RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 CCDC50Q8IVM0 306 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-205ENST00000481474 TSPY26PQ9H489 355 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 ABCF3Q9NUQ8 709 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 STX8Q9UNK0 236 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 TBC1D12O60347 775 aa13.33□□□□□ -0.27
TRIM27-205ENST00000481474 HLA-DOAP06340 250 aa13.33□□□□□ -0.27
TRIM27-205ENST00000481474 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.27
TRIM27-205ENST00000481474 BRPF3Q9ULD4 1205 aa13.33□□□□□ -0.27
TRIM27-205ENST00000481474 TSPY2A6NKD2 308 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 GOLGA8AA7E2F4 631 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 GOLGA8BA8MQT2 603 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 GSDMBQ8TAX9 411 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 BOLA2Q9H3K6 86 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 SUDS3Q9H7L9 328 aaPredicted RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 RPUSD2Q8IZ73 545 aaKnown RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 WDR48Q8TAF3 677 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 L3MBTL2Q969R5 705 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 MTIF2P46199 727 aaKnown RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 SLC9A5Q14940 896 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC148Q8NFR7 591 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 BACH1O14867 736 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
TRIM27-205ENST00000481474 MAP10Q9P2G4 905 aa13.33□□□□□ -0.28
TRIM27-205ENST00000481474 VPS36Q86VN1 386 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 PDE4AP27815 886 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 SYNDIG1Q9H7V2 258 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC39Q9UFE4 941 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-205ENST00000481474 MYZAPP0CAP1 466 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
TRIM27-205ENST00000481474 EXOC5O00471 708 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 KRT9P35527 623 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 NBPF5PQ86XG9 351 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-205ENST00000481474 LRRC43Q8N309 656 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 NAP1L3Q99457 506 aaPredicted RBP13.32□□□□□ -0.28
TRIM27-205ENST00000481474 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
TRIM27-205ENST00000481474 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
TRIM27-205ENST00000481474 HSP90AA4PQ58FG1 418 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
TRIM27-205ENST00000481474 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
TRIM27-205ENST00000481474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
TRIM27-205ENST00000481474 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC194A0A1B0GVG4 234 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 CETN1Q12798 172 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 MAEAQ7L5Y9 396 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 HINFPQ9BQA5 517 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 FBXW4P57775 412 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
TRIM27-205ENST00000481474 SEPT10Q9P0V9 454 aa13.31□□□□□ -0.28
TRIM27-205ENST00000481474 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM27-205ENST00000481474 HAND2P61296 217 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 HIP1O00291 1037 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 CDC45O75419 566 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 KIF5BP33176 963 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 RNF217Q8TC41 542 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 SKA2Q8WVK7 121 aaPredicted RBP13.3□□□□□ -0.28
TRIM27-205ENST00000481474 CACYBPQ9HB71 228 aaKnown RBP13.3□□□□□ -0.28
TRIM27-205ENST00000481474 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
TRIM27-205ENST00000481474 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
TRIM27-205ENST00000481474 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC6Q16204 474 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 CDKL5O76039 1030 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 IFIT3O14879 490 aaKnown RBP13.29□□□□□ -0.28
TRIM27-205ENST00000481474 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 UPF3BQ9BZI7 483 aaKnown RBP13.29□□□□□ -0.28
TRIM27-205ENST00000481474 PRKAG2Q9UGJ0 569 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 DAPK3O43293 454 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 TMTC4Q5T4D3 741 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 SEPT14Q6ZU15 432 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms