RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 HSPA8P11142 646 aaKnown RBP23.58■■□□□ 1.37
HMGN1-212ENST00000479586 MASTLQ96GX5 879 aa23.58■■□□□ 1.37
HMGN1-212ENST00000479586 ABHD8Q96I13 439 aa23.58■■□□□ 1.37
HMGN1-212ENST00000479586 SETDB2Q96T68 719 aa23.58■■□□□ 1.37
HMGN1-212ENST00000479586 CAMTA2O94983 1202 aa23.57■■□□□ 1.36
HMGN1-212ENST00000479586 ST5P78524 1137 aa23.57■■□□□ 1.36
HMGN1-212ENST00000479586 C7orf43Q8WVR3 580 aa23.57■■□□□ 1.36
HMGN1-212ENST00000479586 IL6STP40189 918 aaPredicted RBP23.56■■□□□ 1.36
HMGN1-212ENST00000479586 CLEC11AQ9Y240 323 aa23.56■■□□□ 1.36
HMGN1-212ENST00000479586 BCORQ6W2J9 1755 aa23.55■■□□□ 1.36
HMGN1-212ENST00000479586 CCDC93Q567U6 631 aa23.55■■□□□ 1.36
HMGN1-212ENST00000479586 RASSF10A6NK89 507 aa23.54■■□□□ 1.36
HMGN1-212ENST00000479586 A1BGP04217 495 aa23.54■■□□□ 1.36
HMGN1-212ENST00000479586 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
HMGN1-212ENST00000479586 ZNF790Q6PG37 636 aa23.54■■□□□ 1.36
HMGN1-212ENST00000479586 ZNF277Q9NRM2 450 aaPredicted RBP23.54■■□□□ 1.36
HMGN1-212ENST00000479586 HACL1Q9UJ83 578 aa23.54■■□□□ 1.36
HMGN1-212ENST00000479586 KNSTRNQ9Y448 316 aa23.54■■□□□ 1.36
HMGN1-212ENST00000479586 EPHX2P34913 555 aa23.53■■□□□ 1.36
HMGN1-212ENST00000479586 DEFB115Q30KQ5 88 aa23.53■■□□□ 1.36
HMGN1-212ENST00000479586 MAP1SQ66K74 1059 aaPredicted RBP23.53■■□□□ 1.36
HMGN1-212ENST00000479586 TEX13AQ9BXU3 409 aaPredicted RBP23.53■■□□□ 1.36
HMGN1-212ENST00000479586 SIPA1L3O60292 1781 aaPredicted RBP23.52■■□□□ 1.36
HMGN1-212ENST00000479586 FKBP4Q02790 459 aaKnown RBP eCLIP23.52■■□□□ 1.36
HMGN1-212ENST00000479586 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
HMGN1-212ENST00000479586 RNF123Q5XPI4 1314 aa23.52■■□□□ 1.36
HMGN1-212ENST00000479586 WDR33Q9C0J8 1336 aaKnown RBP23.52■■□□□ 1.36
HMGN1-212ENST00000479586 CNTROBQ8N137 903 aa23.51■■□□□ 1.35
HMGN1-212ENST00000479586 IL17REQ8NFR9 667 aa23.51■■□□□ 1.35
HMGN1-212ENST00000479586 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
HMGN1-212ENST00000479586 EIF4G2P78344 907 aaKnown RBP eCLIP23.5■■□□□ 1.35
HMGN1-212ENST00000479586 TEFQ10587 303 aa23.5■■□□□ 1.35
HMGN1-212ENST00000479586 AMER1Q5JTC6 1135 aaPredicted RBP23.5■■□□□ 1.35
HMGN1-212ENST00000479586 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
HMGN1-212ENST00000479586 DZIP3Q86Y13 1208 aaKnown RBP23.5■■□□□ 1.35
HMGN1-212ENST00000479586 NPR1P16066 1061 aa23.49■■□□□ 1.35
HMGN1-212ENST00000479586 MAP2K1Q02750 393 aaPredicted RBP23.49■■□□□ 1.35
HMGN1-212ENST00000479586 NBPF5PQ86XG9 351 aaPredicted RBP23.49■■□□□ 1.35
HMGN1-212ENST00000479586 ABT1Q9ULW3 272 aaKnown RBP23.49■■□□□ 1.35
HMGN1-212ENST00000479586 PIP4K2AP48426 406 aaPredicted RBP23.48■■□□□ 1.35
HMGN1-212ENST00000479586 PNMA8AQ86V59 439 aaPredicted RBP23.48■■□□□ 1.35
HMGN1-212ENST00000479586 FMNL2Q96PY5 1086 aa23.48■■□□□ 1.35
HMGN1-212ENST00000479586 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
HMGN1-212ENST00000479586 THSD7BQ9C0I4 1608 aa23.46■■□□□ 1.35
HMGN1-212ENST00000479586 KLRG2A4D1S0 409 aaPredicted RBP23.45■■□□□ 1.34
HMGN1-212ENST00000479586 GNAT3A8MTJ3 354 aa23.45■■□□□ 1.34
HMGN1-212ENST00000479586 FZD9O00144 591 aa23.45■■□□□ 1.34
HMGN1-212ENST00000479586 KCNQ3O43525 872 aa23.45■■□□□ 1.34
HMGN1-212ENST00000479586 CCDC85CA6NKD9 419 aa23.44■■□□□ 1.34
HMGN1-212ENST00000479586 IARSP41252 1262 aaKnown RBP23.44■■□□□ 1.34
HMGN1-212ENST00000479586 RTKN2Q8IZC4 609 aa23.44■■□□□ 1.34
HMGN1-212ENST00000479586 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
HMGN1-212ENST00000479586 FMR1Q06787 632 aaKnown RBP eCLIP23.43■■□□□ 1.34
HMGN1-212ENST00000479586 GPC2Q8N158 579 aa23.43■■□□□ 1.34
HMGN1-212ENST00000479586 SYNE4Q8N205 404 aa23.43■■□□□ 1.34
HMGN1-212ENST00000479586 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
HMGN1-212ENST00000479586 LTBP1Q14766 1721 aa23.42■■□□□ 1.34
HMGN1-212ENST00000479586 MLLT1Q03111 559 aaPredicted RBP23.42■■□□□ 1.34
HMGN1-212ENST00000479586 CLEC4GQ6UXB4 293 aa23.42■■□□□ 1.34
HMGN1-212ENST00000479586 GAS2L2Q8NHY3 880 aa23.42■■□□□ 1.34
HMGN1-212ENST00000479586 PRAMEF22A3QJZ6 481 aa23.41■■□□□ 1.34
HMGN1-212ENST00000479586 PAXIP1Q6ZW49 1069 aaPredicted RBP23.41■■□□□ 1.34
HMGN1-212ENST00000479586 CAPNS2Q96L46 248 aa23.41■■□□□ 1.34
HMGN1-212ENST00000479586 COL4A5P29400 1685 aa23.41■■□□□ 1.34
HMGN1-212ENST00000479586 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
HMGN1-212ENST00000479586 FAM177BA6PVY3 158 aa23.4■■□□□ 1.34
HMGN1-212ENST00000479586 GRM1Q13255 1194 aa23.4■■□□□ 1.34
HMGN1-212ENST00000479586 ZNF652Q9Y2D9 606 aa23.4■■□□□ 1.34
HMGN1-212ENST00000479586 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
HMGN1-212ENST00000479586 SNED1Q8TER0 1413 aa23.4■■□□□ 1.34
HMGN1-212ENST00000479586 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
HMGN1-212ENST00000479586 RGS19P49795 217 aa23.39■■□□□ 1.33
HMGN1-212ENST00000479586 CYP4F22Q6NT55 531 aa23.39■■□□□ 1.33
HMGN1-212ENST00000479586 TPTE2Q6XPS3 522 aa23.39■■□□□ 1.33
HMGN1-212ENST00000479586 NIP7Q9Y221 180 aaKnown RBP eCLIP23.39■■□□□ 1.33
HMGN1-212ENST00000479586 GJA3Q9Y6H8 435 aa23.39■■□□□ 1.33
HMGN1-212ENST00000479586 BEGAINQ9BUH8 593 aa23.38■■□□□ 1.33
HMGN1-212ENST00000479586 TSKSQ9UJT2 592 aa23.38■■□□□ 1.33
HMGN1-212ENST00000479586 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
HMGN1-212ENST00000479586 JDP2Q8WYK2 163 aa23.37■■□□□ 1.33
HMGN1-212ENST00000479586 GPR101Q96P66 508 aaPredicted RBP23.37■■□□□ 1.33
HMGN1-212ENST00000479586 ECE1P42892 770 aa23.36■■□□□ 1.33
HMGN1-212ENST00000479586 PSMD1Q99460 953 aa23.36■■□□□ 1.33
HMGN1-212ENST00000479586 TRAF5O00463 557 aa23.35■■□□□ 1.33
HMGN1-212ENST00000479586 LMOD1P29536 600 aaPredicted RBP23.35■■□□□ 1.33
HMGN1-212ENST00000479586 ALDH1B1P30837 517 aa23.35■■□□□ 1.33
HMGN1-212ENST00000479586 EPS15P42566 896 aa23.35■■□□□ 1.33
HMGN1-212ENST00000479586 SCNN1DP51172 638 aa23.35■■□□□ 1.33
HMGN1-212ENST00000479586 CC2D1BQ5T0F9 858 aaKnown RBP23.35■■□□□ 1.33
HMGN1-212ENST00000479586 CST9Q5W186 159 aa23.35■■□□□ 1.33
HMGN1-212ENST00000479586 TRPM7Q96QT4 1865 aa23.34■■□□□ 1.33
HMGN1-212ENST00000479586 EIF6P56537 245 aaKnown RBP23.34■■□□□ 1.33
HMGN1-212ENST00000479586 ABCC12Q96J65 1359 aa23.33■■□□□ 1.33
HMGN1-212ENST00000479586 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
HMGN1-212ENST00000479586 AOC2O75106 756 aa23.33■■□□□ 1.33
HMGN1-212ENST00000479586 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
HMGN1-212ENST00000479586 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
HMGN1-212ENST00000479586 HLFQ16534 295 aa23.32■■□□□ 1.32
HMGN1-212ENST00000479586 SLC51AQ86UW1 340 aa23.32■■□□□ 1.32
HMGN1-212ENST00000479586 TLL2Q9Y6L7 1015 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms