RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
ITGB5-206ENST00000476988 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
ITGB5-206ENST00000476988 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
ITGB5-206ENST00000476988 KIF7Q2M1P5 1343 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
ITGB5-206ENST00000476988 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
ITGB5-206ENST00000476988 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 CLEC4GQ6UXB4 293 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
ITGB5-206ENST00000476988 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 ZNF496Q96IT1 587 aaPredicted RBP13.66□□□□□ -0.22
ITGB5-206ENST00000476988 MRC1P22897 1456 aa13.66□□□□□ -0.22
ITGB5-206ENST00000476988 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
ITGB5-206ENST00000476988 TJP1Q07157 1748 aa13.65□□□□□ -0.22
ITGB5-206ENST00000476988 HTRA3P83110 453 aa13.65□□□□□ -0.22
ITGB5-206ENST00000476988 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
ITGB5-206ENST00000476988 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
ITGB5-206ENST00000476988 LTBP3Q9NS15 1303 aa13.64□□□□□ -0.23
ITGB5-206ENST00000476988 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
ITGB5-206ENST00000476988 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
ITGB5-206ENST00000476988 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
ITGB5-206ENST00000476988 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
ITGB5-206ENST00000476988 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
ITGB5-206ENST00000476988 NPC1L1Q9UHC9 1359 aa13.63□□□□□ -0.23
ITGB5-206ENST00000476988 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
ITGB5-206ENST00000476988 ALDH1B1P30837 517 aa13.63□□□□□ -0.23
ITGB5-206ENST00000476988 CCDC93Q567U6 631 aa13.63□□□□□ -0.23
ITGB5-206ENST00000476988 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
ITGB5-206ENST00000476988 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
ITGB5-206ENST00000476988 NFKBIEO00221 500 aa13.62□□□□□ -0.23
ITGB5-206ENST00000476988 RGL2O15211 777 aa13.62□□□□□ -0.23
ITGB5-206ENST00000476988 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
ITGB5-206ENST00000476988 NPR1P16066 1061 aa13.62□□□□□ -0.23
ITGB5-206ENST00000476988 COL13A1Q5TAT6 717 aaPredicted RBP13.62□□□□□ -0.23
ITGB5-206ENST00000476988 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
ITGB5-206ENST00000476988 AIDAQ96BJ3 306 aa13.62□□□□□ -0.23
ITGB5-206ENST00000476988 A1BGP04217 495 aa13.61□□□□□ -0.23
ITGB5-206ENST00000476988 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
ITGB5-206ENST00000476988 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
ITGB5-206ENST00000476988 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
ITGB5-206ENST00000476988 SRGNP10124 158 aa13.61□□□□□ -0.23
ITGB5-206ENST00000476988 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
ITGB5-206ENST00000476988 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
ITGB5-206ENST00000476988 PRPF40BQ6NWY9 871 aaKnown RBP13.61□□□□□ -0.23
ITGB5-206ENST00000476988 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
ITGB5-206ENST00000476988 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
ITGB5-206ENST00000476988 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
ITGB5-206ENST00000476988 PNMA8AQ86V59 439 aaPredicted RBP13.6□□□□□ -0.23
ITGB5-206ENST00000476988 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
ITGB5-206ENST00000476988 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
ITGB5-206ENST00000476988 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
ITGB5-206ENST00000476988 CAMTA2O94983 1202 aa13.59□□□□□ -0.23
ITGB5-206ENST00000476988 PRELPP51888 382 aa13.59□□□□□ -0.23
ITGB5-206ENST00000476988 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
ITGB5-206ENST00000476988 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
ITGB5-206ENST00000476988 DDNO94850 711 aaPredicted RBP13.58□□□□□ -0.24
ITGB5-206ENST00000476988 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
ITGB5-206ENST00000476988 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
ITGB5-206ENST00000476988 NRXN2Q9P2S2 1712 aa13.57□□□□□ -0.24
ITGB5-206ENST00000476988 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
ITGB5-206ENST00000476988 EAPPQ56P03 285 aaPredicted RBP13.57□□□□□ -0.24
ITGB5-206ENST00000476988 CCDC24Q8N4L8 307 aa13.57□□□□□ -0.24
ITGB5-206ENST00000476988 HACL1Q9UJ83 578 aa13.57□□□□□ -0.24
ITGB5-206ENST00000476988 CEMIPQ8WUJ3 1361 aa13.57□□□□□ -0.24
ITGB5-206ENST00000476988 TMEM88BA6NKF7 163 aa13.56□□□□□ -0.24
ITGB5-206ENST00000476988 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
ITGB5-206ENST00000476988 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
ITGB5-206ENST00000476988 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
ITGB5-206ENST00000476988 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
ITGB5-206ENST00000476988 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
ITGB5-206ENST00000476988 SBF1O95248 1867 aa13.56□□□□□ -0.24
ITGB5-206ENST00000476988 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
ITGB5-206ENST00000476988 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
ITGB5-206ENST00000476988 EIF6P56537 245 aaKnown RBP13.55□□□□□ -0.24
ITGB5-206ENST00000476988 RPGRQ92834 1020 aaKnown RBP13.55□□□□□ -0.24
ITGB5-206ENST00000476988 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
ITGB5-206ENST00000476988 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
ITGB5-206ENST00000476988 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
ITGB5-206ENST00000476988 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
ITGB5-206ENST00000476988 POTECB2RU33 542 aa13.54□□□□□ -0.24
ITGB5-206ENST00000476988 MCM10Q7L590 875 aa13.54□□□□□ -0.24
ITGB5-206ENST00000476988 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
ITGB5-206ENST00000476988 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
ITGB5-206ENST00000476988 TAF1DQ9H5J8 278 aaPredicted RBP13.54□□□□□ -0.24
ITGB5-206ENST00000476988 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
ITGB5-206ENST00000476988 GPC2Q8N158 579 aa13.53□□□□□ -0.24
ITGB5-206ENST00000476988 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
ITGB5-206ENST00000476988 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.25
ITGB5-206ENST00000476988 EPHX2P34913 555 aa13.52□□□□□ -0.25
ITGB5-206ENST00000476988 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
ITGB5-206ENST00000476988 MAP2K1Q02750 393 aaPredicted RBP13.52□□□□□ -0.25
ITGB5-206ENST00000476988 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
ITGB5-206ENST00000476988 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
ITGB5-206ENST00000476988 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
ITGB5-206ENST00000476988 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
ITGB5-206ENST00000476988 KLRG2A4D1S0 409 aaPredicted RBP13.51□□□□□ -0.25
ITGB5-206ENST00000476988 KCNQ3O43525 872 aa13.51□□□□□ -0.25
ITGB5-206ENST00000476988 DEFB115Q30KQ5 88 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms