RNA–Protein interactions for RNA: ENST00000481600.5

EDRF1-208, Transcript of erythroid differentiation regulatory factor 1, human

TSL 2

Gene EDRF1, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDRF1-208	ENST00000481600	AK9	Q5TCS8	1911 aa		13.88	□□□□□ -0.19
EDRF1-208	ENST00000481600	SRGAP3	O43295	1099 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	SIL1	Q9H173	461 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	AOX1	Q06278	1338 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	KDM4A	O75164	1064 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	LRSAM1	Q6UWE0	723 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	GPT2	Q8TD30	523 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600		G3V3G9	751 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	ESCO1	Q5FWF5	840 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	DCAF8	Q5TAQ9	597 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	IL17RE	Q8NFR9	667 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	PALD1	Q9ULE6	856 aa		13.87	□□□□□ -0.19
EDRF1-208	ENST00000481600	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	PPP1R42	Q7Z4L9	355 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	USP44	Q9H0E7	712 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	TMX4	Q9H1E5	349 aa	Predicted RBP	13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	SSH2	Q76I76	1423 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	KIF1BP	Q96EK5	621 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	WDR33	Q9C0J8	1336 aa	Known RBP	13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	BRD1	O95696	1058 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	SPC24	Q8NBT2	197 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	CUL4A	Q13619	759 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	VPS53	Q5VIR6	699 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	CYP46A1	Q9Y6A2	500 aa		13.86	□□□□□ -0.19
EDRF1-208	ENST00000481600	SALL3	Q9BXA9	1300 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	PEAK1	Q9H792	1746 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	ATP2B1	P20020	1258 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	HS1BP3	Q53T59	392 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	STK3	Q13188	491 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	SAFB	Q15424	915 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	VPS37D	Q86XT2	251 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	USHBP1	Q8N6Y0	703 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	RHPN1	Q8TCX5	695 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	SSH3	Q8TE77	659 aa		13.85	□□□□□ -0.19
EDRF1-208	ENST00000481600	EPB41L2	O43491	1005 aa	Known RBP	13.84	□□□□□ -0.19
EDRF1-208	ENST00000481600	KIN	O60870	393 aa	Known RBP	13.84	□□□□□ -0.19
EDRF1-208	ENST00000481600	PHAX	Q9H814	394 aa	Known RBP	13.84	□□□□□ -0.19
EDRF1-208	ENST00000481600	TMEM63C	Q9P1W3	806 aa		13.84	□□□□□ -0.19
EDRF1-208	ENST00000481600	PTPRU	Q92729	1446 aa		13.84	□□□□□ -0.19
EDRF1-208	ENST00000481600	CHAMP1	Q96JM3	812 aa		13.84	□□□□□ -0.19
EDRF1-208	ENST00000481600	IPO7	O95373	1038 aa	Known RBP	13.83	□□□□□ -0.19
EDRF1-208	ENST00000481600	CWC27	Q6UX04	472 aa	Known RBP	13.83	□□□□□ -0.19
EDRF1-208	ENST00000481600	UNC5CL	Q8IV45	518 aa		13.83	□□□□□ -0.19
EDRF1-208	ENST00000481600	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	DNAAF4	Q8WXU2	420 aa		13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	HOOK1	Q9UJC3	728 aa	Known RBP	13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	LARP1B	Q659C4	914 aa	Known RBP	13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	ERICH2	A1L162	156 aa		13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	LETM1	O95202	739 aa	Predicted RBP	13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.83	□□□□□ -0.2
EDRF1-208	ENST00000481600	ATF3	P18847	181 aa		13.82	□□□□□ -0.2
EDRF1-208	ENST00000481600	ERC1	Q8IUD2	1116 aa		13.82	□□□□□ -0.2
EDRF1-208	ENST00000481600	ANKRD20A12P	Q8NF67	263 aa		13.82	□□□□□ -0.2
EDRF1-208	ENST00000481600	UBR1	Q8IWV7	1749 aa		13.82	□□□□□ -0.2
EDRF1-208	ENST00000481600	HSPA4	P34932	840 aa		13.82	□□□□□ -0.2
EDRF1-208	ENST00000481600	RGPD1	P0DJD0	1748 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	HIP1	O00291	1037 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	MNS1	Q8NEH6	495 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	RAD21	O60216	631 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	NAT10	Q9H0A0	1025 aa	Known RBP	13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	PI4KAP2	A4QPH2	592 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	FAM177B	A6PVY3	158 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	PI4KAP1	Q8N8J0	262 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	TOPAZ1	Q8N9V7	1692 aa		13.81	□□□□□ -0.2
EDRF1-208	ENST00000481600	DHX16	O60231	1041 aa	Known RBP	13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	CHPF2	Q9P2E5	772 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	OFD1	O75665	1012 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	GLRX3	O76003	335 aa	Known RBP	13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	KRT85	P78386	507 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	JAKMIP1	Q96N16	626 aa	Known RBP	13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	NALCN	Q8IZF0	1738 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	SGSM2	O43147	1006 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	MYL6B	P14649	208 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	GPS2	Q13227	327 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	BLOC1S2	Q6QNY1	142 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	AACS	Q86V21	672 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	GDPD2	Q9HCC8	539 aa		13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.8	□□□□□ -0.2
EDRF1-208	ENST00000481600	CCDC192	P0DO97	292 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	MTERF4	Q7Z6M4	381 aa	Known RBP	13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	PDILT	Q8N807	584 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	PRDM10	Q9NQV6	1147 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	NOL7	Q9UMY1	257 aa	Known RBP	13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	HMGN5	P82970	282 aa	Known RBP	13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	POLA2	Q14181	598 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	PHF8	Q9UPP1	1060 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	RAD50	Q92878	1312 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	BTBD11	A6QL63	1104 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	HOXB7	P09629	217 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	KCNA6	P17658	529 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	STK38	Q15208	465 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	FERMT3	Q86UX7	667 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	LIMCH1	Q9UPQ0	1083 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	PXDNL	A1KZ92	1463 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	UQCRHL	A0A096LP55	91 aa		13.79	□□□□□ -0.2
EDRF1-208	ENST00000481600	UQCRH	P07919	91 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms