RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LGR6Q9HBX8 967 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 PRDM10Q9NQV6 1147 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 H0YIN7 160 aa7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 RNMTO43148 476 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 C7P10643 843 aa7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 MORC1Q86VD1 984 aa7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 C2CD5Q86YS7 1000 aa7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 VSIG10Q8N0Z9 540 aa7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 TIMELESSQ9UNS1 1208 aa7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 COL11A2P13942 1736 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-204ENST00000474025 UBR2Q8IWV8 1755 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 SCN7AQ01118 1682 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 POTEB2H3BUK9 544 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 TIE1P35590 1138 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 EIF5P55010 431 aaKnown RBP7□□□□□ -1.29
SNRNP40-204ENST00000474025 AIDAQ96BJ3 306 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 METRNQ9UJH8 293 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 CCDC88AQ3V6T2 1871 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 ANKRD31Q8N7Z5 1873 aa7□□□□□ -1.29
SNRNP40-204ENST00000474025 FER1L6Q2WGJ9 1857 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 C21orf2O43822 256 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 HSPA5P11021 654 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 CANXP27824 592 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 ERFEQ4G0M1 354 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 TBC1D9BQ66K14 1250 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 DPY19L2Q6NUT2 758 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 BICDL1Q6ZP65 573 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 BRIP1Q9BX63 1249 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 DICER1Q9UPY3 1922 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 VIRMAQ69YN4 1812 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 LTBP3Q9NS15 1303 aa6.99□□□□□ -1.29
SNRNP40-204ENST00000474025 CNTNAP1P78357 1384 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 TNRC18O15417 2968 aaPredicted RBP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 STARD3NLO95772 234 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 HMOX1P09601 288 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 PDE6BP35913 854 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 CTCFP49711 727 aaPredicted RBP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 ATN1P54259 1190 aaPredicted RBP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 EIF4G2P78344 907 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 MTHFSDQ2M296 383 aaKnown RBP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 PRR5LQ6MZQ0 368 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 ZNF622Q969S3 477 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 TAOK3Q9H2K8 898 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 BMP2KQ9NSY1 1161 aaPredicted RBP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 MKRN1Q9UHC7 482 aaKnown RBP6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 PDZRN3Q9UPQ7 1066 aa6.98□□□□□ -1.29
SNRNP40-204ENST00000474025 HEG1Q9ULI3 1381 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 A0A087WZG4 1122 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 FOXN1O15353 648 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 DDNO94850 711 aaPredicted RBP6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 TTC5Q8N0Z6 440 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 CCDC24Q8N4L8 307 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 OTUD5Q96G74 571 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 ZNF496Q96IT1 587 aaPredicted RBP6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 TRPC6Q9Y210 931 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 KNSTRNQ9Y448 316 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 PASKQ96RG2 1323 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 SLX4Q8IY92 1834 aa6.97□□□□□ -1.29
SNRNP40-204ENST00000474025 ARFGEF2Q9Y6D5 1785 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 CAMTA2O94983 1202 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 SRGNP10124 158 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 IL6STP40189 918 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 ZNF790Q6PG37 636 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 LDHDQ86WU2 507 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 CNBD1Q8NA66 436 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 L3MBTL3Q96JM7 780 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 TBC1D2BQ9UPU7 963 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 PCDHB13Q9Y5F0 798 aa6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 COL3A1P02461 1466 aaPredicted RBP6.96□□□□□ -1.3
SNRNP40-204ENST00000474025 SIPA1L3O60292 1781 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 BCORQ6W2J9 1755 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 IQCA1LA6NCM1 817 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 VASPP50552 380 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 ST5P78524 1137 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 IL17REQ8NFR9 667 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 CNKSR1Q969H4 720 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 MASTLQ96GX5 879 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 SETDB2Q96T68 719 aa6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 TEX13AQ9BXU3 409 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 TAF1DQ9H5J8 278 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 ZNF330Q9Y3S2 320 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-204ENST00000474025 SCN4AP35499 1836 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 CACNA1SQ13698 1873 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 DIAPH1O60610 1272 aaKnown RBP6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 ITGBL1O95965 494 aaPredicted RBP6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 A1BGP04217 495 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 VEGFBP49765 207 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 TEFQ10587 303 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 FAM161AQ3B820 660 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 ADAMTSL1Q8N6G6 1762 aa6.94□□□□□ -1.3
SNRNP40-204ENST00000474025 ZNF541Q9H0D2 1346 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms