RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 SRGAP3O43295 1099 aa27.38■■□□□ 1.97
RUNX1-216ENST00000482318 GCKRQ14397 625 aa27.38■■□□□ 1.97
RUNX1-216ENST00000482318 LRRCC1Q9C099 1032 aa27.38■■□□□ 1.97
RUNX1-216ENST00000482318 USP21Q9UK80 565 aa27.38■■□□□ 1.97
RUNX1-216ENST00000482318 EXOC6BQ9Y2D4 811 aa27.38■■□□□ 1.97
RUNX1-216ENST00000482318 NPM2Q86SE8 214 aaKnown RBP27.37■■□□□ 1.97
RUNX1-216ENST00000482318 FAM98CQ17RN3 349 aaKnown RBP27.36■■□□□ 1.97
RUNX1-216ENST00000482318 PLEKHM2Q8IWE5 1019 aa27.36■■□□□ 1.97
RUNX1-216ENST00000482318 DNAJC10Q8IXB1 793 aa27.36■■□□□ 1.97
RUNX1-216ENST00000482318 APBB1O00213 710 aa27.36■■□□□ 1.97
RUNX1-216ENST00000482318 RAB11FIP3O75154 756 aa27.36■■□□□ 1.97
RUNX1-216ENST00000482318 HSPA1LP34931 641 aa27.36■■□□□ 1.97
RUNX1-216ENST00000482318 HSP90AB4PQ58FF6 505 aa27.36■■□□□ 1.97
RUNX1-216ENST00000482318 TJP1Q07157 1748 aa27.35■■□□□ 1.97
RUNX1-216ENST00000482318 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
RUNX1-216ENST00000482318 UPF2Q9HAU5 1272 aaKnown RBP27.35■■□□□ 1.97
RUNX1-216ENST00000482318 SMARCA5O60264 1052 aaPredicted RBP27.33■■□□□ 1.96
RUNX1-216ENST00000482318 CICQ96RK0 1608 aaPredicted RBP27.32■■□□□ 1.96
RUNX1-216ENST00000482318 COL15A1P39059 1388 aa27.32■■□□□ 1.96
RUNX1-216ENST00000482318 TTLL7Q6ZT98 887 aa27.32■■□□□ 1.96
RUNX1-216ENST00000482318 THSD7AQ9UPZ6 1657 aa27.32■■□□□ 1.96
RUNX1-216ENST00000482318 SURF6O75683 361 aaKnown RBP27.31■■□□□ 1.96
RUNX1-216ENST00000482318 SUCLG2Q96I99 432 aa27.31■■□□□ 1.96
RUNX1-216ENST00000482318 CYP19A1P11511 503 aaPredicted RBP27.3■■□□□ 1.96
RUNX1-216ENST00000482318 TTC22Q5TAA0 569 aa27.3■■□□□ 1.96
RUNX1-216ENST00000482318 C16orf71Q8IYS4 520 aaPredicted RBP27.3■■□□□ 1.96
RUNX1-216ENST00000482318 IPO9Q96P70 1041 aaKnown RBP27.3■■□□□ 1.96
RUNX1-216ENST00000482318 KIF6Q6ZMV9 814 aa27.29■■□□□ 1.96
RUNX1-216ENST00000482318 ACSBG1Q96GR2 724 aa27.29■■□□□ 1.96
RUNX1-216ENST00000482318 NOP58Q9Y2X3 529 aaKnown RBP27.29■■□□□ 1.96
RUNX1-216ENST00000482318 A0A0G2JS52 829 aa27.28■■□□□ 1.96
RUNX1-216ENST00000482318 SLC4A9Q96Q91 983 aa27.28■■□□□ 1.96
RUNX1-216ENST00000482318 OSBPL3Q9H4L5 887 aa27.28■■□□□ 1.96
RUNX1-216ENST00000482318 BICC1Q9H694 974 aaKnown RBP27.28■■□□□ 1.96
RUNX1-216ENST00000482318 SMARCC1Q92922 1105 aaPredicted RBP27.27■■□□□ 1.96
RUNX1-216ENST00000482318 KIF1BPQ96EK5 621 aa27.27■■□□□ 1.96
RUNX1-216ENST00000482318 ATP5J2-PTCD1G3V325 749 aa27.27■■□□□ 1.96
RUNX1-216ENST00000482318 DDRGK1Q96HY6 314 aa27.27■■□□□ 1.96
RUNX1-216ENST00000482318 KAZALD1Q96I82 304 aa27.27■■□□□ 1.96
RUNX1-216ENST00000482318 ZBTB3Q9H5J0 574 aa27.27■■□□□ 1.96
RUNX1-216ENST00000482318 CWC25Q9NXE8 425 aaPredicted RBP27.27■■□□□ 1.96
RUNX1-216ENST00000482318 A0A087WZG4 1122 aa27.26■■□□□ 1.95
RUNX1-216ENST00000482318 EIF5BO60841 1220 aaKnown RBP27.26■■□□□ 1.95
RUNX1-216ENST00000482318 SEC24BO95487 1268 aa27.26■■□□□ 1.95
RUNX1-216ENST00000482318 MYT1Q01538 1121 aa27.26■■□□□ 1.95
RUNX1-216ENST00000482318 CCDC191Q8NCU4 936 aa27.26■■□□□ 1.95
RUNX1-216ENST00000482318 BCL11AQ9H165 835 aa27.26■■□□□ 1.95
RUNX1-216ENST00000482318 ERC1Q8IUD2 1116 aa27.25■■□□□ 1.95
RUNX1-216ENST00000482318 OTUD7AQ8TE49 926 aaPredicted RBP27.25■■□□□ 1.95
RUNX1-216ENST00000482318 ZNF831Q5JPB2 1677 aa27.25■■□□□ 1.95
RUNX1-216ENST00000482318 RHPN1Q8TCX5 695 aa27.24■■□□□ 1.95
RUNX1-216ENST00000482318 ZNF330Q9Y3S2 320 aaPredicted RBP27.24■■□□□ 1.95
RUNX1-216ENST00000482318 PDE1AP54750 535 aa27.24■■□□□ 1.95
RUNX1-216ENST00000482318 UBE3BQ7Z3V4 1068 aa27.24■■□□□ 1.95
RUNX1-216ENST00000482318 AFF2P51816 1311 aa27.23■■□□□ 1.95
RUNX1-216ENST00000482318 SALL3Q9BXA9 1300 aa27.23■■□□□ 1.95
RUNX1-216ENST00000482318 GSPT1P15170 499 aaKnown RBP27.23■■□□□ 1.95
RUNX1-216ENST00000482318 OS9Q13438 667 aaPredicted RBP27.23■■□□□ 1.95
RUNX1-216ENST00000482318 PALLDQ8WX93 1383 aa27.22■■□□□ 1.95
RUNX1-216ENST00000482318 CDC45O75419 566 aa27.22■■□□□ 1.95
RUNX1-216ENST00000482318 IL6STP40189 918 aaPredicted RBP27.22■■□□□ 1.95
RUNX1-216ENST00000482318 MAP3K15Q6ZN16 1313 aa27.22■■□□□ 1.95
RUNX1-216ENST00000482318 LOC102724428A0A0B4J2F2 783 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 H7C1W4 665 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 MX1P20591 662 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 SIK1P57059 783 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 GJD4Q96KN9 370 aaPredicted RBP27.21■■□□□ 1.95
RUNX1-216ENST00000482318 RREB1Q92766 1687 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 AOX1Q06278 1338 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 ANKRD36CQ5JPF3 1778 aa27.21■■□□□ 1.95
RUNX1-216ENST00000482318 TRIM28Q13263 835 aaKnown RBP27.21■■□□□ 1.95
RUNX1-216ENST00000482318 ATRNO75882 1429 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 ATP6V1AP38606 617 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 CASP7P55210 303 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 RABL6Q3YEC7 729 aaPredicted RBP27.2■■□□□ 1.94
RUNX1-216ENST00000482318 HSP90AB3PQ58FF7 597 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 ISCA1Q9BUE6 129 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 STAP2Q9UGK3 403 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 TRPC5Q9UL62 973 aaPredicted RBP27.2■■□□□ 1.94
RUNX1-216ENST00000482318 ZBTB1Q9Y2K1 713 aa27.2■■□□□ 1.94
RUNX1-216ENST00000482318 TUBGCP6Q96RT7 1819 aa27.19■■□□□ 1.94
RUNX1-216ENST00000482318 NHSQ6T4R5 1651 aa27.18■■□□□ 1.94
RUNX1-216ENST00000482318 GIGYF2Q6Y7W6 1299 aaKnown RBP27.18■■□□□ 1.94
RUNX1-216ENST00000482318 TBC1D32Q96NH3 1257 aa27.18■■□□□ 1.94
RUNX1-216ENST00000482318 IL1RAPL2Q9NP60 686 aa27.18■■□□□ 1.94
RUNX1-216ENST00000482318 CCDC87Q9NVE4 849 aa27.18■■□□□ 1.94
RUNX1-216ENST00000482318 G3BP1Q13283 466 aaKnown RBP eCLIP27.17■■□□□ 1.94
RUNX1-216ENST00000482318 COL5A3P25940 1745 aaPredicted RBP27.17■■□□□ 1.94
RUNX1-216ENST00000482318 MFAP1P55081 439 aaKnown RBP27.16■■□□□ 1.94
RUNX1-216ENST00000482318 EPHA10Q5JZY3 1008 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 TBC1D9Q6ZT07 1266 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 NUP98P52948 1817 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 ERVV-1B6SEH8 477 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 KCNQ2O43526 872 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 CASC1Q6TDU7 716 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 CLASRPQ8N2M8 674 aaKnown RBP27.16■■□□□ 1.94
RUNX1-216ENST00000482318 ARXQ96QS3 562 aa27.16■■□□□ 1.94
RUNX1-216ENST00000482318 SDSP20132 328 aa27.15■■□□□ 1.94
RUNX1-216ENST00000482318 PA2G4Q9UQ80 394 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms