RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
MACF1-216ENST00000476350 HSP90AB4PQ58FF6 505 aa10.12□□□□□ -0.79
MACF1-216ENST00000476350 SYNE3Q6ZMZ3 975 aa10.12□□□□□ -0.79
MACF1-216ENST00000476350 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
MACF1-216ENST00000476350 TSPYL4Q9UJ04 414 aa10.12□□□□□ -0.79
MACF1-216ENST00000476350 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
MACF1-216ENST00000476350 INTS4Q96HW7 963 aaKnown RBP10.11□□□□□ -0.79
MACF1-216ENST00000476350 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
MACF1-216ENST00000476350 ANAPC15P60006 121 aa10.11□□□□□ -0.79
MACF1-216ENST00000476350 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
MACF1-216ENST00000476350 CCDC43Q96MW1 224 aaKnown RBP10.11□□□□□ -0.79
MACF1-216ENST00000476350 WDR33Q9C0J8 1336 aaKnown RBP10.11□□□□□ -0.79
MACF1-216ENST00000476350 SSH2Q76I76 1423 aa10.11□□□□□ -0.79
MACF1-216ENST00000476350 CRB1P82279 1406 aa10.11□□□□□ -0.79
MACF1-216ENST00000476350 CHMLP26374 656 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 G2E3Q7L622 706 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 ZNF622Q969S3 477 aaKnown RBP eCLIP10.1□□□□□ -0.793e-7■■□□□ 12.7
MACF1-216ENST00000476350 PEAK1Q9H792 1746 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 RIMS1Q86UR5 1692 aaKnown RBP10.1□□□□□ -0.79
MACF1-216ENST00000476350 A2ML1A8K2U0 1454 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 TUBGCP6Q96RT7 1819 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 CUL4AQ13619 759 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 LETM1O95202 739 aaPredicted RBP10.1□□□□□ -0.79
MACF1-216ENST00000476350 AKAP17AQ02040 695 aaKnown RBP10.1□□□□□ -0.79
MACF1-216ENST00000476350 MPHOSPH8Q99549 860 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 UVSSAQ2YD98 709 aa10.1□□□□□ -0.79
MACF1-216ENST00000476350 CCDC183Q5T5S1 534 aa10.09□□□□□ -0.79
MACF1-216ENST00000476350 IGHMBP2P38935 993 aaKnown RBP10.09□□□□□ -0.79
MACF1-216ENST00000476350 PDE6BP35913 854 aa10.09□□□□□ -0.79
MACF1-216ENST00000476350 KIF3AQ9Y496 699 aa10.09□□□□□ -0.79
MACF1-216ENST00000476350 RGPD1P0DJD0 1748 aa10.09□□□□□ -0.79
MACF1-216ENST00000476350 RPAP1Q9BWH6 1393 aaPredicted RBP10.09□□□□□ -0.79
MACF1-216ENST00000476350 NRXN3Q9Y4C0 1643 aa10.09□□□□□ -0.79
MACF1-216ENST00000476350 MAP4K4O95819 1239 aaPredicted RBP10.09□□□□□ -0.79
MACF1-216ENST00000476350 RBM6P78332 1123 aaKnown RBP10.09□□□□□ -0.79
MACF1-216ENST00000476350 FAM208AQ9UK61 1670 aaKnown RBP10.09□□□□□ -0.79
MACF1-216ENST00000476350 ZNF830Q96NB3 372 aaPredicted RBP10.09□□□□□ -0.79
MACF1-216ENST00000476350 SRCIN1Q9C0H9 1055 aa10.09□□□□□ -0.79
MACF1-216ENST00000476350 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 TBC1D2BQ9UPU7 963 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 CNPY2Q9Y2B0 182 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 XRN1Q8IZH2 1706 aaKnown RBP10.08□□□□□ -0.8
MACF1-216ENST00000476350 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
MACF1-216ENST00000476350 G3BP1Q13283 466 aaKnown RBP eCLIP10.08□□□□□ -0.82e-6■■■□□ 15.7
MACF1-216ENST00000476350 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
MACF1-216ENST00000476350 MPNDQ8N594 471 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 FAM184AQ8NB25 1140 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 RTCBQ9Y3I0 505 aaKnown RBP10.08□□□□□ -0.8
MACF1-216ENST00000476350 ADCY5O95622 1261 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 SPATA31D1Q6ZQQ2 1576 aa10.08□□□□□ -0.8
MACF1-216ENST00000476350 METP08581 1390 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 USP25Q9UHP3 1055 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 GNAI3P08754 354 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 ATP8B2P98198 1209 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 NECTIN2Q92692 538 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 MPHOSPH6Q99547 160 aaKnown RBP10.07□□□□□ -0.8
MACF1-216ENST00000476350 UPF3BQ9BZI7 483 aaKnown RBP10.07□□□□□ -0.8
MACF1-216ENST00000476350 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 IKQ13123 557 aaPredicted RBP10.07□□□□□ -0.8
MACF1-216ENST00000476350 FKBP5Q13451 457 aaPredicted RBP10.07□□□□□ -0.8
MACF1-216ENST00000476350 BICDL1Q6ZP65 573 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
MACF1-216ENST00000476350 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 IFNL2Q8IZJ0 200 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 MYRIPQ8NFW9 859 aa10.07□□□□□ -0.8
MACF1-216ENST00000476350 PNMA6EA0A0J9YXQ4 647 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 HOOK2Q96ED9 719 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 AOX1Q06278 1338 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 TTC21BQ7Z4L5 1316 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 TTC21AQ8NDW8 1320 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 EIF6P56537 245 aaKnown RBP10.06□□□□□ -0.8
MACF1-216ENST00000476350 GRM1Q13255 1194 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 MTHFSDQ2M296 383 aaKnown RBP10.06□□□□□ -0.8
MACF1-216ENST00000476350 CCDC30Q5VVM6 783 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 LRRFIP2Q9Y608 721 aaKnown RBP10.06□□□□□ -0.8
MACF1-216ENST00000476350 PLCB2Q00722 1185 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 SMAP1Q8IYB5 467 aaPredicted RBP10.06□□□□□ -0.8
MACF1-216ENST00000476350 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
MACF1-216ENST00000476350 NOLC1Q14978 699 aaKnown RBP eCLIP10.06□□□□□ -0.8
MACF1-216ENST00000476350 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 PIBF1Q8WXW3 757 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 NALCNQ8IZF0 1738 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 TOPAZ1Q8N9V7 1692 aa10.06□□□□□ -0.8
MACF1-216ENST00000476350 MPRIPQ6WCQ1 1025 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 PRIMPOLQ96LW4 560 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 PPP1R42Q7Z4L9 355 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 CNNM1Q9NRU3 951 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.05□□□□□ -0.8
MACF1-216ENST00000476350 HSPA4P34932 840 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 FLIIQ13045 1269 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 EYA3Q99504 573 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 PRDM10Q9NQV6 1147 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms