RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
SATB1-213ENST00000476178 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
SATB1-213ENST00000476178 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
SATB1-213ENST00000476178 MASTLQ96GX5 879 aa11.13□□□□□ -0.63
SATB1-213ENST00000476178 NIP7Q9Y221 180 aaKnown RBP eCLIP11.13□□□□□ -0.63
SATB1-213ENST00000476178 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
SATB1-213ENST00000476178 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
SATB1-213ENST00000476178 NBPF26B4DH59 902 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 NFKBIEO00221 500 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 SRGNP10124 158 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 PRELPP51888 382 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 NBPF10Q6P3W6 841 aaKnown RBP11.12□□□□□ -0.63
SATB1-213ENST00000476178 NBPF15Q8N660 670 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 SMC1BQ8NDV3 1235 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
SATB1-213ENST00000476178 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
SATB1-213ENST00000476178 PRPF40BQ6NWY9 871 aaKnown RBP11.11□□□□□ -0.63
SATB1-213ENST00000476178 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
SATB1-213ENST00000476178 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
SATB1-213ENST00000476178 RRP7AQ9Y3A4 280 aaKnown RBP11.11□□□□□ -0.63
SATB1-213ENST00000476178 NPR1P16066 1061 aa11.1□□□□□ -0.63
SATB1-213ENST00000476178 HTRA3P83110 453 aa11.1□□□□□ -0.63
SATB1-213ENST00000476178 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
SATB1-213ENST00000476178 SBF1O95248 1867 aa11.1□□□□□ -0.63
SATB1-213ENST00000476178 MYL6BP14649 208 aa11.09□□□□□ -0.63
SATB1-213ENST00000476178 RIPK4P57078 832 aa11.09□□□□□ -0.63
SATB1-213ENST00000476178 EIF4A1P60842 406 aaKnown RBP11.09□□□□□ -0.63
SATB1-213ENST00000476178 HLFQ16534 295 aa11.09□□□□□ -0.63
SATB1-213ENST00000476178 KIF6Q6ZMV9 814 aa11.09□□□□□ -0.63
SATB1-213ENST00000476178 DNAJC5GQ8N7S2 189 aa11.09□□□□□ -0.63
SATB1-213ENST00000476178 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
SATB1-213ENST00000476178 SCN7AQ01118 1682 aa11.08□□□□□ -0.64
SATB1-213ENST00000476178 RGL2O15211 777 aa11.08□□□□□ -0.64
SATB1-213ENST00000476178 TMPOP42166 694 aaKnown RBP11.08□□□□□ -0.64
SATB1-213ENST00000476178 CCDC93Q567U6 631 aa11.08□□□□□ -0.64
SATB1-213ENST00000476178 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
SATB1-213ENST00000476178 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 ALDH1B1P30837 517 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 NYXQ9GZU5 481 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 TSPYL4Q9UJ04 414 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 ADAMTS8Q9UP79 889 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 DLEC1Q9Y238 1755 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 LTBP3Q9NS15 1303 aa11.07□□□□□ -0.64
SATB1-213ENST00000476178 ANKRD31Q8N7Z5 1873 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 KDM3BQ7LBC6 1761 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 DDNO94850 711 aaPredicted RBP11.06□□□□□ -0.64
SATB1-213ENST00000476178 EIF2S2P20042 333 aaKnown RBP11.06□□□□□ -0.64
SATB1-213ENST00000476178 GPTP24298 496 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
SATB1-213ENST00000476178 TTLL7Q6ZT98 887 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 CCDC146Q8IYE0 955 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 KLRG1Q96E93 195 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 MAP3K15Q6ZN16 1313 aa11.06□□□□□ -0.64
SATB1-213ENST00000476178 TNRC6CQ9HCJ0 1690 aaKnown RBP11.05□□□□□ -0.64
SATB1-213ENST00000476178 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
SATB1-213ENST00000476178 POTECB2RU33 542 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 OLFM4Q6UX06 510 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 RPGRQ92834 1020 aaKnown RBP11.05□□□□□ -0.64
SATB1-213ENST00000476178 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 ZNF277Q9NRM2 450 aaPredicted RBP11.05□□□□□ -0.64
SATB1-213ENST00000476178 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
SATB1-213ENST00000476178 FKBP4Q02790 459 aaKnown RBP eCLIP11.04□□□□□ -0.64
SATB1-213ENST00000476178 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
SATB1-213ENST00000476178 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 CEP350Q5VT06 3117 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 IQCA1LA6NCM1 817 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 SUSD4Q5VX71 490 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 SYNE4Q8N205 404 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
SATB1-213ENST00000476178 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
SATB1-213ENST00000476178 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
SATB1-213ENST00000476178 LAS1LQ9Y4W2 734 aaKnown RBP11.03□□□□□ -0.64
SATB1-213ENST00000476178 COL11A2P13942 1736 aaPredicted RBP11.03□□□□□ -0.64
SATB1-213ENST00000476178 CHL1O00533 1208 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 TCERG1O14776 1098 aaKnown RBP11.02□□□□□ -0.65
SATB1-213ENST00000476178 AIMP1Q12904 312 aaKnown RBP11.02□□□□□ -0.65
SATB1-213ENST00000476178 PDIA6Q15084 440 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
SATB1-213ENST00000476178 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 ERBB4Q15303 1308 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 FER1L6Q2WGJ9 1857 aa11.02□□□□□ -0.65
SATB1-213ENST00000476178 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 ANXA1P04083 346 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms