RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 ADCY9O60503 1353 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 HSPA2P54652 639 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 ZNF445P59923 1031 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 KRT32Q14532 448 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 PI4K2BQ8TCG2 481 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
CAPN8-208ENST00000482183 HMG20BQ9P0W2 317 aa12.1□□□□□ -0.47
CAPN8-208ENST00000482183 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
CAPN8-208ENST00000482183 NBPF7P0C2Y1 421 aaPredicted RBP12.09□□□□□ -0.47
CAPN8-208ENST00000482183 PDCP20941 246 aa12.09□□□□□ -0.47
CAPN8-208ENST00000482183 CABP4P57796 275 aa12.09□□□□□ -0.47
CAPN8-208ENST00000482183 HS1BP3Q53T59 392 aa12.09□□□□□ -0.47
CAPN8-208ENST00000482183 LRRC59Q96AG4 307 aaKnown RBP12.09□□□□□ -0.47
CAPN8-208ENST00000482183 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
CAPN8-208ENST00000482183 LIMCH1Q9UPQ0 1083 aa12.09□□□□□ -0.47
CAPN8-208ENST00000482183 MRC1P22897 1456 aa12.08□□□□□ -0.47
CAPN8-208ENST00000482183 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
CAPN8-208ENST00000482183 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
CAPN8-208ENST00000482183 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
CAPN8-208ENST00000482183 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
CAPN8-208ENST00000482183 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CAPN8-208ENST00000482183 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
CAPN8-208ENST00000482183 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
CAPN8-208ENST00000482183 TMEM94Q12767 1356 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 XRCC6P12956 609 aaKnown RBP eCLIP12.07□□□□□ -0.48
CAPN8-208ENST00000482183 SSFA2P28290 1259 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 MCTP1Q6DN14 999 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
CAPN8-208ENST00000482183 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 ATG3Q9NT62 314 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
CAPN8-208ENST00000482183 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
CAPN8-208ENST00000482183 CD2BP2O95400 341 aaKnown RBP12.06□□□□□ -0.48
CAPN8-208ENST00000482183 BRD1O95696 1058 aa12.06□□□□□ -0.48
CAPN8-208ENST00000482183 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
CAPN8-208ENST00000482183 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
CAPN8-208ENST00000482183 KCNB2Q92953 911 aa12.06□□□□□ -0.48
CAPN8-208ENST00000482183 GZF1Q9H116 711 aaPredicted RBP12.06□□□□□ -0.48
CAPN8-208ENST00000482183 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
CAPN8-208ENST00000482183 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
CAPN8-208ENST00000482183 KCNJ4P48050 445 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 GCKRQ14397 625 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 AACSQ86V21 672 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
CAPN8-208ENST00000482183 PARP4Q9UKK3 1724 aaKnown RBP12.04□□□□□ -0.48
CAPN8-208ENST00000482183 NASPP49321 788 aaPredicted RBP12.04□□□□□ -0.48
CAPN8-208ENST00000482183 ZC3H6P61129 1189 aaKnown RBP12.04□□□□□ -0.48
CAPN8-208ENST00000482183 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
CAPN8-208ENST00000482183 LMBRD1Q9NUN5 540 aa12.04□□□□□ -0.48
CAPN8-208ENST00000482183 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
CAPN8-208ENST00000482183 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
CAPN8-208ENST00000482183 PXDNQ92626 1479 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 ATP5JP18859 108 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 NFATC2IPQ8NCF5 419 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 ZCRB1Q8TBF4 217 aaKnown RBP12.03□□□□□ -0.48
CAPN8-208ENST00000482183 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
CAPN8-208ENST00000482183 KCNQ3O43525 872 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 MCM5P33992 734 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 PDIA6Q15084 440 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
CAPN8-208ENST00000482183 RABL6Q3YEC7 729 aaPredicted RBP12.02□□□□□ -0.49
CAPN8-208ENST00000482183 COPS6Q7L5N1 327 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 BICC1Q9H694 974 aaKnown RBP12.02□□□□□ -0.49
CAPN8-208ENST00000482183 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
CAPN8-208ENST00000482183 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 WDR17Q8IZU2 1322 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 CRYBG1Q9Y4K1 1723 aa12.02□□□□□ -0.49
CAPN8-208ENST00000482183 PRPF40AO75400 957 aaKnown RBP12.01□□□□□ -0.49
CAPN8-208ENST00000482183 CLCN1P35523 988 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 AIMP1Q12904 312 aaKnown RBP12.01□□□□□ -0.49
CAPN8-208ENST00000482183 UVSSAQ2YD98 709 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 CWC27Q6UX04 472 aaKnown RBP12.01□□□□□ -0.49
CAPN8-208ENST00000482183 RUFY3Q7L099 469 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 CCDC191Q8NCU4 936 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 XAGE3Q8WTP9 111 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN8-208ENST00000482183 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 SUCLG2Q96I99 432 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 FSD1Q9BTV5 496 aa12.01□□□□□ -0.49
CAPN8-208ENST00000482183 CARD10Q9BWT7 1032 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms