RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 RPAP2Q8IXW5 612 aaPredicted RBP22.63■■□□□ 1.21
LAMP3-204ENST00000476015 MEIS3Q99687 375 aa22.63■■□□□ 1.21
LAMP3-204ENST00000476015 ATP10DQ9P241 1426 aa22.63■■□□□ 1.21
LAMP3-204ENST00000476015 GNAI2P04899 355 aa22.62■■□□□ 1.21
LAMP3-204ENST00000476015 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
LAMP3-204ENST00000476015 IL6STP40189 918 aaPredicted RBP22.6■■□□□ 1.21
LAMP3-204ENST00000476015 UBTFL1P0CB47 393 aaPredicted RBP22.59■■□□□ 1.21
LAMP3-204ENST00000476015 KIF6Q6ZMV9 814 aa22.59■■□□□ 1.21
LAMP3-204ENST00000476015 TTLL7Q6ZT98 887 aa22.59■■□□□ 1.21
LAMP3-204ENST00000476015 PTF1AQ7RTS3 328 aa22.59■■□□□ 1.21
LAMP3-204ENST00000476015 C1orf115Q9H7X2 142 aa22.59■■□□□ 1.21
LAMP3-204ENST00000476015 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
LAMP3-204ENST00000476015 C9orf78Q9NZ63 289 aaPredicted RBP22.59■■□□□ 1.21
LAMP3-204ENST00000476015 ITPK1Q13572 414 aa22.58■■□□□ 1.21
LAMP3-204ENST00000476015 MYD88Q99836 296 aa22.58■■□□□ 1.21
LAMP3-204ENST00000476015 YY1P25490 414 aa22.57■■□□□ 1.2
LAMP3-204ENST00000476015 INTS5Q6P9B9 1019 aaKnown RBP22.57■■□□□ 1.2
LAMP3-204ENST00000476015 ANKRD44Q8N8A2 993 aa22.57■■□□□ 1.2
LAMP3-204ENST00000476015 IBTKQ9P2D0 1353 aaPredicted RBP22.57■■□□□ 1.2
LAMP3-204ENST00000476015 HMGB2P26583 209 aaKnown RBP22.56■■□□□ 1.2
LAMP3-204ENST00000476015 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
LAMP3-204ENST00000476015 EZH2Q15910 746 aaKnown RBP22.56■■□□□ 1.2
LAMP3-204ENST00000476015 ARXQ96QS3 562 aa22.56■■□□□ 1.2
LAMP3-204ENST00000476015 ZBTB1Q9Y2K1 713 aa22.56■■□□□ 1.2
LAMP3-204ENST00000476015 ZNF330Q9Y3S2 320 aaPredicted RBP22.56■■□□□ 1.2
LAMP3-204ENST00000476015 NHSQ6T4R5 1651 aa22.55■■□□□ 1.2
LAMP3-204ENST00000476015 NEURL1BA8MQ27 555 aa22.55■■□□□ 1.2
LAMP3-204ENST00000476015 HMMRO75330 724 aa22.55■■□□□ 1.2
LAMP3-204ENST00000476015 CWF19L2Q2TBE0 894 aaKnown RBP22.55■■□□□ 1.2
LAMP3-204ENST00000476015 RC3H1Q5TC82 1133 aaKnown RBP22.55■■□□□ 1.2
LAMP3-204ENST00000476015 IGKV5-2P06315 115 aa22.54■■□□□ 1.2
LAMP3-204ENST00000476015 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
LAMP3-204ENST00000476015 ATP8B2P98198 1209 aa22.54■■□□□ 1.2
LAMP3-204ENST00000476015 CEP85Q6P2H3 762 aa22.54■■□□□ 1.2
LAMP3-204ENST00000476015 GCC1Q96CN9 775 aa22.54■■□□□ 1.2
LAMP3-204ENST00000476015 ERVV-1B6SEH8 477 aa22.53■■□□□ 1.2
LAMP3-204ENST00000476015 GCKRQ14397 625 aa22.53■■□□□ 1.2
LAMP3-204ENST00000476015 SIRT2Q8IXJ6 389 aa22.53■■□□□ 1.2
LAMP3-204ENST00000476015 ZBTB3Q9H5J0 574 aa22.53■■□□□ 1.2
LAMP3-204ENST00000476015 CCNL1Q9UK58 526 aaPredicted RBP22.53■■□□□ 1.2
LAMP3-204ENST00000476015 UTYO14607 1347 aa22.53■■□□□ 1.2
LAMP3-204ENST00000476015 MAP3K15Q6ZN16 1313 aa22.53■■□□□ 1.2
LAMP3-204ENST00000476015 ZNF831Q5JPB2 1677 aa22.52■■□□□ 1.2
LAMP3-204ENST00000476015 GRM8O00222 908 aa22.52■■□□□ 1.2
LAMP3-204ENST00000476015 TRIM37O94972 964 aa22.52■■□□□ 1.2
LAMP3-204ENST00000476015 NBPF7P0C2Y1 421 aaPredicted RBP22.52■■□□□ 1.2
LAMP3-204ENST00000476015 TCIRG1Q13488 830 aa22.52■■□□□ 1.2
LAMP3-204ENST00000476015 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
LAMP3-204ENST00000476015 CAMKK2Q96RR4 588 aa22.52■■□□□ 1.2
LAMP3-204ENST00000476015 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
LAMP3-204ENST00000476015 TJP1Q07157 1748 aa22.51■■□□□ 1.19
LAMP3-204ENST00000476015 A0A087WZG4 1122 aa22.51■■□□□ 1.19
LAMP3-204ENST00000476015 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
LAMP3-204ENST00000476015 CCDC191Q8NCU4 936 aa22.51■■□□□ 1.19
LAMP3-204ENST00000476015 SBF2Q86WG5 1849 aa22.51■■□□□ 1.19
LAMP3-204ENST00000476015 N4BP2Q86UW6 1770 aaPredicted RBP22.5■■□□□ 1.19
LAMP3-204ENST00000476015 BTAF1O14981 1849 aa22.5■■□□□ 1.19
LAMP3-204ENST00000476015 TRIM28Q13263 835 aaKnown RBP22.5■■□□□ 1.19
LAMP3-204ENST00000476015 GIGYF2Q6Y7W6 1299 aaKnown RBP22.5■■□□□ 1.19
LAMP3-204ENST00000476015 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
LAMP3-204ENST00000476015 LINC00116Q8NCU8 138 aa22.5■■□□□ 1.19
LAMP3-204ENST00000476015 TNS1Q9HBL0 1735 aaKnown RBP22.5■■□□□ 1.19
LAMP3-204ENST00000476015 CNTNAP4Q9C0A0 1308 aa22.5■■□□□ 1.19
LAMP3-204ENST00000476015 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
LAMP3-204ENST00000476015 DCTPP1Q9H773 170 aa22.49■■□□□ 1.19
LAMP3-204ENST00000476015 CWC25Q9NXE8 425 aaPredicted RBP22.49■■□□□ 1.19
LAMP3-204ENST00000476015 CICQ96RK0 1608 aaPredicted RBP22.49■■□□□ 1.19
LAMP3-204ENST00000476015 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
LAMP3-204ENST00000476015 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
LAMP3-204ENST00000476015 SLC27A3Q5K4L6 730 aa22.47■■□□□ 1.19
LAMP3-204ENST00000476015 PDZRN3Q9UPQ7 1066 aa22.47■■□□□ 1.19
LAMP3-204ENST00000476015 H7C1W4 665 aa22.46■■□□□ 1.19
LAMP3-204ENST00000476015 RPS6KA4O75676 772 aa22.46■■□□□ 1.19
LAMP3-204ENST00000476015 KCNQ4P56696 695 aa22.46■■□□□ 1.19
LAMP3-204ENST00000476015 PLSCR1O15162 318 aa22.44■■□□□ 1.18
LAMP3-204ENST00000476015 NUCB1Q02818 461 aa22.44■■□□□ 1.18
LAMP3-204ENST00000476015 HLFQ16534 295 aa22.44■■□□□ 1.18
LAMP3-204ENST00000476015 SSH3Q8TE77 659 aa22.44■■□□□ 1.18
LAMP3-204ENST00000476015 ZBTB47Q9UFB7 747 aaPredicted RBP22.44■■□□□ 1.18
LAMP3-204ENST00000476015 ARFGEF2Q9Y6D5 1785 aa22.43■■□□□ 1.18
LAMP3-204ENST00000476015 PPP1R42Q7Z4L9 355 aa22.43■■□□□ 1.18
LAMP3-204ENST00000476015 RGL2O15211 777 aa22.42■■□□□ 1.18
LAMP3-204ENST00000476015 APBA3O96018 575 aa22.42■■□□□ 1.18
LAMP3-204ENST00000476015 MTX1Q13505 466 aa22.42■■□□□ 1.18
LAMP3-204ENST00000476015 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
LAMP3-204ENST00000476015 SUCLG2Q96I99 432 aa22.42■■□□□ 1.18
LAMP3-204ENST00000476015 RTCBQ9Y3I0 505 aaKnown RBP22.42■■□□□ 1.18
LAMP3-204ENST00000476015 PNMA6EA0A0J9YXQ4 647 aa22.41■■□□□ 1.18
LAMP3-204ENST00000476015 POLA2Q14181 598 aa22.41■■□□□ 1.18
LAMP3-204ENST00000476015 CLEC4GQ6UXB4 293 aa22.41■■□□□ 1.18
LAMP3-204ENST00000476015 UBE3BQ7Z3V4 1068 aa22.41■■□□□ 1.18
LAMP3-204ENST00000476015 ZNF652Q9Y2D9 606 aa22.41■■□□□ 1.18
LAMP3-204ENST00000476015 RREB1Q92766 1687 aa22.41■■□□□ 1.18
LAMP3-204ENST00000476015 LY75O60449 1722 aa22.4■■□□□ 1.18
LAMP3-204ENST00000476015 COL15A1P39059 1388 aa22.4■■□□□ 1.18
LAMP3-204ENST00000476015 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
LAMP3-204ENST00000476015 CAMTA2O94983 1202 aa22.4■■□□□ 1.18
LAMP3-204ENST00000476015 CASP7P55210 303 aa22.4■■□□□ 1.18
LAMP3-204ENST00000476015 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
LAMP3-204ENST00000476015 ZNF34Q8IZ26 560 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms