RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 AFF2P51816 1311 aa24.61■■□□□ 1.53
SSR1-204ENST00000474597 IBTKQ9P2D0 1353 aaPredicted RBP24.6■■□□□ 1.53
SSR1-204ENST00000474597 PPP1R42Q7Z4L9 355 aa24.59■■□□□ 1.53
SSR1-204ENST00000474597 ZNF330Q9Y3S2 320 aaPredicted RBP24.59■■□□□ 1.53
SSR1-204ENST00000474597 UTYO14607 1347 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 SRGAP3O43295 1099 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 GCKRQ14397 625 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 TTLL7Q6ZT98 887 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 SSH3Q8TE77 659 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 BCL11AQ9H165 835 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 EXOC6BQ9Y2D4 811 aa24.58■■□□□ 1.53
SSR1-204ENST00000474597 NUP188Q5SRE5 1749 aa24.57■■□□□ 1.52
SSR1-204ENST00000474597 GJD4Q96KN9 370 aaPredicted RBP24.57■■□□□ 1.52
SSR1-204ENST00000474597 THSD7AQ9UPZ6 1657 aa24.56■■□□□ 1.52
SSR1-204ENST00000474597 SLC4A9Q96Q91 983 aa24.56■■□□□ 1.52
SSR1-204ENST00000474597 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
SSR1-204ENST00000474597 TJP1Q07157 1748 aa24.55■■□□□ 1.52
SSR1-204ENST00000474597 CYP19A1P11511 503 aaPredicted RBP24.55■■□□□ 1.52
SSR1-204ENST00000474597 POLA2Q14181 598 aa24.55■■□□□ 1.52
SSR1-204ENST00000474597 KIF6Q6ZMV9 814 aa24.55■■□□□ 1.52
SSR1-204ENST00000474597 SMARCC1Q92922 1105 aaPredicted RBP24.55■■□□□ 1.52
SSR1-204ENST00000474597 ZBTB3Q9H5J0 574 aa24.54■■□□□ 1.52
SSR1-204ENST00000474597 ATP5J2-PTCD1G3V325 749 aa24.54■■□□□ 1.52
SSR1-204ENST00000474597 SMARCA5O60264 1052 aaPredicted RBP24.54■■□□□ 1.52
SSR1-204ENST00000474597 SUCLG2Q96I99 432 aa24.54■■□□□ 1.52
SSR1-204ENST00000474597 LRRCC1Q9C099 1032 aa24.54■■□□□ 1.52
SSR1-204ENST00000474597 ANP32AP39687 249 aaKnown RBP24.53■■□□□ 1.52
SSR1-204ENST00000474597 NPM2Q86SE8 214 aaKnown RBP24.53■■□□□ 1.52
SSR1-204ENST00000474597 MTX1Q13505 466 aa24.52■■□□□ 1.52
SSR1-204ENST00000474597 ARXQ96QS3 562 aa24.52■■□□□ 1.52
SSR1-204ENST00000474597 ATRNO75882 1429 aa24.52■■□□□ 1.52
SSR1-204ENST00000474597 SURF6O75683 361 aaKnown RBP24.51■■□□□ 1.51
SSR1-204ENST00000474597 ATP6V1AP38606 617 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 PALLDQ8WX93 1383 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 A0A087WZG4 1122 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 LOC102724428A0A0B4J2F2 783 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 KCNQ2O43526 872 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 RAB11FIP3O75154 756 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 SIK1P57059 783 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 HSP90AB4PQ58FF6 505 aa24.51■■□□□ 1.51
SSR1-204ENST00000474597 BMP2KLQ5H9B9 411 aa24.5■■□□□ 1.51
SSR1-204ENST00000474597 PLEKHM2Q8IWE5 1019 aa24.5■■□□□ 1.51
SSR1-204ENST00000474597 C16orf71Q8IYS4 520 aaPredicted RBP24.5■■□□□ 1.51
SSR1-204ENST00000474597 BICC1Q9H694 974 aaKnown RBP24.5■■□□□ 1.51
SSR1-204ENST00000474597 CWC25Q9NXE8 425 aaPredicted RBP24.49■■□□□ 1.51
SSR1-204ENST00000474597 UBE3BQ7Z3V4 1068 aa24.49■■□□□ 1.51
SSR1-204ENST00000474597 ZBTB1Q9Y2K1 713 aa24.49■■□□□ 1.51
SSR1-204ENST00000474597 CCDC191Q8NCU4 936 aa24.47■■□□□ 1.51
SSR1-204ENST00000474597 IL6STP40189 918 aaPredicted RBP24.47■■□□□ 1.51
SSR1-204ENST00000474597 OS9Q13438 667 aaPredicted RBP24.47■■□□□ 1.51
SSR1-204ENST00000474597 KAZALD1Q96I82 304 aa24.47■■□□□ 1.51
SSR1-204ENST00000474597 MAP3K15Q6ZN16 1313 aa24.46■■□□□ 1.51
SSR1-204ENST00000474597 QTRT2Q9H974 415 aaKnown RBP24.46■■□□□ 1.51
SSR1-204ENST00000474597 CICQ96RK0 1608 aaPredicted RBP24.46■■□□□ 1.51
SSR1-204ENST00000474597 TCIRG1Q13488 830 aa24.45■■□□□ 1.5
SSR1-204ENST00000474597 KIF1BPQ96EK5 621 aa24.45■■□□□ 1.5
SSR1-204ENST00000474597 CCDC87Q9NVE4 849 aa24.45■■□□□ 1.5
SSR1-204ENST00000474597 JARID2Q92833 1246 aaPredicted RBP24.45■■□□□ 1.5
SSR1-204ENST00000474597 UPF2Q9HAU5 1272 aaKnown RBP24.45■■□□□ 1.5
SSR1-204ENST00000474597 COL15A1P39059 1388 aa24.44■■□□□ 1.5
SSR1-204ENST00000474597 ONECUT3O60422 494 aaPredicted RBP24.44■■□□□ 1.5
SSR1-204ENST00000474597 OTUD7AQ8TE49 926 aaPredicted RBP24.44■■□□□ 1.5
SSR1-204ENST00000474597 NOP58Q9Y2X3 529 aaKnown RBP24.44■■□□□ 1.5
SSR1-204ENST00000474597 NHSQ6T4R5 1651 aa24.44■■□□□ 1.5
SSR1-204ENST00000474597 H7C1W4 665 aa24.43■■□□□ 1.5
SSR1-204ENST00000474597 CRKLP46109 303 aaKnown RBP24.43■■□□□ 1.5
SSR1-204ENST00000474597 HSP90AB3PQ58FF7 597 aa24.43■■□□□ 1.5
SSR1-204ENST00000474597 TTC22Q5TAA0 569 aa24.43■■□□□ 1.5
SSR1-204ENST00000474597 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
SSR1-204ENST00000474597 RHPN1Q8TCX5 695 aa24.43■■□□□ 1.5
SSR1-204ENST00000474597 GIGYF2Q6Y7W6 1299 aaKnown RBP24.42■■□□□ 1.5
SSR1-204ENST00000474597 ISCA1Q9BUE6 129 aa24.42■■□□□ 1.5
SSR1-204ENST00000474597 BTAF1O14981 1849 aa24.42■■□□□ 1.5
SSR1-204ENST00000474597 ITPK1Q13572 414 aa24.42■■□□□ 1.5
SSR1-204ENST00000474597 DZIP3Q86Y13 1208 aaKnown RBP24.42■■□□□ 1.5
SSR1-204ENST00000474597 ERC1Q8IUD2 1116 aa24.42■■□□□ 1.5
SSR1-204ENST00000474597 ZNF831Q5JPB2 1677 aa24.41■■□□□ 1.5
SSR1-204ENST00000474597 CASP7P55210 303 aa24.41■■□□□ 1.5
SSR1-204ENST00000474597 EPHA10Q5JZY3 1008 aa24.41■■□□□ 1.5
SSR1-204ENST00000474597 FAM182BQ5T319 152 aa24.41■■□□□ 1.5
SSR1-204ENST00000474597 IL1RAPL2Q9NP60 686 aa24.41■■□□□ 1.5
SSR1-204ENST00000474597 INTS5Q6P9B9 1019 aaKnown RBP24.4■■□□□ 1.5
SSR1-204ENST00000474597 PA2G4Q9UQ80 394 aaKnown RBP24.4■■□□□ 1.5
SSR1-204ENST00000474597 ANKRD36CQ5JPF3 1778 aa24.4■■□□□ 1.5
SSR1-204ENST00000474597 SEC24BO95487 1268 aa24.4■■□□□ 1.5
SSR1-204ENST00000474597 PDE1AP54750 535 aa24.4■■□□□ 1.5
SSR1-204ENST00000474597 TRIM28Q13263 835 aaKnown RBP24.4■■□□□ 1.5
SSR1-204ENST00000474597 G3BP1Q13283 466 aaKnown RBP eCLIP24.4■■□□□ 1.51e-9■□□□□ 8
SSR1-204ENST00000474597 RTL5Q5HYW3 569 aaPredicted RBP24.4■■□□□ 1.5
SSR1-204ENST00000474597 OSBPL3Q9H4L5 887 aa24.4■■□□□ 1.5
SSR1-204ENST00000474597 RREB1Q92766 1687 aa24.39■■□□□ 1.5
SSR1-204ENST00000474597 NUP98P52948 1817 aa24.39■■□□□ 1.49
SSR1-204ENST00000474597 ERVV-1B6SEH8 477 aa24.39■■□□□ 1.49
SSR1-204ENST00000474597 GSPT1P15170 499 aaKnown RBP24.39■■□□□ 1.49
SSR1-204ENST00000474597 MX1P20591 662 aa24.39■■□□□ 1.49
SSR1-204ENST00000474597 COL5A3P25940 1745 aaPredicted RBP24.39■■□□□ 1.49
SSR1-204ENST00000474597 EIF5P55010 431 aaKnown RBP24.38■■□□□ 1.49
SSR1-204ENST00000474597 RABL6Q3YEC7 729 aaPredicted RBP24.38■■□□□ 1.49
SSR1-204ENST00000474597 TBC1D2BQ9UPU7 963 aa24.38■■□□□ 1.49
SSR1-204ENST00000474597 HLFQ16534 295 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms