RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 NHSQ6T4R5 1651 aa14.09□□□□□ -0.15
APTX-223ENST00000479656 TJP1Q07157 1748 aa14.09□□□□□ -0.15
APTX-223ENST00000479656 GNAI2P04899 355 aa14.08□□□□□ -0.16
APTX-223ENST00000479656 CRKLP46109 303 aaKnown RBP14.08□□□□□ -0.16
APTX-223ENST00000479656 ZBTB3Q9H5J0 574 aa14.08□□□□□ -0.16
APTX-223ENST00000479656 BTAF1O14981 1849 aa14.08□□□□□ -0.16
APTX-223ENST00000479656 SBF2Q86WG5 1849 aa14.08□□□□□ -0.16
APTX-223ENST00000479656 TRIM37O94972 964 aa14.08□□□□□ -0.16
APTX-223ENST00000479656 NBPF7P0C2Y1 421 aaPredicted RBP14.08□□□□□ -0.16
APTX-223ENST00000479656 CCDC87Q9NVE4 849 aa14.08□□□□□ -0.16
APTX-223ENST00000479656 ATP5J2-PTCD1G3V325 749 aa14.07□□□□□ -0.16
APTX-223ENST00000479656 UBTFL1P0CB47 393 aaPredicted RBP14.07□□□□□ -0.16
APTX-223ENST00000479656 IL6STP40189 918 aaPredicted RBP14.07□□□□□ -0.16
APTX-223ENST00000479656 RPAP2Q8IXW5 612 aaPredicted RBP14.07□□□□□ -0.16
APTX-223ENST00000479656 C9orf78Q9NZ63 289 aaPredicted RBP14.07□□□□□ -0.16
APTX-223ENST00000479656 NEURL1BA8MQ27 555 aa14.06□□□□□ -0.16
APTX-223ENST00000479656 CEP85Q6P2H3 762 aa14.06□□□□□ -0.16
APTX-223ENST00000479656 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
APTX-223ENST00000479656 ANKRD44Q8N8A2 993 aa14.06□□□□□ -0.16
APTX-223ENST00000479656 LINC00116Q8NCU8 138 aa14.06□□□□□ -0.16
APTX-223ENST00000479656 KIF6Q6ZMV9 814 aa14.06□□□□□ -0.16
APTX-223ENST00000479656 NPM2Q86SE8 214 aaKnown RBP14.06□□□□□ -0.16
APTX-223ENST00000479656 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
APTX-223ENST00000479656 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
APTX-223ENST00000479656 N4BP2Q86UW6 1770 aaPredicted RBP14.05□□□□□ -0.16
APTX-223ENST00000479656 EIF5P55010 431 aaKnown RBP14.05□□□□□ -0.16
APTX-223ENST00000479656 TBC1D2BQ9UPU7 963 aa14.05□□□□□ -0.16
APTX-223ENST00000479656 GRM8O00222 908 aa14.04□□□□□ -0.16
APTX-223ENST00000479656 GCKRQ14397 625 aa14.04□□□□□ -0.16
APTX-223ENST00000479656 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
APTX-223ENST00000479656 HLFQ16534 295 aa14.04□□□□□ -0.16
APTX-223ENST00000479656 DZIP3Q86Y13 1208 aaKnown RBP14.04□□□□□ -0.16
APTX-223ENST00000479656 ATP8B2P98198 1209 aa14.03□□□□□ -0.16
APTX-223ENST00000479656 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
APTX-223ENST00000479656 SMC5Q8IY18 1101 aa14.03□□□□□ -0.16
APTX-223ENST00000479656 JARID2Q92833 1246 aaPredicted RBP14.03□□□□□ -0.16
APTX-223ENST00000479656 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
APTX-223ENST00000479656 UTYO14607 1347 aa14.02□□□□□ -0.16
APTX-223ENST00000479656 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.16
APTX-223ENST00000479656 CICQ96RK0 1608 aaPredicted RBP14.02□□□□□ -0.16
APTX-223ENST00000479656 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.17
APTX-223ENST00000479656 A0A087WZG4 1122 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 GIGYF2Q6Y7W6 1299 aaKnown RBP14.01□□□□□ -0.17
APTX-223ENST00000479656 MYH14Q7Z406 1995 aaKnown RBP14.01□□□□□ -0.17
APTX-223ENST00000479656 CNTNAP4Q9C0A0 1308 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 ERVV-1B6SEH8 477 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 RC3H1Q5TC82 1133 aaKnown RBP14.01□□□□□ -0.17
APTX-223ENST00000479656 SMIM5Q71RC9 77 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 GCC1Q96CN9 775 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 LRRC4BQ9NT99 713 aa14.01□□□□□ -0.17
APTX-223ENST00000479656 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
APTX-223ENST00000479656 NUP188Q5SRE5 1749 aa14□□□□□ -0.17
APTX-223ENST00000479656 CCDC191Q8NCU4 936 aa14□□□□□ -0.17
APTX-223ENST00000479656 KAZALD1Q96I82 304 aa14□□□□□ -0.17
APTX-223ENST00000479656 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
APTX-223ENST00000479656 HDAC5Q9UQL6 1122 aa14□□□□□ -0.17
APTX-223ENST00000479656 IBTKQ9P2D0 1353 aaPredicted RBP14□□□□□ -0.17
APTX-223ENST00000479656 LY75O60449 1722 aa14□□□□□ -0.17
APTX-223ENST00000479656 HMMRO75330 724 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 UBE3BQ7Z3V4 1068 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 PPP1R42Q7Z4L9 355 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 RREB1Q92766 1687 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 H7C1W4 665 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 APBA3O96018 575 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 GPTP24298 496 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 RGS3P49796 1198 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
APTX-223ENST00000479656 RTL5Q5HYW3 569 aaPredicted RBP13.99□□□□□ -0.17
APTX-223ENST00000479656 ANKRD45Q5TZF3 282 aa13.99□□□□□ -0.17
APTX-223ENST00000479656 GNPATO15228 680 aa13.98□□□□□ -0.17
APTX-223ENST00000479656 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
APTX-223ENST00000479656 CASP7P55210 303 aa13.98□□□□□ -0.17
APTX-223ENST00000479656 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
APTX-223ENST00000479656 BICC1Q9H694 974 aaKnown RBP13.98□□□□□ -0.17
APTX-223ENST00000479656 COL15A1P39059 1388 aa13.98□□□□□ -0.17
APTX-223ENST00000479656 AFDNP55196 1824 aaKnown RBP13.98□□□□□ -0.17
APTX-223ENST00000479656 SRGAP3O43295 1099 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 NUCB1Q02818 461 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 SLC27A3Q5K4L6 730 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 PROM2Q8N271 834 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 POLA2Q14181 598 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 TXNRD1Q16881 649 aa13.97□□□□□ -0.17
APTX-223ENST00000479656 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
APTX-223ENST00000479656 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
APTX-223ENST00000479656 EP400Q96L91 3159 aa13.96□□□□□ -0.17
APTX-223ENST00000479656 PLSCR1O15162 318 aa13.96□□□□□ -0.17
APTX-223ENST00000479656 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
APTX-223ENST00000479656 CHD1LQ86WJ1 897 aa13.96□□□□□ -0.17
APTX-223ENST00000479656 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.17
APTX-223ENST00000479656 ZNF34Q8IZ26 560 aa13.96□□□□□ -0.17
APTX-223ENST00000479656 APBB1O00213 710 aa13.95□□□□□ -0.18
APTX-223ENST00000479656 MTX1Q13505 466 aa13.95□□□□□ -0.18
APTX-223ENST00000479656 AK7Q96M32 723 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms