RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 MYD88Q99836 296 aa13.54□□□□□ -0.24
TARDBP-206ENST00000473869 ZNF330Q9Y3S2 320 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-206ENST00000473869 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-206ENST00000473869 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-206ENST00000473869 NUCB1Q02818 461 aa13.54□□□□□ -0.24
TARDBP-206ENST00000473869 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
TARDBP-206ENST00000473869 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
TARDBP-206ENST00000473869 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
TARDBP-206ENST00000473869 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
TARDBP-206ENST00000473869 SIK1P57059 783 aa13.53□□□□□ -0.24
TARDBP-206ENST00000473869 TTLL7Q6ZT98 887 aa13.53□□□□□ -0.24
TARDBP-206ENST00000473869 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
TARDBP-206ENST00000473869 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
TARDBP-206ENST00000473869 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
TARDBP-206ENST00000473869 EP400Q96L91 3159 aa13.53□□□□□ -0.24
TARDBP-206ENST00000473869 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 GRM8O00222 908 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 IGKV5-2P06315 115 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 ATP8B2P98198 1209 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 KIF6Q6ZMV9 814 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.24
TARDBP-206ENST00000473869 IBTKQ9P2D0 1353 aaPredicted RBP13.52□□□□□ -0.24
TARDBP-206ENST00000473869 TJP1Q07157 1748 aa13.52□□□□□ -0.25
TARDBP-206ENST00000473869 GCKRQ14397 625 aa13.51□□□□□ -0.25
TARDBP-206ENST00000473869 PTF1AQ7RTS3 328 aa13.51□□□□□ -0.25
TARDBP-206ENST00000473869 ARXQ96QS3 562 aa13.51□□□□□ -0.25
TARDBP-206ENST00000473869 ZBTB3Q9H5J0 574 aa13.51□□□□□ -0.25
TARDBP-206ENST00000473869 UTYO14607 1347 aa13.51□□□□□ -0.25
TARDBP-206ENST00000473869 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
TARDBP-206ENST00000473869 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
TARDBP-206ENST00000473869 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
TARDBP-206ENST00000473869 PNMA6EA0A0J9YXQ4 647 aa13.5□□□□□ -0.25
TARDBP-206ENST00000473869 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
TARDBP-206ENST00000473869 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
TARDBP-206ENST00000473869 SBF2Q86WG5 1849 aa13.49□□□□□ -0.25
TARDBP-206ENST00000473869 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
TARDBP-206ENST00000473869 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
TARDBP-206ENST00000473869 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
TARDBP-206ENST00000473869 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
TARDBP-206ENST00000473869 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
TARDBP-206ENST00000473869 CRKLP46109 303 aaKnown RBP13.49□□□□□ -0.25
TARDBP-206ENST00000473869 SSH3Q8TE77 659 aa13.49□□□□□ -0.25
TARDBP-206ENST00000473869 CICQ96RK0 1608 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-206ENST00000473869 BTAF1O14981 1849 aa13.48□□□□□ -0.25
TARDBP-206ENST00000473869 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
TARDBP-206ENST00000473869 TRIM37O94972 964 aa13.48□□□□□ -0.25
TARDBP-206ENST00000473869 PDE4AP27815 886 aa13.48□□□□□ -0.25
TARDBP-206ENST00000473869 ITPK1Q13572 414 aa13.48□□□□□ -0.25
TARDBP-206ENST00000473869 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 A0A087WZG4 1122 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-206ENST00000473869 ZNF831Q5JPB2 1677 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 APBB1O00213 710 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 MTX1Q13505 466 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
TARDBP-206ENST00000473869 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
TARDBP-206ENST00000473869 POLA2Q14181 598 aa13.46□□□□□ -0.25
TARDBP-206ENST00000473869 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
TARDBP-206ENST00000473869 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
TARDBP-206ENST00000473869 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.25
TARDBP-206ENST00000473869 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
TARDBP-206ENST00000473869 DZIP3Q86Y13 1208 aaKnown RBP13.46□□□□□ -0.25
TARDBP-206ENST00000473869 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
TARDBP-206ENST00000473869 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
TARDBP-206ENST00000473869 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
TARDBP-206ENST00000473869 BCL11AQ9H165 835 aa13.45□□□□□ -0.26
TARDBP-206ENST00000473869 BICC1Q9H694 974 aaKnown RBP13.45□□□□□ -0.26
TARDBP-206ENST00000473869 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
TARDBP-206ENST00000473869 ERVV-1B6SEH8 477 aa13.45□□□□□ -0.26
TARDBP-206ENST00000473869 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
TARDBP-206ENST00000473869 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
TARDBP-206ENST00000473869 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
TARDBP-206ENST00000473869 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
TARDBP-206ENST00000473869 MYH14Q7Z406 1995 aaKnown RBP13.44□□□□□ -0.26
TARDBP-206ENST00000473869 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
TARDBP-206ENST00000473869 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
TARDBP-206ENST00000473869 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
TARDBP-206ENST00000473869 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-206ENST00000473869 RREB1Q92766 1687 aa13.44□□□□□ -0.26
TARDBP-206ENST00000473869 H7C1W4 665 aa13.43□□□□□ -0.26
TARDBP-206ENST00000473869 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
TARDBP-206ENST00000473869 KCNQ4P56696 695 aa13.43□□□□□ -0.26
TARDBP-206ENST00000473869 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
TARDBP-206ENST00000473869 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-206ENST00000473869 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-206ENST00000473869 COL15A1P39059 1388 aa13.43□□□□□ -0.26
TARDBP-206ENST00000473869 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-206ENST00000473869 HLFQ16534 295 aa13.43□□□□□ -0.26
TARDBP-206ENST00000473869 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
TARDBP-206ENST00000473869 CASP7P55210 303 aa13.42□□□□□ -0.26
TARDBP-206ENST00000473869 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
TARDBP-206ENST00000473869 NUP98P52948 1817 aa13.41□□□□□ -0.26
TARDBP-206ENST00000473869 C8orf34Q49A92 452 aa13.41□□□□□ -0.26
TARDBP-206ENST00000473869 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-206ENST00000473869 ANKRD36CQ5JPF3 1778 aa13.41□□□□□ -0.26
TARDBP-206ENST00000473869 GPTP24298 496 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms