RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PDZRN3Q9UPQ7 1066 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
RTFDC1-206ENST00000477485 PCNTO95613 3336 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 FAM177BA6PVY3 158 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 POTECB2RU33 542 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 A1BGP04217 495 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 POTEIP0CG38 1075 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 POTEJP0CG39 1038 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 IL6STP40189 918 aaPredicted RBP8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 PRPF40BQ6NWY9 871 aaKnown RBP8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 NBPF5PQ86XG9 351 aaPredicted RBP8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 CREBZFQ9NS37 354 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 LAMB4A4D0S4 1761 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 KIF7Q2M1P5 1343 aa8.98□□□□□ -0.97
RTFDC1-206ENST00000477485 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
RTFDC1-206ENST00000477485 BTBD11A6QL63 1104 aa8.97□□□□□ -0.97
RTFDC1-206ENST00000477485 SOGA3Q5TF21 947 aa8.97□□□□□ -0.97
RTFDC1-206ENST00000477485 STYK1Q6J9G0 422 aa8.97□□□□□ -0.97
RTFDC1-206ENST00000477485 AIDAQ96BJ3 306 aa8.97□□□□□ -0.97
RTFDC1-206ENST00000477485 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
RTFDC1-206ENST00000477485 NUP98P52948 1817 aa8.96□□□□□ -0.97
RTFDC1-206ENST00000477485 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
RTFDC1-206ENST00000477485 MASTLQ96GX5 879 aa8.96□□□□□ -0.98
RTFDC1-206ENST00000477485 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
RTFDC1-206ENST00000477485 LTBP3Q9NS15 1303 aa8.96□□□□□ -0.98
RTFDC1-206ENST00000477485 COL3A1P02461 1466 aaPredicted RBP8.96□□□□□ -0.98
RTFDC1-206ENST00000477485 KCNQ3O43525 872 aa8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 CAMTA2O94983 1202 aa8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 SRGNP10124 158 aa8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 GTF2E1P29083 439 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 PRKAR2BP31323 418 aa8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 CCDC93Q567U6 631 aa8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 LDHDQ86WU2 507 aa8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 ZNF277Q9NRM2 450 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-206ENST00000477485 TRPM7Q96QT4 1865 aa8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 PRAMEF22A3QJZ6 481 aa8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 FOXN1O15353 648 aa8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 RTF1Q92541 710 aaKnown RBP8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 CFAP53Q96M91 514 aa8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 ZNF541Q9H0D2 1346 aa8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 CNTNAP1P78357 1384 aa8.94□□□□□ -0.98
RTFDC1-206ENST00000477485 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 NPR1P16066 1061 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 GRM1Q13255 1194 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 OLFM4Q6UX06 510 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 MCM10Q7L590 875 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 NGEFQ8N5V2 710 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 TAF1DQ9H5J8 278 aaPredicted RBP8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 HACL1Q9UJ83 578 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 ABT1Q9ULW3 272 aaKnown RBP8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 USP16Q9Y5T5 823 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 RNF123Q5XPI4 1314 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 ADAMTSL1Q8N6G6 1762 aa8.93□□□□□ -0.98
RTFDC1-206ENST00000477485 EPHX2P34913 555 aa8.92□□□□□ -0.98
RTFDC1-206ENST00000477485 CTCFP49711 727 aaPredicted RBP8.92□□□□□ -0.98
RTFDC1-206ENST00000477485 VEGFBP49765 207 aa8.92□□□□□ -0.98
RTFDC1-206ENST00000477485 TPTE2Q6XPS3 522 aa8.92□□□□□ -0.98
RTFDC1-206ENST00000477485 PHACTR3Q96KR7 559 aa8.92□□□□□ -0.98
RTFDC1-206ENST00000477485 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
RTFDC1-206ENST00000477485 KDM3BQ7LBC6 1761 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 CEMIPQ8WUJ3 1361 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 PASKQ96RG2 1323 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 TCERG1O14776 1098 aaKnown RBP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 SNRPA1P09661 255 aaKnown RBP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 U2AF1L5P0DN76 240 aaPredicted RBP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 LMOD1P29536 600 aaPredicted RBP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 IARSP41252 1262 aaKnown RBP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 LBX1P52954 281 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 U2AF1Q01081 240 aaKnown RBP eCLIP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 MAP1SQ66K74 1059 aaPredicted RBP8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 CLEC4GQ6UXB4 293 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 RTKN2Q8IZC4 609 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 SYNE4Q8N205 404 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 JDP2Q8WYK2 163 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 NUDCQ9Y266 331 aa8.91□□□□□ -0.98
RTFDC1-206ENST00000477485 PER1O15534 1290 aaPredicted RBP8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 ALDH1B1P30837 517 aa8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 EIF6P56537 245 aaKnown RBP8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 DCTN1Q14203 1278 aa8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 DEFB115Q30KQ5 88 aa8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 PNMA8AQ86V59 439 aaPredicted RBP8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 CNTROBQ8N137 903 aa8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 RPGRQ92834 1020 aaKnown RBP8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
RTFDC1-206ENST00000477485 LTBP1Q14766 1721 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 NEFMP07197 916 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 KIF6Q6ZMV9 814 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 PRDM10Q9NQV6 1147 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 LAMB2P55268 1798 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 ANKRD36CQ5JPF3 1778 aa8.89□□□□□ -0.99
RTFDC1-206ENST00000477485 NBPF26B4DH59 902 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms