RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZBTB7AO95365 584 aa25.73■■□□□ 1.71
CDHR3-210ENST00000474330 PI4KAP2A4QPH2 592 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 NBPF26B4DH59 902 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 STARD3NLO95772 234 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 DDX58O95786 925 aaKnown RBP25.72■■□□□ 1.71
CDHR3-210ENST00000474330 NBPF10Q6P3W6 841 aaKnown RBP25.72■■□□□ 1.71
CDHR3-210ENST00000474330 KSR2Q6VAB6 950 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 NBPF15Q8N660 670 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 PI4KAP1Q8N8J0 262 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 ADCY9O60503 1353 aa25.72■■□□□ 1.71
CDHR3-210ENST00000474330 A1BGP04217 495 aa25.71■■□□□ 1.71
CDHR3-210ENST00000474330 DNAAF4Q8WXU2 420 aa25.71■■□□□ 1.71
CDHR3-210ENST00000474330 PNPLA7Q6ZV29 1317 aa25.71■■□□□ 1.71
CDHR3-210ENST00000474330 ATP6V1AP38606 617 aa25.7■■□□□ 1.71
CDHR3-210ENST00000474330 COPS6Q7L5N1 327 aa25.7■■□□□ 1.71
CDHR3-210ENST00000474330 PIP4K2AP48426 406 aaPredicted RBP25.7■■□□□ 1.7
CDHR3-210ENST00000474330 XAGE3Q8WTP9 111 aa25.7■■□□□ 1.7
CDHR3-210ENST00000474330 TFCP2L1Q9NZI6 479 aa25.7■■□□□ 1.7
CDHR3-210ENST00000474330 CYP19A1P11511 503 aaPredicted RBP25.69■■□□□ 1.7
CDHR3-210ENST00000474330 AIMP1Q12904 312 aaKnown RBP25.69■■□□□ 1.7
CDHR3-210ENST00000474330 ATF5Q9Y2D1 282 aaPredicted RBP25.69■■□□□ 1.7
CDHR3-210ENST00000474330 PCDHB15Q9Y5E8 787 aa25.69■■□□□ 1.7
CDHR3-210ENST00000474330 PTGER2P43116 358 aa25.68■■□□□ 1.7
CDHR3-210ENST00000474330 C4BP0C0L5 1744 aa25.68■■□□□ 1.7
CDHR3-210ENST00000474330 ATP10DQ9P241 1426 aa25.67■■□□□ 1.7
CDHR3-210ENST00000474330 MAP3K2Q9Y2U5 619 aa25.67■■□□□ 1.7
CDHR3-210ENST00000474330 ITPK1Q13572 414 aa25.66■■□□□ 1.7
CDHR3-210ENST00000474330 BEND3Q5T5X7 828 aa25.66■■□□□ 1.7
CDHR3-210ENST00000474330 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
CDHR3-210ENST00000474330 MTFR1LQ9H019 292 aa25.66■■□□□ 1.7
CDHR3-210ENST00000474330 MYH14Q7Z406 1995 aaKnown RBP25.65■■□□□ 1.7
CDHR3-210ENST00000474330 LINC00116Q8NCU8 138 aa25.65■■□□□ 1.7
CDHR3-210ENST00000474330 SGIP1Q9BQI5 828 aa25.65■■□□□ 1.7
CDHR3-210ENST00000474330 SRCIN1Q9C0H9 1055 aa25.65■■□□□ 1.7
CDHR3-210ENST00000474330 KDM2BQ8NHM5 1336 aa25.65■■□□□ 1.7
CDHR3-210ENST00000474330 RIC3Q7Z5B4 369 aa25.64■■□□□ 1.7
CDHR3-210ENST00000474330 AMIGO3Q86WK7 504 aa25.64■■□□□ 1.7
CDHR3-210ENST00000474330 COL24A1Q17RW2 1714 aa25.64■■□□□ 1.69
CDHR3-210ENST00000474330 UBR3Q6ZT12 1888 aa25.64■■□□□ 1.69
CDHR3-210ENST00000474330 COL23A1Q86Y22 540 aaPredicted RBP25.63■■□□□ 1.69
CDHR3-210ENST00000474330 CENPQQ7L2Z9 268 aaPredicted RBP25.63■■□□□ 1.69
CDHR3-210ENST00000474330 PLBD2Q8NHP8 589 aa25.63■■□□□ 1.69
CDHR3-210ENST00000474330 MEIS3Q99687 375 aa25.63■■□□□ 1.69
CDHR3-210ENST00000474330 ARFGEF2Q9Y6D5 1785 aa25.62■■□□□ 1.69
CDHR3-210ENST00000474330 ALDH1L1O75891 902 aa25.61■■□□□ 1.69
CDHR3-210ENST00000474330 IGHDP01880 384 aa25.61■■□□□ 1.69
CDHR3-210ENST00000474330 HMGB2P26583 209 aaKnown RBP25.6■■□□□ 1.69
CDHR3-210ENST00000474330 SMIM5Q71RC9 77 aa25.6■■□□□ 1.69
CDHR3-210ENST00000474330 LINS1Q8NG48 757 aa25.6■■□□□ 1.69
CDHR3-210ENST00000474330 SLC16A10Q8TF71 515 aa25.6■■□□□ 1.69
CDHR3-210ENST00000474330 METTL22Q9BUU2 404 aaPredicted RBP25.6■■□□□ 1.69
CDHR3-210ENST00000474330 RWDD1Q9H446 243 aaPredicted RBP25.6■■□□□ 1.69
CDHR3-210ENST00000474330 GNAI3P08754 354 aa25.59■■□□□ 1.69
CDHR3-210ENST00000474330 USP44Q9H0E7 712 aa25.59■■□□□ 1.69
CDHR3-210ENST00000474330 ZBTB1Q9Y2K1 713 aa25.59■■□□□ 1.69
CDHR3-210ENST00000474330 IBTKQ9P2D0 1353 aaPredicted RBP25.59■■□□□ 1.69
CDHR3-210ENST00000474330 CRKLP46109 303 aaKnown RBP25.59■■□□□ 1.69
CDHR3-210ENST00000474330 HDAC1Q13547 482 aaPredicted RBP25.59■■□□□ 1.69
CDHR3-210ENST00000474330 TTLL7Q6ZT98 887 aa25.59■■□□□ 1.69
CDHR3-210ENST00000474330 IL6STP40189 918 aaPredicted RBP25.58■■□□□ 1.69
CDHR3-210ENST00000474330 NEXNQ0ZGT2 675 aa25.58■■□□□ 1.69
CDHR3-210ENST00000474330 C1orf115Q9H7X2 142 aa25.58■■□□□ 1.69
CDHR3-210ENST00000474330 CCDC87Q9NVE4 849 aa25.58■■□□□ 1.69
CDHR3-210ENST00000474330 INTS5Q6P9B9 1019 aaKnown RBP25.57■■□□□ 1.68
CDHR3-210ENST00000474330 PPP1R1BQ9UD71 204 aaPredicted RBP25.57■■□□□ 1.68
CDHR3-210ENST00000474330 CNTNAP4Q9C0A0 1308 aa25.56■■□□□ 1.68
CDHR3-210ENST00000474330 AK7Q96M32 723 aa25.56■■□□□ 1.68
CDHR3-210ENST00000474330 GNAI2P04899 355 aa25.55■■□□□ 1.68
CDHR3-210ENST00000474330 IGKV5-2P06315 115 aa25.55■■□□□ 1.68
CDHR3-210ENST00000474330 MYD88Q99836 296 aa25.55■■□□□ 1.68
CDHR3-210ENST00000474330 CWF19L2Q2TBE0 894 aaKnown RBP25.54■■□□□ 1.68
CDHR3-210ENST00000474330 RPAP2Q8IXW5 612 aaPredicted RBP25.54■■□□□ 1.68
CDHR3-210ENST00000474330 ZNF330Q9Y3S2 320 aaPredicted RBP25.54■■□□□ 1.68
CDHR3-210ENST00000474330 MSH5O43196 834 aa25.53■■□□□ 1.68
CDHR3-210ENST00000474330 EIF5P55010 431 aaKnown RBP25.53■■□□□ 1.68
CDHR3-210ENST00000474330 FLAD1Q8NFF5 587 aa25.53■■□□□ 1.68
CDHR3-210ENST00000474330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.52■■□□□ 1.68
CDHR3-210ENST00000474330 NEURL1BA8MQ27 555 aa25.52■■□□□ 1.68
CDHR3-210ENST00000474330 UBTFL1P0CB47 393 aaPredicted RBP25.52■■□□□ 1.68
CDHR3-210ENST00000474330 RC3H1Q5TC82 1133 aaKnown RBP25.52■■□□□ 1.68
CDHR3-210ENST00000474330 KIF6Q6ZMV9 814 aa25.52■■□□□ 1.68
CDHR3-210ENST00000474330 AFDNP55196 1824 aaKnown RBP25.52■■□□□ 1.68
CDHR3-210ENST00000474330 SIRT2Q8IXJ6 389 aa25.52■■□□□ 1.68
CDHR3-210ENST00000474330 ANKRD44Q8N8A2 993 aa25.52■■□□□ 1.68
CDHR3-210ENST00000474330 ZBTB3Q9H5J0 574 aa25.52■■□□□ 1.68
CDHR3-210ENST00000474330 UTRNP46939 3433 aa25.51■■□□□ 1.67
CDHR3-210ENST00000474330 GNPATO15228 680 aa25.51■■□□□ 1.67
CDHR3-210ENST00000474330 PHF14O94880 888 aa25.51■■□□□ 1.67
CDHR3-210ENST00000474330 CEP85Q6P2H3 762 aa25.51■■□□□ 1.67
CDHR3-210ENST00000474330 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
CDHR3-210ENST00000474330 UTYO14607 1347 aa25.5■■□□□ 1.67
CDHR3-210ENST00000474330 MAP3K15Q6ZN16 1313 aa25.5■■□□□ 1.67
CDHR3-210ENST00000474330 NBPF7P0C2Y1 421 aaPredicted RBP25.5■■□□□ 1.67
CDHR3-210ENST00000474330 SSFA2P28290 1259 aa25.5■■□□□ 1.67
CDHR3-210ENST00000474330 ARXQ96QS3 562 aa25.5■■□□□ 1.67
CDHR3-210ENST00000474330 C9orf78Q9NZ63 289 aaPredicted RBP25.5■■□□□ 1.67
CDHR3-210ENST00000474330 GRM8O00222 908 aa25.49■■□□□ 1.67
CDHR3-210ENST00000474330 GCKRQ14397 625 aa25.49■■□□□ 1.67
CDHR3-210ENST00000474330 HDAC5Q9UQL6 1122 aa25.48■■□□□ 1.67
CDHR3-210ENST00000474330 GOLGB1Q14789 3259 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms