RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 STYK1Q6J9G0 422 aa20.96■□□□□ 0.95
CCDC142-205ENST00000472962 DZIP3Q86Y13 1208 aaKnown RBP20.96■□□□□ 0.95
CCDC142-205ENST00000472962 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
CCDC142-205ENST00000472962 MASTLQ96GX5 879 aa20.96■□□□□ 0.95
CCDC142-205ENST00000472962 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
CCDC142-205ENST00000472962 BTBD11A6QL63 1104 aa20.95■□□□□ 0.94
CCDC142-205ENST00000472962 EAPPQ56P03 285 aaPredicted RBP20.95■□□□□ 0.94
CCDC142-205ENST00000472962 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.94
CCDC142-205ENST00000472962 IL17REQ8NFR9 667 aa20.95■□□□□ 0.94
CCDC142-205ENST00000472962 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
CCDC142-205ENST00000472962 LTBP3Q9NS15 1303 aa20.95■□□□□ 0.94
CCDC142-205ENST00000472962 AIDAQ96BJ3 306 aa20.94■□□□□ 0.94
CCDC142-205ENST00000472962 SCN4AP35499 1836 aa20.94■□□□□ 0.94
CCDC142-205ENST00000472962 BCORQ6W2J9 1755 aa20.93■□□□□ 0.94
CCDC142-205ENST00000472962 SRGNP10124 158 aa20.93■□□□□ 0.94
CCDC142-205ENST00000472962 PIP4K2AP48426 406 aaPredicted RBP20.93■□□□□ 0.94
CCDC142-205ENST00000472962 KIF7Q2M1P5 1343 aa20.93■□□□□ 0.94
CCDC142-205ENST00000472962 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
CCDC142-205ENST00000472962 LDHDQ86WU2 507 aa20.92■□□□□ 0.94
CCDC142-205ENST00000472962 ZNF652Q9Y2D9 606 aa20.92■□□□□ 0.94
CCDC142-205ENST00000472962 FAM177BA6PVY3 158 aa20.91■□□□□ 0.94
CCDC142-205ENST00000472962 CCDC93Q567U6 631 aa20.91■□□□□ 0.94
CCDC142-205ENST00000472962 KCNQ3O43525 872 aa20.89■□□□□ 0.93
CCDC142-205ENST00000472962 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
CCDC142-205ENST00000472962 TAF1DQ9H5J8 278 aaPredicted RBP20.89■□□□□ 0.93
CCDC142-205ENST00000472962 CNTNAP1P78357 1384 aa20.88■□□□□ 0.93
CCDC142-205ENST00000472962 FOXN1O15353 648 aa20.88■□□□□ 0.93
CCDC142-205ENST00000472962 NPR1P16066 1061 aa20.88■□□□□ 0.93
CCDC142-205ENST00000472962 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
CCDC142-205ENST00000472962 ZNF277Q9NRM2 450 aaPredicted RBP20.88■□□□□ 0.93
CCDC142-205ENST00000472962 USP16Q9Y5T5 823 aa20.88■□□□□ 0.93
CCDC142-205ENST00000472962 TMEM88BA6NKF7 163 aa20.87■□□□□ 0.93
CCDC142-205ENST00000472962 TPTE2Q6XPS3 522 aa20.87■□□□□ 0.93
CCDC142-205ENST00000472962 HACL1Q9UJ83 578 aa20.87■□□□□ 0.93
CCDC142-205ENST00000472962 NIP7Q9Y221 180 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC142-205ENST00000472962 PRKAR2BP31323 418 aa20.86■□□□□ 0.93
CCDC142-205ENST00000472962 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC142-205ENST00000472962 CFAP53Q96M91 514 aa20.86■□□□□ 0.93
CCDC142-205ENST00000472962 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
CCDC142-205ENST00000472962 CTCFP49711 727 aaPredicted RBP20.85■□□□□ 0.93
CCDC142-205ENST00000472962 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
CCDC142-205ENST00000472962 PASKQ96RG2 1323 aa20.84■□□□□ 0.93
CCDC142-205ENST00000472962 COL3A1P02461 1466 aaPredicted RBP20.84■□□□□ 0.93
CCDC142-205ENST00000472962 PRAMEF22A3QJZ6 481 aa20.84■□□□□ 0.93
CCDC142-205ENST00000472962 SNRPA1P09661 255 aaKnown RBP20.84■□□□□ 0.93
CCDC142-205ENST00000472962 EPHX2P34913 555 aa20.84■□□□□ 0.93
CCDC142-205ENST00000472962 VEGFBP49765 207 aa20.84■□□□□ 0.93
CCDC142-205ENST00000472962 RTKN2Q8IZC4 609 aa20.84■□□□□ 0.93
CCDC142-205ENST00000472962 L3MBTL3Q96JM7 780 aaPredicted RBP20.84■□□□□ 0.93
CCDC142-205ENST00000472962 ZNF541Q9H0D2 1346 aa20.83■□□□□ 0.93
CCDC142-205ENST00000472962 OLFM4Q6UX06 510 aa20.83■□□□□ 0.93
CCDC142-205ENST00000472962 PHACTR3Q96KR7 559 aa20.83■□□□□ 0.93
CCDC142-205ENST00000472962 PRDM10Q9NQV6 1147 aa20.83■□□□□ 0.93
CCDC142-205ENST00000472962 RNF123Q5XPI4 1314 aa20.82■□□□□ 0.92
CCDC142-205ENST00000472962 ALDH1B1P30837 517 aa20.82■□□□□ 0.92
CCDC142-205ENST00000472962 PNMA8AQ86V59 439 aaPredicted RBP20.82■□□□□ 0.92
CCDC142-205ENST00000472962 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
CCDC142-205ENST00000472962 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
CCDC142-205ENST00000472962 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
CCDC142-205ENST00000472962 IARSP41252 1262 aaKnown RBP20.81■□□□□ 0.92
CCDC142-205ENST00000472962 MCM10Q7L590 875 aa20.81■□□□□ 0.92
CCDC142-205ENST00000472962 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
CCDC142-205ENST00000472962 C7orf43Q8WVR3 580 aa20.81■□□□□ 0.92
CCDC142-205ENST00000472962 ABT1Q9ULW3 272 aaKnown RBP20.81■□□□□ 0.92
CCDC142-205ENST00000472962 LBX1P52954 281 aa20.8■□□□□ 0.92
CCDC142-205ENST00000472962 DEFB115Q30KQ5 88 aa20.8■□□□□ 0.92
CCDC142-205ENST00000472962 MAP1SQ66K74 1059 aaPredicted RBP20.8■□□□□ 0.92
CCDC142-205ENST00000472962 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
CCDC142-205ENST00000472962 CNTROBQ8N137 903 aa20.8■□□□□ 0.92
CCDC142-205ENST00000472962 NGEFQ8N5V2 710 aa20.8■□□□□ 0.92
CCDC142-205ENST00000472962 GJA3Q9Y6H8 435 aa20.8■□□□□ 0.92
CCDC142-205ENST00000472962 ITGBL1O95965 494 aaPredicted RBP20.79■□□□□ 0.92
CCDC142-205ENST00000472962 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
CCDC142-205ENST00000472962 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.921e-8■□□□□ 10.3
CCDC142-205ENST00000472962 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
CCDC142-205ENST00000472962 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
CCDC142-205ENST00000472962 EIF6P56537 245 aaKnown RBP20.78■□□□□ 0.92
CCDC142-205ENST00000472962 GRM1Q13255 1194 aa20.77■□□□□ 0.92
CCDC142-205ENST00000472962 DCTN1Q14203 1278 aa20.77■□□□□ 0.92
CCDC142-205ENST00000472962 GPC2Q8N158 579 aa20.76■□□□□ 0.91
CCDC142-205ENST00000472962 RPGRQ92834 1020 aaKnown RBP20.76■□□□□ 0.91
CCDC142-205ENST00000472962 NUP98P52948 1817 aa20.76■□□□□ 0.91
CCDC142-205ENST00000472962 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
CCDC142-205ENST00000472962 HLFQ16534 295 aa20.75■□□□□ 0.91
CCDC142-205ENST00000472962 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
CCDC142-205ENST00000472962 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
CCDC142-205ENST00000472962 BEGAINQ9BUH8 593 aa20.75■□□□□ 0.91
CCDC142-205ENST00000472962 NYXQ9GZU5 481 aa20.75■□□□□ 0.91
CCDC142-205ENST00000472962 WBP1LQ9NX94 342 aa20.75■□□□□ 0.91
CCDC142-205ENST00000472962 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
CCDC142-205ENST00000472962 KLRG2A4D1S0 409 aaPredicted RBP20.74■□□□□ 0.91
CCDC142-205ENST00000472962 FZD9O00144 591 aa20.74■□□□□ 0.91
CCDC142-205ENST00000472962 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
CCDC142-205ENST00000472962 MAP2K1Q02750 393 aaPredicted RBP20.74■□□□□ 0.91
CCDC142-205ENST00000472962 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
CCDC142-205ENST00000472962 WDR33Q9C0J8 1336 aaKnown RBP20.74■□□□□ 0.91
CCDC142-205ENST00000472962 LAMB4A4D0S4 1761 aa20.73■□□□□ 0.91
CCDC142-205ENST00000472962 ADAMTSL1Q8N6G6 1762 aa20.73■□□□□ 0.91
CCDC142-205ENST00000472962 RASSF10A6NK89 507 aa20.73■□□□□ 0.91
CCDC142-205ENST00000472962 NEFMP07197 916 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms