RNA–Protein interactions for RNA: ENST00000478320.1

AGAP3-215, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 2

Gene AGAP3, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-215	ENST00000478320	FER1L6	Q2WGJ9	1857 aa		13.78	□□□□□ -0.2
AGAP3-215	ENST00000478320	A1BG	P04217	495 aa		13.77	□□□□□ -0.21
AGAP3-215	ENST00000478320	IL17RE	Q8NFR9	667 aa		13.77	□□□□□ -0.21
AGAP3-215	ENST00000478320	MASTL	Q96GX5	879 aa		13.77	□□□□□ -0.21
AGAP3-215	ENST00000478320	NUDC	Q9Y266	331 aa		13.77	□□□□□ -0.21
AGAP3-215	ENST00000478320	COL3A1	P02461	1466 aa	Predicted RBP	13.76	□□□□□ -0.21
AGAP3-215	ENST00000478320	CAMTA2	O94983	1202 aa		13.76	□□□□□ -0.21
AGAP3-215	ENST00000478320	PRKAR2B	P31323	418 aa		13.76	□□□□□ -0.21
AGAP3-215	ENST00000478320	CCDC93	Q567U6	631 aa		13.76	□□□□□ -0.21
AGAP3-215	ENST00000478320	CREBZF	Q9NS37	354 aa		13.76	□□□□□ -0.21
AGAP3-215	ENST00000478320	SIPA1L3	O60292	1781 aa	Predicted RBP	13.76	□□□□□ -0.21
AGAP3-215	ENST00000478320	NPC1L1	Q9UHC9	1359 aa		13.75	□□□□□ -0.21
AGAP3-215	ENST00000478320	DDN	O94850	711 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-215	ENST00000478320	SRGN	P10124	158 aa		13.75	□□□□□ -0.21
AGAP3-215	ENST00000478320	MKRN1	Q9UHC7	482 aa	Known RBP	13.75	□□□□□ -0.21
AGAP3-215	ENST00000478320	BCOR	Q6W2J9	1755 aa		13.75	□□□□□ -0.21
AGAP3-215	ENST00000478320	SLX4	Q8IY92	1834 aa		13.74	□□□□□ -0.21
AGAP3-215	ENST00000478320	GTF2E1	P29083	439 aa	Predicted RBP	13.74	□□□□□ -0.21
AGAP3-215	ENST00000478320	AIDA	Q96BJ3	306 aa		13.74	□□□□□ -0.21
AGAP3-215	ENST00000478320	ARFGEF2	Q9Y6D5	1785 aa		13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	CEMIP	Q8WUJ3	1361 aa		13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	PER1	O15534	1290 aa	Predicted RBP	13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	NEFM	P07197	916 aa		13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	SNRPA1	P09661	255 aa	Known RBP	13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	NPR1	P16066	1061 aa		13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	PIP4K2A	P48426	406 aa	Predicted RBP	13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	EAPP	Q56P03	285 aa	Predicted RBP	13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	CLEC4G	Q6UXB4	293 aa		13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	LDHD	Q86WU2	507 aa		13.73	□□□□□ -0.21
AGAP3-215	ENST00000478320	FAM177B	A6PVY3	158 aa		13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	POTEC	B2RU33	542 aa		13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	TPTE2	Q6XPS3	522 aa		13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	CLEC11A	Q9Y240	323 aa		13.72	□□□□□ -0.21
AGAP3-215	ENST00000478320	KCNQ3	O43525	872 aa		13.71	□□□□□ -0.21
AGAP3-215	ENST00000478320	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
AGAP3-215	ENST00000478320	RTKN2	Q8IZC4	609 aa		13.71	□□□□□ -0.21
AGAP3-215	ENST00000478320	SCN4A	P35499	1836 aa		13.71	□□□□□ -0.22
AGAP3-215	ENST00000478320	POTEI	P0CG38	1075 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	POTEJ	P0CG39	1038 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	MCM10	Q7L590	875 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	PHACTR3	Q96KR7	559 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	RSPH6A	Q9H0K4	717 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	HACL1	Q9UJ83	578 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	USP16	Q9Y5T5	823 aa		13.7	□□□□□ -0.22
AGAP3-215	ENST00000478320	ALDH1B1	P30837	517 aa		13.69	□□□□□ -0.22
AGAP3-215	ENST00000478320	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.69	□□□□□ -0.22
AGAP3-215	ENST00000478320	CNTNAP1	P78357	1384 aa		13.69	□□□□□ -0.22
AGAP3-215	ENST00000478320	TMEM88B	A6NKF7	163 aa		13.68	□□□□□ -0.22
AGAP3-215	ENST00000478320	JDP2	Q8WYK2	163 aa		13.68	□□□□□ -0.22
AGAP3-215	ENST00000478320	NYX	Q9GZU5	481 aa		13.68	□□□□□ -0.22
AGAP3-215	ENST00000478320	ZNF541	Q9H0D2	1346 aa		13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	PRAMEF22	A3QJZ6	481 aa		13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	RGL2	O15211	777 aa		13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	LMOD1	P29536	600 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	KIF6	Q6ZMV9	814 aa		13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	PNMA8A	Q86V59	439 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	RPGR	Q92834	1020 aa	Known RBP	13.67	□□□□□ -0.22
AGAP3-215	ENST00000478320	EPHX2	P34913	555 aa		13.66	□□□□□ -0.22
AGAP3-215	ENST00000478320	IARS	P41252	1262 aa	Known RBP	13.66	□□□□□ -0.22
AGAP3-215	ENST00000478320	CTCF	P49711	727 aa	Predicted RBP	13.66	□□□□□ -0.22
AGAP3-215	ENST00000478320	NGEF	Q8N5V2	710 aa		13.66	□□□□□ -0.22
AGAP3-215	ENST00000478320	TMX4	Q9H1E5	349 aa	Predicted RBP	13.66	□□□□□ -0.22
AGAP3-215	ENST00000478320	RNF123	Q5XPI4	1314 aa		13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	PASK	Q96RG2	1323 aa		13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	FOXN1	O15353	648 aa		13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	HTATSF1	O43719	755 aa	Known RBP	13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	EIF6	P56537	245 aa	Known RBP	13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	DCTN1	Q14203	1278 aa		13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	TAF7	Q15545	349 aa	Predicted RBP	13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	SYNE4	Q8N205	404 aa		13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	C7orf43	Q8WVR3	580 aa		13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	ABT1	Q9ULW3	272 aa	Known RBP	13.65	□□□□□ -0.22
AGAP3-215	ENST00000478320	LAMB4	A4D0S4	1761 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	NBPF26	B4DH59	902 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	NBPF10	Q6P3W6	841 aa	Known RBP	13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	OLFM4	Q6UX06	510 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	GPC2	Q8N158	579 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	NBPF15	Q8N660	670 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	PNISR	Q8TF01	805 aa	Known RBP	13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	PRDM10	Q9NQV6	1147 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	GJA3	Q9Y6H8	435 aa		13.64	□□□□□ -0.23
AGAP3-215	ENST00000478320	KLRG2	A4D1S0	409 aa	Predicted RBP	13.63	□□□□□ -0.23
AGAP3-215	ENST00000478320	PPP2R1A	P30153	589 aa		13.63	□□□□□ -0.23
AGAP3-215	ENST00000478320	VEGFB	P49765	207 aa		13.63	□□□□□ -0.23
AGAP3-215	ENST00000478320	CC2D2B	Q6DHV5	1058 aa		13.63	□□□□□ -0.23
AGAP3-215	ENST00000478320	HLF	Q16534	295 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	GRIPAP1	Q4V328	841 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	MAP1S	Q66K74	1059 aa	Predicted RBP	13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	NUTM1	Q86Y26	1132 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	CNTROB	Q8N137	903 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	LARGE2	Q8N3Y3	721 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	PSMD1	Q99460	953 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	BEGAIN	Q9BUH8	593 aa		13.62	□□□□□ -0.23
AGAP3-215	ENST00000478320	RRP7A	Q9Y3A4	280 aa	Known RBP	13.62	□□□□□ -0.23

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