RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 SYCE3A1L190 88 aa9.97□□□□□ -0.81
TNPO3-204ENST00000482320 IPO8O15397 1037 aaKnown RBP9.97□□□□□ -0.81
TNPO3-204ENST00000482320 ANXA1P04083 346 aa9.97□□□□□ -0.81
TNPO3-204ENST00000482320 SSH1Q8WYL5 1049 aa9.97□□□□□ -0.81
TNPO3-204ENST00000482320 GJD4Q96KN9 370 aaPredicted RBP9.97□□□□□ -0.81
TNPO3-204ENST00000482320 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
TNPO3-204ENST00000482320 ARAP2Q8WZ64 1704 aa9.97□□□□□ -0.81
TNPO3-204ENST00000482320 CDCA7Q9BWT1 371 aaPredicted RBP9.96□□□□□ -0.81
TNPO3-204ENST00000482320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.813e-6■■□□□ 13.2
TNPO3-204ENST00000482320 SPATA31A1Q5TZJ5 1347 aa9.96□□□□□ -0.81
TNPO3-204ENST00000482320 CHL1O00533 1208 aa9.96□□□□□ -0.81
TNPO3-204ENST00000482320 MYL6BP14649 208 aa9.96□□□□□ -0.81
TNPO3-204ENST00000482320 IL16Q14005 1332 aa9.96□□□□□ -0.82
TNPO3-204ENST00000482320 LAMB2P55268 1798 aa9.96□□□□□ -0.82
TNPO3-204ENST00000482320 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.82
TNPO3-204ENST00000482320 PIP4K2AP48426 406 aaPredicted RBP9.96□□□□□ -0.82
TNPO3-204ENST00000482320 FKBP5Q13451 457 aaPredicted RBP9.96□□□□□ -0.82
TNPO3-204ENST00000482320 CERS3Q8IU89 383 aa9.96□□□□□ -0.82
TNPO3-204ENST00000482320 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.82
TNPO3-204ENST00000482320 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.82
TNPO3-204ENST00000482320 COL5A2P05997 1499 aaPredicted RBP9.95□□□□□ -0.82
TNPO3-204ENST00000482320 RARSP54136 660 aaKnown RBP9.95□□□□□ -0.82
TNPO3-204ENST00000482320 RAB3GAP1Q15042 981 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 SASS6Q6UVJ0 657 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 ZNF771Q7L3S4 317 aaPredicted RBP9.95□□□□□ -0.82
TNPO3-204ENST00000482320 ZKSCAN2Q63HK3 967 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 CCDC94Q9BW85 323 aaPredicted RBP9.95□□□□□ -0.82
TNPO3-204ENST00000482320 NOB1Q9ULX3 412 aaKnown RBP9.95□□□□□ -0.82
TNPO3-204ENST00000482320 SLIT3O75094 1523 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 DMTNQ08495 405 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 VPS72Q15906 364 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 CCDC30Q5VVM6 783 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 NOL7Q9UMY1 257 aaKnown RBP9.95□□□□□ -0.82
TNPO3-204ENST00000482320 SPATA31A5Q5VU36 1347 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 SPATA31A7Q8IWB4 1347 aa9.95□□□□□ -0.82
TNPO3-204ENST00000482320 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 RBSNQ9H1K0 784 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 MRC1P22897 1456 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 ZNF772Q68DY9 489 aaPredicted RBP9.94□□□□□ -0.82
TNPO3-204ENST00000482320 CHMP3Q9Y3E7 222 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 NPHP1O15259 732 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 VAMP4O75379 141 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 FNBP4Q8N3X1 1017 aaPredicted RBP9.94□□□□□ -0.82
TNPO3-204ENST00000482320 MEGF6O75095 1541 aa9.94□□□□□ -0.82
TNPO3-204ENST00000482320 LTN1O94822 1766 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 PAXIP1Q6ZW49 1069 aaPredicted RBP9.93□□□□□ -0.82
TNPO3-204ENST00000482320 SMC5Q8IY18 1101 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 ZNF496Q96IT1 587 aaPredicted RBP9.93□□□□□ -0.82
TNPO3-204ENST00000482320 FMNL2Q96PY5 1086 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 THRAP3Q9Y2W1 955 aaKnown RBP9.93□□□□□ -0.82
TNPO3-204ENST00000482320 ERICH4A6NGS2 130 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 ZNF500O60304 480 aaPredicted RBP9.93□□□□□ -0.82
TNPO3-204ENST00000482320 KLHL40Q2TBA0 621 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 ASAP1Q9ULH1 1129 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 ZKSCAN5Q9Y2L8 839 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 AK9Q5TCS8 1911 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 RXRBP28702 533 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 HS1BP3Q53T59 392 aa9.93□□□□□ -0.82
TNPO3-204ENST00000482320 UTP14CQ5TAP6 766 aaKnown RBP9.92□□□□□ -0.82
TNPO3-204ENST00000482320 IL17RAQ96F46 866 aa9.92□□□□□ -0.82
TNPO3-204ENST00000482320 NAP1L2Q9ULW6 460 aaPredicted RBP9.92□□□□□ -0.82
TNPO3-204ENST00000482320 TTC12Q9H892 705 aaPredicted RBP9.92□□□□□ -0.82
TNPO3-204ENST00000482320 AHDC1Q5TGY3 1603 aaPredicted RBP9.92□□□□□ -0.82
TNPO3-204ENST00000482320 PRAMEF22A3QJZ6 481 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 KCNQ2O43526 872 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
TNPO3-204ENST00000482320 MARCH10Q8NA82 808 aaPredicted RBP9.91□□□□□ -0.82
TNPO3-204ENST00000482320 SPC24Q8NBT2 197 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 ERVV-2B6SEH9 535 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 KCNQ4P56696 695 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 PIGBQ92521 554 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 F6X3S4 739 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 BAG4O95429 457 aaKnown RBP9.91□□□□□ -0.82
TNPO3-204ENST00000482320 SNRPA1P09661 255 aaKnown RBP9.91□□□□□ -0.82
TNPO3-204ENST00000482320 CT47B1P0C2W7 299 aaPredicted RBP9.91□□□□□ -0.82
TNPO3-204ENST00000482320 ZNF853P0CG23 659 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 EIF4A1P60842 406 aaKnown RBP9.91□□□□□ -0.82
TNPO3-204ENST00000482320 SNX21Q969T3 373 aa9.91□□□□□ -0.82
TNPO3-204ENST00000482320 KIF16BQ96L93 1317 aa9.9□□□□□ -0.82
TNPO3-204ENST00000482320 ZSCAN20P17040 1043 aaPredicted RBP9.9□□□□□ -0.82
TNPO3-204ENST00000482320 ZSCAN23Q3MJ62 389 aa9.9□□□□□ -0.82
TNPO3-204ENST00000482320 CHPF2Q9P2E5 772 aa9.9□□□□□ -0.82
TNPO3-204ENST00000482320 K7ELQ4 463 aaPredicted RBP9.9□□□□□ -0.82
TNPO3-204ENST00000482320 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
TNPO3-204ENST00000482320 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.83
TNPO3-204ENST00000482320 LARP6Q9BRS8 491 aaKnown RBP9.9□□□□□ -0.83
TNPO3-204ENST00000482320 USP16Q9Y5T5 823 aa9.9□□□□□ -0.83
TNPO3-204ENST00000482320 U2AF2P26368 475 aaKnown RBP eCLIP9.89□□□□□ -0.837e-7■■■■■ 27.1
TNPO3-204ENST00000482320 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
TNPO3-204ENST00000482320 ATF7IPQ6VMQ6 1270 aa9.89□□□□□ -0.83
TNPO3-204ENST00000482320 KRT27Q7Z3Y8 459 aa9.89□□□□□ -0.83
TNPO3-204ENST00000482320 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
TNPO3-204ENST00000482320 NSFL1CQ9UNZ2 370 aaKnown RBP9.89□□□□□ -0.83
TNPO3-204ENST00000482320 KIAA2012Q0VF49 1180 aa9.89□□□□□ -0.83
TNPO3-204ENST00000482320 BARGINQ6ZT62 677 aa9.89□□□□□ -0.83
TNPO3-204ENST00000482320 ZGPATQ8N5A5 531 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms