RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 NEURL1BA8MQ27 555 aa10.84□□□□□ -0.67
CDHR3-211ENST00000478080 TRAK2O60296 914 aa10.84□□□□□ -0.67
CDHR3-211ENST00000478080 ZGPATQ8N5A5 531 aaKnown RBP10.84□□□□□ -0.67
CDHR3-211ENST00000478080 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
CDHR3-211ENST00000478080 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
CDHR3-211ENST00000478080 NEK4P51957 841 aa10.84□□□□□ -0.67
CDHR3-211ENST00000478080 PKP1Q13835 747 aa10.84□□□□□ -0.67
CDHR3-211ENST00000478080 LARP1Q6PKG0 1096 aaKnown RBP10.84□□□□□ -0.67
CDHR3-211ENST00000478080 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
CDHR3-211ENST00000478080 DDX54Q8TDD1 881 aaKnown RBP10.84□□□□□ -0.67
CDHR3-211ENST00000478080 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
CDHR3-211ENST00000478080 AOX1Q06278 1338 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
CDHR3-211ENST00000478080 WDR17Q8IZU2 1322 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
CDHR3-211ENST00000478080 ST18O60284 1047 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 SASH1O94885 1247 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 GCKRQ14397 625 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 HSP90AB4PQ58FF6 505 aa10.83□□□□□ -0.68
CDHR3-211ENST00000478080 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
CDHR3-211ENST00000478080 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
CDHR3-211ENST00000478080 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
CDHR3-211ENST00000478080 UTYO14607 1347 aa10.82□□□□□ -0.68
CDHR3-211ENST00000478080 NEXNQ0ZGT2 675 aa10.82□□□□□ -0.68
CDHR3-211ENST00000478080 AACSQ86V21 672 aa10.82□□□□□ -0.68
CDHR3-211ENST00000478080 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
CDHR3-211ENST00000478080 PKD1L3Q7Z443 1732 aa10.82□□□□□ -0.68
CDHR3-211ENST00000478080 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
CDHR3-211ENST00000478080 UPF3BQ9BZI7 483 aaKnown RBP10.82□□□□□ -0.68
CDHR3-211ENST00000478080 TLR7Q9NYK1 1049 aaKnown RBP10.82□□□□□ -0.68
CDHR3-211ENST00000478080 MRC1P22897 1456 aa10.82□□□□□ -0.68
CDHR3-211ENST00000478080 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
CDHR3-211ENST00000478080 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
CDHR3-211ENST00000478080 NBPF14Q5TI25 921 aa10.81□□□□□ -0.68
CDHR3-211ENST00000478080 NBPF10Q6P3W6 841 aaKnown RBP10.81□□□□□ -0.68
CDHR3-211ENST00000478080 NBPF15Q8N660 670 aa10.81□□□□□ -0.68
CDHR3-211ENST00000478080 EAF2Q96CJ1 260 aaPredicted RBP10.81□□□□□ -0.68
CDHR3-211ENST00000478080 CNTROBQ8N137 903 aa10.81□□□□□ -0.68
CDHR3-211ENST00000478080 COL5A2P05997 1499 aaPredicted RBP10.81□□□□□ -0.68
CDHR3-211ENST00000478080 A1BGP04217 495 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 EVA1CP58658 441 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 G3BP1Q13283 466 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDHR3-211ENST00000478080 UBE3BQ7Z3V4 1068 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 SGSM2O43147 1006 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 GLRX3O76003 335 aaKnown RBP10.8□□□□□ -0.68
CDHR3-211ENST00000478080 MCCP23508 829 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 CHAMP1Q96JM3 812 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 ECHDC1Q9NTX5 307 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 PCDH11XQ9BZA7 1347 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 PCDH11YQ9BZA8 1340 aa10.8□□□□□ -0.68
CDHR3-211ENST00000478080 IL2RBP14784 551 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 TTLL7Q6ZT98 887 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 GBP4Q96PP9 640 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 TTC41PQ6P2S7 1318 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 USP42Q9H9J4 1324 aaKnown RBP10.79□□□□□ -0.68
CDHR3-211ENST00000478080 ABCC6O95255 1503 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 FOXD4L5Q5VV16 416 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-211ENST00000478080 FOXD4L4Q8WXT5 416 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-211ENST00000478080 HDAC5Q9UQL6 1122 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 GLI3P10071 1580 aa10.79□□□□□ -0.68
CDHR3-211ENST00000478080 A0A087WZG4 1122 aa10.78□□□□□ -0.68
CDHR3-211ENST00000478080 HSPA4P34932 840 aa10.78□□□□□ -0.68
CDHR3-211ENST00000478080 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
CDHR3-211ENST00000478080 LARP6Q9BRS8 491 aaKnown RBP10.78□□□□□ -0.68
CDHR3-211ENST00000478080 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
CDHR3-211ENST00000478080 RASEFQ8IZ41 740 aa10.78□□□□□ -0.68
CDHR3-211ENST00000478080 CARD10Q9BWT7 1032 aa10.78□□□□□ -0.68
CDHR3-211ENST00000478080 BOLA2Q9H3K6 86 aa10.78□□□□□ -0.68
CDHR3-211ENST00000478080 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.68
CDHR3-211ENST00000478080 PTH1RQ03431 593 aa10.77□□□□□ -0.68
CDHR3-211ENST00000478080 DIAPH3Q9NSV4 1193 aa10.77□□□□□ -0.68
CDHR3-211ENST00000478080 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.68
CDHR3-211ENST00000478080 CPA1P15085 419 aa10.77□□□□□ -0.69
CDHR3-211ENST00000478080 ANAPC15P60006 121 aa10.77□□□□□ -0.69
CDHR3-211ENST00000478080 PLBD2Q8NHP8 589 aa10.77□□□□□ -0.69
CDHR3-211ENST00000478080 PANK2Q9BZ23 570 aa10.77□□□□□ -0.69
CDHR3-211ENST00000478080 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
CDHR3-211ENST00000478080 RAD50Q92878 1312 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 AFDNP55196 1824 aaKnown RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 CYP2E1P05181 493 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 RFX5P48382 616 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 PTPN12Q05209 780 aaKnown RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 EDC3Q96F86 508 aaKnown RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 FAM227BQ96M60 508 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 SNX14Q9Y5W7 946 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 NDUFB9Q9Y6M9 179 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 PARP4Q9UKK3 1724 aaKnown RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 ARFGEF2Q9Y6D5 1785 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 ERVV-2B6SEH9 535 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 MCTP1Q6DN14 999 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
CDHR3-211ENST00000478080 ABCA3Q99758 1704 aa10.76□□□□□ -0.69
CDHR3-211ENST00000478080 DTNBO60941 627 aa10.75□□□□□ -0.69
CDHR3-211ENST00000478080 CASP7P55210 303 aa10.75□□□□□ -0.69
CDHR3-211ENST00000478080 TFCP2Q12800 502 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms