RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 AIMP1Q12904 312 aaKnown RBP15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 USPL1Q5W0Q7 1092 aa15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 G2E3Q7L622 706 aa15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 MRPL50Q8N5N7 158 aaKnown RBP15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 ARXQ96QS3 562 aa15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
SHROOM3-205ENST00000481002 CLEC4GQ6UXB4 293 aa15.85■□□□□ 0.13
SHROOM3-205ENST00000481002 KIF6Q6ZMV9 814 aa15.85■□□□□ 0.13
SHROOM3-205ENST00000481002 FLIIQ13045 1269 aa15.84■□□□□ 0.13
SHROOM3-205ENST00000481002 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
SHROOM3-205ENST00000481002 NLGN1Q8N2Q7 840 aa15.84■□□□□ 0.13
SHROOM3-205ENST00000481002 PLBD2Q8NHP8 589 aa15.84■□□□□ 0.13
SHROOM3-205ENST00000481002 ARFGEF2Q9Y6D5 1785 aa15.83■□□□□ 0.12
SHROOM3-205ENST00000481002 HLFQ16534 295 aa15.83■□□□□ 0.12
SHROOM3-205ENST00000481002 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.12
SHROOM3-205ENST00000481002 MTFR1LQ9H019 292 aa15.83■□□□□ 0.12
SHROOM3-205ENST00000481002 SMC4Q9NTJ3 1288 aa15.83■□□□□ 0.12
SHROOM3-205ENST00000481002 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 ZBTB7AO95365 584 aa15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 DDX58O95786 925 aaKnown RBP15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 FKBP8Q14318 412 aa15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
SHROOM3-205ENST00000481002 TM4SF1P30408 202 aa15.81■□□□□ 0.12
SHROOM3-205ENST00000481002 KSR2Q6VAB6 950 aa15.81■□□□□ 0.12
SHROOM3-205ENST00000481002 RIC3Q7Z5B4 369 aa15.81■□□□□ 0.12
SHROOM3-205ENST00000481002 PTPRCP08575 1304 aa15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 PI4KAP2A4QPH2 592 aa15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 BCAR3O75815 825 aa15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 FKBP5Q13451 457 aaPredicted RBP15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 PI4KAP1Q8N8J0 262 aa15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
SHROOM3-205ENST00000481002 ADCY9O60503 1353 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 TCIRG1Q13488 830 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 NFIXQ14938 502 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 HSP90AB3PQ58FF7 597 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 SGIP1Q9BQI5 828 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
SHROOM3-205ENST00000481002 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 ARHGAP45Q92619 1136 aa15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 METTL22Q9BUU2 404 aaPredicted RBP15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 MAP3K2Q9Y2U5 619 aa15.78■□□□□ 0.12
SHROOM3-205ENST00000481002 KIF16BQ96L93 1317 aa15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 MMP10P09238 476 aa15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 PTGER2P43116 358 aa15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 TRIM28Q13263 835 aaKnown RBP15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 SETDB2Q96T68 719 aa15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 ISCA1Q9BUE6 129 aa15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
SHROOM3-205ENST00000481002 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.11
SHROOM3-205ENST00000481002 F6X3S4 739 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 IPO8O15397 1037 aaKnown RBP15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 GPTP24298 496 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 POLD1P28340 1107 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 DDR1Q08345 913 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 PARP10Q53GL7 1025 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 BICDL1Q6ZP65 573 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
SHROOM3-205ENST00000481002 UBN2Q6ZU65 1347 aa15.74■□□□□ 0.11
SHROOM3-205ENST00000481002 NEXNQ0ZGT2 675 aa15.74■□□□□ 0.11
SHROOM3-205ENST00000481002 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
SHROOM3-205ENST00000481002 MYD88Q99836 296 aa15.74■□□□□ 0.11
SHROOM3-205ENST00000481002 API5Q9BZZ5 524 aaKnown RBP15.74■□□□□ 0.11
SHROOM3-205ENST00000481002 PARP3Q9Y6F1 533 aa15.74■□□□□ 0.11
SHROOM3-205ENST00000481002 N4BP2Q86UW6 1770 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-205ENST00000481002 ATP5J2-PTCD1G3V325 749 aa15.73■□□□□ 0.11
SHROOM3-205ENST00000481002 SERPINB2P05120 415 aa15.73■□□□□ 0.11
SHROOM3-205ENST00000481002 IGKV5-2P06315 115 aa15.73■□□□□ 0.11
SHROOM3-205ENST00000481002 BEND3Q5T5X7 828 aa15.73■□□□□ 0.11
SHROOM3-205ENST00000481002 ATF7IPQ6VMQ6 1270 aa15.73■□□□□ 0.11
SHROOM3-205ENST00000481002 SUSD4Q5VX71 490 aa15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 ZKSCAN2Q63HK3 967 aa15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 PPP1R42Q7Z4L9 355 aa15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 LINS1Q8NG48 757 aa15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 IBTKQ9P2D0 1353 aaPredicted RBP15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 LRP5O75197 1615 aa15.72■□□□□ 0.11
SHROOM3-205ENST00000481002 KIF13BQ9NQT8 1826 aa15.71■□□□□ 0.11
SHROOM3-205ENST00000481002 NEURL1BA8MQ27 555 aa15.71■□□□□ 0.11
SHROOM3-205ENST00000481002 TRIM27P14373 513 aa15.71■□□□□ 0.11
SHROOM3-205ENST00000481002 TPTE2Q6XPS3 522 aa15.71■□□□□ 0.11
SHROOM3-205ENST00000481002 NYXQ9GZU5 481 aa15.71■□□□□ 0.11
SHROOM3-205ENST00000481002 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.1
SHROOM3-205ENST00000481002 NTSR2O95665 410 aa15.7■□□□□ 0.1
SHROOM3-205ENST00000481002 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
SHROOM3-205ENST00000481002 SLC4A10Q6U841 1118 aa15.7■□□□□ 0.1
SHROOM3-205ENST00000481002 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
SHROOM3-205ENST00000481002 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms