RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-209ENST00000474647 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
CCDC78-209ENST00000474647 CAMTA2O94983 1202 aa18.76■□□□□ 0.59
CCDC78-209ENST00000474647 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
CCDC78-209ENST00000474647 TAOK3Q9H2K8 898 aa18.76■□□□□ 0.59
CCDC78-209ENST00000474647 KDM3BQ7LBC6 1761 aa18.76■□□□□ 0.59
CCDC78-209ENST00000474647 CAPN15O75808 1086 aa18.75■□□□□ 0.59
CCDC78-209ENST00000474647 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
CCDC78-209ENST00000474647 RSPH6AQ9H0K4 717 aa18.75■□□□□ 0.59
CCDC78-209ENST00000474647 POTECB2RU33 542 aa18.74■□□□□ 0.59
CCDC78-209ENST00000474647 PRPF40BQ6NWY9 871 aaKnown RBP18.74■□□□□ 0.59
CCDC78-209ENST00000474647 CNKSR1Q969H4 720 aa18.74■□□□□ 0.59
CCDC78-209ENST00000474647 PRAMEF22A3QJZ6 481 aa18.73■□□□□ 0.59
CCDC78-209ENST00000474647 STYK1Q6J9G0 422 aa18.73■□□□□ 0.59
CCDC78-209ENST00000474647 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
CCDC78-209ENST00000474647 SRGNP10124 158 aa18.72■□□□□ 0.59
CCDC78-209ENST00000474647 NBPF5PQ86XG9 351 aaPredicted RBP18.72■□□□□ 0.59
CCDC78-209ENST00000474647 TNS4Q8IZW8 715 aa18.72■□□□□ 0.59
CCDC78-209ENST00000474647 MASTLQ96GX5 879 aa18.72■□□□□ 0.59
CCDC78-209ENST00000474647 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
CCDC78-209ENST00000474647 DDNO94850 711 aaPredicted RBP18.71■□□□□ 0.59
CCDC78-209ENST00000474647 HSPA1AP0DMV8 641 aaKnown RBP18.71■□□□□ 0.59
CCDC78-209ENST00000474647 HSPA1BP0DMV9 641 aaKnown RBP18.71■□□□□ 0.59
CCDC78-209ENST00000474647 SOGA3Q5TF21 947 aa18.71■□□□□ 0.59
CCDC78-209ENST00000474647 MCM10Q7L590 875 aa18.71■□□□□ 0.59
CCDC78-209ENST00000474647 RTF1Q92541 710 aaKnown RBP18.71■□□□□ 0.59
CCDC78-209ENST00000474647 NUDCQ9Y266 331 aa18.71■□□□□ 0.59
CCDC78-209ENST00000474647 ZNF652Q9Y2D9 606 aa18.71■□□□□ 0.59
CCDC78-209ENST00000474647 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
CCDC78-209ENST00000474647 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC78-209ENST00000474647 FAM177BA6PVY3 158 aa18.68■□□□□ 0.58
CCDC78-209ENST00000474647 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
CCDC78-209ENST00000474647 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
CCDC78-209ENST00000474647 POTEJP0CG39 1038 aa18.68■□□□□ 0.58
CCDC78-209ENST00000474647 CHADLQ6NUI6 762 aa18.68■□□□□ 0.58
CCDC78-209ENST00000474647 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
CCDC78-209ENST00000474647 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
CCDC78-209ENST00000474647 MKRN1Q9UHC7 482 aaKnown RBP18.67■□□□□ 0.58
CCDC78-209ENST00000474647 NIP7Q9Y221 180 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC78-209ENST00000474647 ADAMTSL1Q8N6G6 1762 aa18.66■□□□□ 0.58
CCDC78-209ENST00000474647 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
CCDC78-209ENST00000474647 IQCA1LA6NCM1 817 aa18.65■□□□□ 0.58
CCDC78-209ENST00000474647 NPR1P16066 1061 aa18.65■□□□□ 0.58
CCDC78-209ENST00000474647 CREBZFQ9NS37 354 aa18.65■□□□□ 0.58
CCDC78-209ENST00000474647 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
CCDC78-209ENST00000474647 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
CCDC78-209ENST00000474647 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
CCDC78-209ENST00000474647 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
CCDC78-209ENST00000474647 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
CCDC78-209ENST00000474647 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
CCDC78-209ENST00000474647 ANKRD36CQ5JPF3 1778 aa18.63■□□□□ 0.57
CCDC78-209ENST00000474647 TRPM7Q96QT4 1865 aa18.63■□□□□ 0.57
CCDC78-209ENST00000474647 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC78-209ENST00000474647 ZNF277Q9NRM2 450 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-209ENST00000474647 ZNF541Q9H0D2 1346 aa18.63■□□□□ 0.57
CCDC78-209ENST00000474647 LAMB2P55268 1798 aa18.63■□□□□ 0.57
CCDC78-209ENST00000474647 GTF2E1P29083 439 aaPredicted RBP18.62■□□□□ 0.57
CCDC78-209ENST00000474647 EAPPQ56P03 285 aaPredicted RBP18.62■□□□□ 0.57
CCDC78-209ENST00000474647 LDHDQ86WU2 507 aa18.62■□□□□ 0.57
CCDC78-209ENST00000474647 C7orf43Q8WVR3 580 aa18.62■□□□□ 0.57
CCDC78-209ENST00000474647 HLFQ16534 295 aa18.61■□□□□ 0.57
CCDC78-209ENST00000474647 NGEFQ8N5V2 710 aa18.61■□□□□ 0.57
CCDC78-209ENST00000474647 TAF1DQ9H5J8 278 aaPredicted RBP18.61■□□□□ 0.57
CCDC78-209ENST00000474647 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
CCDC78-209ENST00000474647 L3MBTL3Q96JM7 780 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-209ENST00000474647 CNTNAP1P78357 1384 aa18.59■□□□□ 0.57
CCDC78-209ENST00000474647 ABCC12Q96J65 1359 aa18.59■□□□□ 0.57
CCDC78-209ENST00000474647 KLRG2A4D1S0 409 aaPredicted RBP18.59■□□□□ 0.57
CCDC78-209ENST00000474647 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
CCDC78-209ENST00000474647 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
CCDC78-209ENST00000474647 RTKN2Q8IZC4 609 aa18.59■□□□□ 0.57
CCDC78-209ENST00000474647 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
CCDC78-209ENST00000474647 LTBP1Q14766 1721 aa18.59■□□□□ 0.57
CCDC78-209ENST00000474647 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
CCDC78-209ENST00000474647 PASKQ96RG2 1323 aa18.58■□□□□ 0.57
CCDC78-209ENST00000474647 NEFMP07197 916 aa18.58■□□□□ 0.56
CCDC78-209ENST00000474647 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
CCDC78-209ENST00000474647 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.56
CCDC78-209ENST00000474647 HACL1Q9UJ83 578 aa18.58■□□□□ 0.56
CCDC78-209ENST00000474647 RGL2O15211 777 aa18.57■□□□□ 0.56
CCDC78-209ENST00000474647 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
CCDC78-209ENST00000474647 EPHX2P34913 555 aa18.56■□□□□ 0.56
CCDC78-209ENST00000474647 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
CCDC78-209ENST00000474647 SYNE4Q8N205 404 aa18.56■□□□□ 0.56
CCDC78-209ENST00000474647 NYXQ9GZU5 481 aa18.56■□□□□ 0.56
CCDC78-209ENST00000474647 COL4A5P29400 1685 aa18.56■□□□□ 0.56
CCDC78-209ENST00000474647 TAF1P21675 1872 aa18.56■□□□□ 0.56
CCDC78-209ENST00000474647 TMEM88BA6NKF7 163 aa18.55■□□□□ 0.56
CCDC78-209ENST00000474647 MYL6BP14649 208 aa18.55■□□□□ 0.56
CCDC78-209ENST00000474647 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
CCDC78-209ENST00000474647 RRP7AQ9Y3A4 280 aaKnown RBP18.55■□□□□ 0.56
CCDC78-209ENST00000474647 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
CCDC78-209ENST00000474647 GPTP24298 496 aa18.54■□□□□ 0.56
CCDC78-209ENST00000474647 JDP2Q8WYK2 163 aa18.54■□□□□ 0.56
CCDC78-209ENST00000474647 SNED1Q8TER0 1413 aa18.54■□□□□ 0.56
CCDC78-209ENST00000474647 FOXN1O15353 648 aa18.53■□□□□ 0.56
CCDC78-209ENST00000474647 TTLL7Q6ZT98 887 aa18.53■□□□□ 0.56
CCDC78-209ENST00000474647 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
CCDC78-209ENST00000474647 AIDAQ96BJ3 306 aa18.53■□□□□ 0.56
CCDC78-209ENST00000474647 ZBTB3Q9H5J0 574 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms