RNA–Protein interactions for RNA: ENST00000472827.1

LMBRD1-203, Transcript of LMBR1 domain containing 1, humanhuman

TSL 5

Gene LMBRD1, Length 1,861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1-203ENST00000472827 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 TBC1D9BQ66K14 1250 aa13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
LMBRD1-203ENST00000472827 RGL2O15211 777 aa13□□□□□ -0.33
LMBRD1-203ENST00000472827 PDE6BP35913 854 aa13□□□□□ -0.33
LMBRD1-203ENST00000472827 BRIP1Q9BX63 1249 aa13□□□□□ -0.33
LMBRD1-203ENST00000472827 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
LMBRD1-203ENST00000472827 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 UBR2Q8IWV8 1755 aa12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
LMBRD1-203ENST00000472827 COL11A2P13942 1736 aaPredicted RBP12.98□□□□□ -0.33
LMBRD1-203ENST00000472827 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
LMBRD1-203ENST00000472827 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
LMBRD1-203ENST00000472827 ST5P78524 1137 aa12.98□□□□□ -0.33
LMBRD1-203ENST00000472827 PRR5LQ6MZQ0 368 aa12.98□□□□□ -0.33
LMBRD1-203ENST00000472827 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
LMBRD1-203ENST00000472827 POTEIP0CG38 1075 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 SLX4Q8IY92 1834 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 PHACTR3Q96KR7 559 aa12.97□□□□□ -0.33
LMBRD1-203ENST00000472827 SCN7AQ01118 1682 aa12.96□□□□□ -0.33
LMBRD1-203ENST00000472827 RALBP1Q15311 655 aa12.96□□□□□ -0.33
LMBRD1-203ENST00000472827 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
LMBRD1-203ENST00000472827 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.34
LMBRD1-203ENST00000472827 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
LMBRD1-203ENST00000472827 CNBD1Q8NA66 436 aa12.95□□□□□ -0.34
LMBRD1-203ENST00000472827 FOXN1O15353 648 aa12.95□□□□□ -0.34
LMBRD1-203ENST00000472827 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
LMBRD1-203ENST00000472827 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
LMBRD1-203ENST00000472827 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
LMBRD1-203ENST00000472827 A1BGP04217 495 aa12.94□□□□□ -0.34
LMBRD1-203ENST00000472827 IQCA1LA6NCM1 817 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 SRGNP10124 158 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 MCM10Q7L590 875 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 CNTNAP1P78357 1384 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
LMBRD1-203ENST00000472827 SCN4AP35499 1836 aa12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 NFE2L2Q16236 605 aa12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 EAPPQ56P03 285 aaPredicted RBP12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 NBPF5PQ86XG9 351 aaPredicted RBP12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 TAF1DQ9H5J8 278 aaPredicted RBP12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 ARFGEF2Q9Y6D5 1785 aa12.92□□□□□ -0.34
LMBRD1-203ENST00000472827 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 PASKQ96RG2 1323 aa12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
LMBRD1-203ENST00000472827 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 VEGFBP49765 207 aa12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
LMBRD1-203ENST00000472827 BCORQ6W2J9 1755 aa12.9□□□□□ -0.35
LMBRD1-203ENST00000472827 KCNQ3O43525 872 aa12.89□□□□□ -0.35
LMBRD1-203ENST00000472827 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
LMBRD1-203ENST00000472827 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
LMBRD1-203ENST00000472827 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
LMBRD1-203ENST00000472827 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
LMBRD1-203ENST00000472827 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
LMBRD1-203ENST00000472827 ERVV-1B6SEH8 477 aa12.88□□□□□ -0.35
LMBRD1-203ENST00000472827 NPR1P16066 1061 aa12.88□□□□□ -0.35
LMBRD1-203ENST00000472827 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
LMBRD1-203ENST00000472827 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
LMBRD1-203ENST00000472827 FAM177BA6PVY3 158 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 EPHX2P34913 555 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 LBX1P52954 281 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 OLFM4Q6UX06 510 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 WDR43Q15061 677 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 PLEKHF1Q96S99 279 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 WBP1LQ9NX94 342 aa12.87□□□□□ -0.35
LMBRD1-203ENST00000472827 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
LMBRD1-203ENST00000472827 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
LMBRD1-203ENST00000472827 DEFB115Q30KQ5 88 aa12.86□□□□□ -0.35
LMBRD1-203ENST00000472827 RTKN2Q8IZC4 609 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms