 2
LTB-212ENST00000482429 RSPH6AQ9H0K4 717 aa27.54■■■□□ 2
LTB-212ENST00000482429 ZNF277Q9NRM2 450 aaPredicted RBP27.54■■■□□ 2
LTB-212ENST00000482429 PRKAR2BP31323 418 aa27.53■■■□□ 2
LTB-212ENST00000482429 EAPPQ56P03 285 aaPredicted RBP27.52■■■□□ 2
LTB-212ENST00000482429 PRAMEF22A3QJZ6 481 aa27.51■■□□□ 1.99
LTB-212ENST00000482429 EPHX2P34913 555 aa27.51■■□□□ 1.99
LTB-212ENST00000482429 PNMA8AQ86V59 439 aaPredicted RBP27.51■■□□□ 1.99
LTB-212ENST00000482429 NIP7Q9Y221 180 aaKnown RBP eCLIP27.51■■□□□ 1.99
LTB-212ENST00000482429 FZD9O00144 591 aa27.5■■□□□ 1.99
LTB-212ENST00000482429 ALDH1B1P30837 517 aa27.5■■□□□ 1.99
LTB-212ENST00000482429 MIER1Q8N108 512 aa27.5■■□□□ 1.99
LTB-212ENST00000482429 WBP1LQ9NX94 342 aa27.5■■□□□ 1.99
LTB-212ENST00000482429 CLEC11AQ9Y240 323 aa27.49■■□□□ 1.99
LTB-212ENST00000482429 RASSF10A6NK89 507 aa27.48■■□□□ 1.99
LTB-212ENST00000482429 NBPF26B4DH59 902 aa27.48■■□□□ 1.99
LTB-212ENST00000482429 ANP32CO43423 234 aa27.48■■□□□ 1.99
LTB-212ENST00000482429 IARSP41252 1262 aaKnown RBP27.48■■□□□ 1.99
LTB-212ENST00000482429 NBPF10Q6P3W6 841 aaKnown RBP27.48■■□□□ 1.99
LTB-212ENST00000482429 OLFM4Q6UX06 510 aa27.48■■□□□ 1.99
LTB-212ENST00000482429 NBPF15Q8N660 670 aa27.48■■□□□ 1.99
LTB-212ENST00000482429 CFAP53Q96M91 514 aa27.48■■□□□ 1.99
LTB-212ENST00000482429 RTF1Q92541 710 aaKnown RBP27.48■■□□□ 1.99
LTB-212ENST00000482429 CNTROBQ8N137 903 aa27.47■■□□□ 1.99
LTB-212ENST00000482429 GPC2Q8N158 579 aa27.47■■□□□ 1.99
LTB-212ENST00000482429 SYNE4Q8N205 404 aa27.46■■□□□ 1.99
LTB-212ENST00000482429 PSMD1Q99460 953 aa27.46■■□□□ 1.99
LTB-212ENST00000482429 NUDCQ9Y266 331 aa27.46■■□□□ 1.99
LTB-212ENST00000482429 RNF123Q5XPI4 1314 aa27.46■■□□□ 1.99
LTB-212ENST00000482429 SNED1Q8TER0 1413 aa27.45■■□□□ 1.99
LTB-212ENST00000482429 DEFB115Q30KQ5 88 aa27.45■■□□□ 1.98
LTB-212ENST00000482429 MCM10Q7L590 875 aa27.45■■□□□ 1.98
LTB-212ENST00000482429 HTATSF1O43719 755 aaKnown RBP27.43■■□□□ 1.98
LTB-212ENST00000482429 LBX1P52954 281 aa27.43■■□□□ 1.98
LTB-212ENST00000482429 CRY2Q49AN0 593 aa27.43■■□□□ 1.98
LTB-212ENST00000482429 MAP1SQ66K74 1059 aaPredicted RBP27.43■■□□□ 1.98
LTB-212ENST00000482429 CC2D2BQ6DHV5 1058 aa27.43■■□□□ 1.98
LTB-212ENST00000482429 JDP2Q8WYK2 163 aa27.43■■□□□ 1.98
LTB-212ENST00000482429 PRKRIP1Q9H875 184 aaPredicted RBP27.43■■□□□ 1.98
LTB-212ENST00000482429 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
LTB-212ENST00000482429 GTF2E1P29083 439 aaPredicted RBP27.42■■□□□ 1.98
LTB-212ENST00000482429 HLFQ16534 295 aa27.42■■□□□ 1.98
LTB-212ENST00000482429 LAMB4A4D0S4 1761 aa27.42■■□□□ 1.98
LTB-212ENST00000482429 NYXQ9GZU5 481 aa27.41■■□□□ 1.98
LTB-212ENST00000482429 MAP2K1Q02750 393 aaPredicted RBP27.4■■□□□ 1.98
LTB-212ENST00000482429 WDR33Q9C0J8 1336 aaKnown RBP27.39■■□□□ 1.98
LTB-212ENST00000482429 U2AF1L5P0DN76 240 aaPredicted RBP27.39■■□□□ 1.98
LTB-212ENST00000482429 U2AF1Q01081 240 aaKnown RBP eCLIP27.39■■□□□ 1.98
LTB-212ENST00000482429 GRIPAP1Q4V328 841 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms