RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 COG6Q9Y2V7 657 aa5.38□□□□□ -1.55
CACUL1-202ENST00000477583 GPC6Q9Y625 555 aaPredicted RBP5.38□□□□□ -1.55
CACUL1-202ENST00000477583 EML1O00423 815 aa5.37□□□□□ -1.55
CACUL1-202ENST00000477583 EPHA4P54764 986 aa5.37□□□□□ -1.55
CACUL1-202ENST00000477583 PRRT3Q5FWE3 981 aa5.37□□□□□ -1.55
CACUL1-202ENST00000477583 TBCELQ5QJ74 424 aa5.37□□□□□ -1.55
CACUL1-202ENST00000477583 TNS4Q8IZW8 715 aa5.37□□□□□ -1.55
CACUL1-202ENST00000477583 SERTM1A2A2V5 107 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 USP17L5A8MUK1 530 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 SIN3BO75182 1162 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 ITGB7P26010 798 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 DEPDC4Q8N2C3 294 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 RHPN1Q8TCX5 695 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 MDFIQ99750 246 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 ALG2Q9H553 416 aa5.36□□□□□ -1.55
CACUL1-202ENST00000477583 ADARB2-AS1A8MUL3 147 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 M0R082 166 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 APBA3O96018 575 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 SFSWAPQ12872 951 aaKnown RBP5.35□□□□□ -1.55
CACUL1-202ENST00000477583 NEUROD1Q13562 356 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 SH3PXD2AQ5TCZ1 1133 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 TRIM50Q86XT4 487 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 TPCN2Q8NHX9 752 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 ZNF417Q8TAU3 575 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 TNFRSF25Q93038 417 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 ZNF587Q96SQ5 575 aaPredicted RBP5.35□□□□□ -1.55
CACUL1-202ENST00000477583 SLC30A3Q99726 388 aa5.35□□□□□ -1.55
CACUL1-202ENST00000477583 ALBP02768 609 aa5.34□□□□□ -1.55
CACUL1-202ENST00000477583 SPEM2Q0P670 501 aa5.34□□□□□ -1.55
CACUL1-202ENST00000477583 ZMYM1Q5SVZ6 1142 aa5.34□□□□□ -1.55
CACUL1-202ENST00000477583 RAB44Q7Z6P3 723 aaPredicted RBP5.34□□□□□ -1.55
CACUL1-202ENST00000477583 BRD7Q9NPI1 651 aa5.34□□□□□ -1.55
CACUL1-202ENST00000477583 CHMP3Q9Y3E7 222 aa5.34□□□□□ -1.55
CACUL1-202ENST00000477583 FAM229AH3BQW9 127 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 ADH7P40394 386 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 ATP1A2P50993 1020 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 PSMA6P60900 246 aaKnown RBP5.33□□□□□ -1.56
CACUL1-202ENST00000477583 C7orf43Q8WVR3 580 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 HSH2DQ96JZ2 352 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 NACC1Q96RE7 527 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 PRDM6Q9NQX0 595 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 TIMELESSQ9UNS1 1208 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 STARD13Q9Y3M8 1113 aa5.33□□□□□ -1.56
CACUL1-202ENST00000477583 USP17L3A6NCW0 530 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 USP17L4A6NCW7 530 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 HIRAP54198 1017 aaPredicted RBP5.32□□□□□ -1.56
CACUL1-202ENST00000477583 FLIIQ13045 1269 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 TRIM28Q13263 835 aaKnown RBP5.32□□□□□ -1.56
CACUL1-202ENST00000477583 RSPO4Q2I0M5 234 aaPredicted RBP5.32□□□□□ -1.56
CACUL1-202ENST00000477583 C1orf53Q5VUE5 145 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 CCDC102BQ68D86 513 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 USP17L2Q6R6M4 530 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 C8orf86Q6ZUL3 223 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 USP17L1Q7RTZ2 530 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 C14orf37Q86TY3 774 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 MICALL1Q8N3F8 863 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 POM121Q96HA1 1249 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 CEP63Q96MT8 703 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 PHACTR1Q9C0D0 580 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 TSPAN10Q9H1Z9 355 aaPredicted RBP5.32□□□□□ -1.56
CACUL1-202ENST00000477583 TPSG1Q9NRR2 321 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 ANKIB1Q9P2G1 1089 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 KIAA1024Q9UPX6 916 aa5.32□□□□□ -1.56
CACUL1-202ENST00000477583 RAD21O60216 631 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 NID1P14543 1247 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 TYRO3Q06418 890 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 COL9A3Q14050 684 aaPredicted RBP5.31□□□□□ -1.56
CACUL1-202ENST00000477583 NKAPLQ5M9Q1 402 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 PLEKHM2Q8IWE5 1019 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 KCNH4Q9UQ05 1017 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 HCN4Q9Y3Q4 1203 aa5.31□□□□□ -1.56
CACUL1-202ENST00000477583 SCO2A0A1W2PP80 73 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 POM121CA8CG34 1229 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 SFI1A8K8P3 1242 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 ZBTB7BO15156 539 aaPredicted RBP5.3□□□□□ -1.56
CACUL1-202ENST00000477583 KCNQ4P56696 695 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 CLDN10P78369 228 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 TBC1D8BQ0IIM8 1120 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 GRIK4Q16099 956 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 ADAMTS19Q8TE59 1207 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
CACUL1-202ENST00000477583 M0R2N6 131 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 DYRK3O43781 588 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 ATP9BO43861 1147 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 PPP1R12BO60237 982 aaPredicted RBP5.29□□□□□ -1.56
CACUL1-202ENST00000477583 LILRB5O75023 590 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 POTEAQ6S8J7 498 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 OGFOD1Q8N543 542 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 ZNF280CQ8ND82 737 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 BHMTQ93088 406 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 SUSD3Q96L08 255 aa5.29□□□□□ -1.56
CACUL1-202ENST00000477583 UBE2OQ9C0C9 1292 aaKnown RBP5.29□□□□□ -1.56
CACUL1-202ENST00000477583 RBM19Q9Y4C8 960 aaKnown RBP5.29□□□□□ -1.56
CACUL1-202ENST00000477583 PALM3A6NDB9 673 aaPredicted RBP5.28□□□□□ -1.56
CACUL1-202ENST00000477583 HIF1AQ16665 826 aa5.28□□□□□ -1.56
CACUL1-202ENST00000477583 TRAPPC3LQ5T215 181 aa5.28□□□□□ -1.56
CACUL1-202ENST00000477583 C20orf204Q6ZNR8 217 aa5.28□□□□□ -1.56
CACUL1-202ENST00000477583 SIX5Q8N196 739 aa5.28□□□□□ -1.56
CACUL1-202ENST00000477583 LARGE2Q8N3Y3 721 aa5.28□□□□□ -1.56
CACUL1-202ENST00000477583 TSEN2Q8NCE0 465 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms