RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
MINDY3-206ENST00000477891 SASH1O94885 1247 aa12.79□□□□□ -0.36
MINDY3-206ENST00000477891 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
MINDY3-206ENST00000477891 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
MINDY3-206ENST00000477891 LMBRD1Q9NUN5 540 aa12.79□□□□□ -0.36
MINDY3-206ENST00000477891 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
MINDY3-206ENST00000477891 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
MINDY3-206ENST00000477891 CUL4AQ13619 759 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
MINDY3-206ENST00000477891 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
MINDY3-206ENST00000477891 LSG1Q9H089 658 aaKnown RBP12.78□□□□□ -0.36
MINDY3-206ENST00000477891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
MINDY3-206ENST00000477891 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 ADAMTS7Q9UKP4 1686 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
MINDY3-206ENST00000477891 PTMSP20962 102 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 MCM2P49736 904 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 HSPA2P54652 639 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 KLHL40Q2TBA0 621 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
MINDY3-206ENST00000477891 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
MINDY3-206ENST00000477891 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.36
MINDY3-206ENST00000477891 EPHA10Q5JZY3 1008 aa12.77□□□□□ -0.36
MINDY3-206ENST00000477891 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.36
MINDY3-206ENST00000477891 EAF2Q96CJ1 260 aaPredicted RBP12.77□□□□□ -0.36
MINDY3-206ENST00000477891 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.36
MINDY3-206ENST00000477891 STRCP1A6NGW2 1772 aa12.77□□□□□ -0.37
MINDY3-206ENST00000477891 RAD50Q92878 1312 aa12.77□□□□□ -0.37
MINDY3-206ENST00000477891 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
MINDY3-206ENST00000477891 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
MINDY3-206ENST00000477891 AACSQ86V21 672 aa12.77□□□□□ -0.37
MINDY3-206ENST00000477891 DCAF5Q96JK2 942 aa12.77□□□□□ -0.37
MINDY3-206ENST00000477891 SNX14Q9Y5W7 946 aa12.77□□□□□ -0.37
MINDY3-206ENST00000477891 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 PRPF40AO75400 957 aaKnown RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 GCKRQ14397 625 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 MYD88Q99836 296 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 SIL1Q9H173 461 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 PTH1RQ03431 593 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
MINDY3-206ENST00000477891 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 METTL22Q9BUU2 404 aaPredicted RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 TLR7Q9NYK1 1049 aaKnown RBP12.76□□□□□ -0.37
MINDY3-206ENST00000477891 COL18A1P39060 1754 aa12.75□□□□□ -0.37
MINDY3-206ENST00000477891 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
MINDY3-206ENST00000477891 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
MINDY3-206ENST00000477891 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
MINDY3-206ENST00000477891 NEXNQ0ZGT2 675 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 INTS4Q96HW7 963 aaKnown RBP12.74□□□□□ -0.37
MINDY3-206ENST00000477891 ISY1Q9ULR0 285 aaKnown RBP12.74□□□□□ -0.37
MINDY3-206ENST00000477891 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 BRD1O95696 1058 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 CPA1P15085 419 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
MINDY3-206ENST00000477891 CABP4P57796 275 aa12.73□□□□□ -0.37
MINDY3-206ENST00000477891 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
MINDY3-206ENST00000477891 TTC14Q96N46 770 aa12.73□□□□□ -0.37
MINDY3-206ENST00000477891 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
MINDY3-206ENST00000477891 DCCP43146 1447 aa12.73□□□□□ -0.37
MINDY3-206ENST00000477891 C5P01031 1676 aa12.73□□□□□ -0.37
MINDY3-206ENST00000477891 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
MINDY3-206ENST00000477891 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
MINDY3-206ENST00000477891 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
MINDY3-206ENST00000477891 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 FAM227BQ96M60 508 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 BOLA2Q9H3K6 86 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
MINDY3-206ENST00000477891 AK2P54819 239 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 ADCK5Q3MIX3 580 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 CRYBG1Q9Y4K1 1723 aa12.72□□□□□ -0.37
MINDY3-206ENST00000477891 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
MINDY3-206ENST00000477891 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
MINDY3-206ENST00000477891 DTNBO60941 627 aa12.71□□□□□ -0.38
MINDY3-206ENST00000477891 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.38
MINDY3-206ENST00000477891 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.38
MINDY3-206ENST00000477891 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.38
MINDY3-206ENST00000477891 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.38
MINDY3-206ENST00000477891 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.38
MINDY3-206ENST00000477891 RUFY2Q8WXA3 655 aa12.71□□□□□ -0.38
MINDY3-206ENST00000477891 CPDO75976 1380 aa12.7□□□□□ -0.38
MINDY3-206ENST00000477891 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
MINDY3-206ENST00000477891 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 RFX5P48382 616 aaPredicted RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
MINDY3-206ENST00000477891 NBPF14Q5TI25 921 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms