RNA–Protein interactions for RNA: ENST00000481652.1

PHTF1-210, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-210ENST00000481652 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
PHTF1-210ENST00000481652 SLFNL1Q499Z3 407 aa8.46□□□□□ -1.06
PHTF1-210ENST00000481652 CHMP4AQ9BY43 222 aa8.46□□□□□ -1.06
PHTF1-210ENST00000481652 PCDHB11Q9Y5F2 797 aa8.46□□□□□ -1.06
PHTF1-210ENST00000481652 ITSN2Q9NZM3 1697 aa8.46□□□□□ -1.06
PHTF1-210ENST00000481652 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.06
PHTF1-210ENST00000481652 SPINT1O43278 529 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 LILRA1O75019 489 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 CC2D2BQ6DHV5 1058 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 CAMTA1Q9Y6Y1 1673 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 KIF27Q86VH2 1401 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 ZNF518AQ6AHZ1 1483 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 LRRC9Q6ZRR7 1453 aa8.45□□□□□ -1.06
PHTF1-210ENST00000481652 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
PHTF1-210ENST00000481652 COL13A1Q5TAT6 717 aaPredicted RBP8.44□□□□□ -1.06
PHTF1-210ENST00000481652 GPR161Q8N6U8 529 aaKnown RBP8.44□□□□□ -1.06
PHTF1-210ENST00000481652 AGBL1Q96MI9 1066 aa8.44□□□□□ -1.06
PHTF1-210ENST00000481652 MYCP01106 439 aaPredicted RBP8.43□□□□□ -1.06
PHTF1-210ENST00000481652 ERVK-9P63128 1117 aa8.43□□□□□ -1.06
PHTF1-210ENST00000481652 R3HDM1Q15032 1099 aaKnown RBP8.43□□□□□ -1.06
PHTF1-210ENST00000481652 SLAIN2Q9P270 581 aa8.43□□□□□ -1.06
PHTF1-210ENST00000481652 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
PHTF1-210ENST00000481652 KDM5DQ9BY66 1539 aa8.43□□□□□ -1.06
PHTF1-210ENST00000481652 LOC105371045A0A1W2PR82 267 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 ATP5J2-PTCD1G3V325 749 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 ADD1P35611 737 aaKnown RBP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 PTGIRP43119 386 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 CYP2U1Q7Z449 544 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 THEMISQ8N1K5 641 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 PCGF6Q9BYE7 350 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 ZNF395Q9H8N7 513 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 POLMQ9NP87 494 aaPredicted RBP8.42□□□□□ -1.06
PHTF1-210ENST00000481652 TMEM94Q12767 1356 aa8.42□□□□□ -1.06
PHTF1-210ENST00000481652 INSM2Q96T92 566 aaPredicted RBP8.41□□□□□ -1.06
PHTF1-210ENST00000481652 ZC3H13Q5T200 1668 aaKnown RBP8.4□□□□□ -1.06
PHTF1-210ENST00000481652 ADGBQ8N7X0 1667 aa8.4□□□□□ -1.06
PHTF1-210ENST00000481652 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.06
PHTF1-210ENST00000481652 PLEKHD1A6NEE1 506 aa8.4□□□□□ -1.06
PHTF1-210ENST00000481652 TNS4Q8IZW8 715 aa8.4□□□□□ -1.06
PHTF1-210ENST00000481652 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
PHTF1-210ENST00000481652 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
PHTF1-210ENST00000481652 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.06
PHTF1-210ENST00000481652 USP4Q13107 963 aa8.39□□□□□ -1.07
PHTF1-210ENST00000481652 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
PHTF1-210ENST00000481652 MAP3K1Q13233 1512 aa8.39□□□□□ -1.07
PHTF1-210ENST00000481652 RTEL1-TNFRSF6BF6WH68 1400 aa8.38□□□□□ -1.07
PHTF1-210ENST00000481652 FIGNL2A6NMB9 653 aa8.38□□□□□ -1.07
PHTF1-210ENST00000481652 CDK11BP21127 795 aaKnown RBP8.38□□□□□ -1.07
PHTF1-210ENST00000481652 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
PHTF1-210ENST00000481652 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
PHTF1-210ENST00000481652 PHTF2Q8N3S3 785 aa8.38□□□□□ -1.07
PHTF1-210ENST00000481652 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
PHTF1-210ENST00000481652 MLH3Q9UHC1 1453 aa8.38□□□□□ -1.07
PHTF1-210ENST00000481652 MEN1O00255 615 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 SCTRP47872 440 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 PTSQ03393 145 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 NLRP3Q96P20 1036 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 BCCIPQ9P287 314 aaKnown RBP eCLIP8.37□□□□□ -1.07
PHTF1-210ENST00000481652 PPP1R1BQ9UD71 204 aaPredicted RBP8.37□□□□□ -1.07
PHTF1-210ENST00000481652 FAM135AQ9P2D6 1515 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 CHD4Q14839 1912 aa8.37□□□□□ -1.07
PHTF1-210ENST00000481652 TNRQ92752 1358 aa8.36□□□□□ -1.07
PHTF1-210ENST00000481652 UGGT1Q9NYU2 1555 aa8.36□□□□□ -1.07
PHTF1-210ENST00000481652 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
PHTF1-210ENST00000481652 KDF1Q8NAX2 398 aaPredicted RBP8.36□□□□□ -1.07
PHTF1-210ENST00000481652 OSBPL3Q9H4L5 887 aa8.36□□□□□ -1.07
PHTF1-210ENST00000481652 TRPC5Q9UL62 973 aaPredicted RBP8.36□□□□□ -1.07
PHTF1-210ENST00000481652 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 TRAK2O60296 914 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 GNRH1P01148 92 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 RBM10P98175 930 aaKnown RBP8.35□□□□□ -1.07
PHTF1-210ENST00000481652 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 RNFT1Q5M7Z0 435 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 PROSER2Q86WR7 435 aaPredicted RBP8.35□□□□□ -1.07
PHTF1-210ENST00000481652 CDCA7Q9BWT1 371 aaPredicted RBP8.35□□□□□ -1.07
PHTF1-210ENST00000481652 ALG2Q9H553 416 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 USP21Q9UK80 565 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 KIF14Q15058 1648 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 DIP2AQ14689 1571 aa8.35□□□□□ -1.07
PHTF1-210ENST00000481652 ATP7AQ04656 1500 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 GPC1P35052 558 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
PHTF1-210ENST00000481652 CLN3Q13286 438 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 GGT6Q6P531 493 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 PLPP7Q8NBV4 271 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 CLUAP1Q96AJ1 413 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 NINLQ9Y2I6 1382 aa8.34□□□□□ -1.07
PHTF1-210ENST00000481652 AHDC1Q5TGY3 1603 aaPredicted RBP8.33□□□□□ -1.08
PHTF1-210ENST00000481652 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
PHTF1-210ENST00000481652 DEKP35659 375 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms