RNA–Protein interactions for RNA: ENST00000471917.1

LPP-213, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-213ENST00000471917 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
LPP-213ENST00000471917 TNRC6CQ9HCJ0 1690 aaKnown RBP11.8□□□□□ -0.52
LPP-213ENST00000471917 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
LPP-213ENST00000471917 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
LPP-213ENST00000471917 MCM10Q7L590 875 aa11.79□□□□□ -0.52
LPP-213ENST00000471917 EYA1Q99502 592 aa11.79□□□□□ -0.52
LPP-213ENST00000471917 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
LPP-213ENST00000471917 SEC24BO95487 1268 aa11.78□□□□□ -0.52
LPP-213ENST00000471917 MTHFSDQ2M296 383 aaKnown RBP11.78□□□□□ -0.52
LPP-213ENST00000471917 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
LPP-213ENST00000471917 FLAD1Q8NFF5 587 aa11.78□□□□□ -0.52
LPP-213ENST00000471917 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
LPP-213ENST00000471917 CHMP4AQ9BY43 222 aa11.78□□□□□ -0.52
LPP-213ENST00000471917 AFDNP55196 1824 aaKnown RBP11.78□□□□□ -0.52
LPP-213ENST00000471917 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
LPP-213ENST00000471917 DEKP35659 375 aaKnown RBP11.77□□□□□ -0.53
LPP-213ENST00000471917 TSPYL4Q9UJ04 414 aa11.77□□□□□ -0.53
LPP-213ENST00000471917 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.53
LPP-213ENST00000471917 GNAT3A8MTJ3 354 aa11.76□□□□□ -0.53
LPP-213ENST00000471917 BMP2KLQ5H9B9 411 aa11.76□□□□□ -0.53
LPP-213ENST00000471917 ANKRD45Q5TZF3 282 aa11.76□□□□□ -0.53
LPP-213ENST00000471917 TIAM2Q8IVF5 1701 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
LPP-213ENST00000471917 SSFA2P28290 1259 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 CCT4P50991 539 aaKnown RBP11.75□□□□□ -0.53
LPP-213ENST00000471917 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 PIGBQ92521 554 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 STK31Q9BXU1 1019 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 LNPKQ9C0E8 428 aa11.75□□□□□ -0.53
LPP-213ENST00000471917 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
LPP-213ENST00000471917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
LPP-213ENST00000471917 CCDC30Q5VVM6 783 aa11.74□□□□□ -0.53
LPP-213ENST00000471917 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
LPP-213ENST00000471917 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
LPP-213ENST00000471917 DCTPP1Q9H773 170 aa11.74□□□□□ -0.53
LPP-213ENST00000471917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.535e-7■■■□□ 15.9
LPP-213ENST00000471917 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
LPP-213ENST00000471917 PCNTO95613 3336 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 KIF3CO14782 793 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 HMMRO75330 724 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 HSPA6P17066 643 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 MRC1P22897 1456 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 SIK1P57059 783 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 ITPK1Q13572 414 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
LPP-213ENST00000471917 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
LPP-213ENST00000471917 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
LPP-213ENST00000471917 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
LPP-213ENST00000471917 SMIM5Q71RC9 77 aa11.72□□□□□ -0.53
LPP-213ENST00000471917 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
LPP-213ENST00000471917 AK7Q96M32 723 aa11.72□□□□□ -0.53
LPP-213ENST00000471917 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
LPP-213ENST00000471917 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
LPP-213ENST00000471917 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
LPP-213ENST00000471917 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.54
LPP-213ENST00000471917 SCN7AQ01118 1682 aa11.71□□□□□ -0.54
LPP-213ENST00000471917 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
LPP-213ENST00000471917 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
LPP-213ENST00000471917 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
LPP-213ENST00000471917 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
LPP-213ENST00000471917 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
LPP-213ENST00000471917 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 CDC45O75419 566 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 PHF14O94880 888 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 GNAI3P08754 354 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 HOXB7P09629 217 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 PHKG2P15735 406 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 CEP85Q6P2H3 762 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
LPP-213ENST00000471917 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
LPP-213ENST00000471917 AMOTQ4VCS5 1084 aa11.68□□□□□ -0.54
LPP-213ENST00000471917 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
LPP-213ENST00000471917 HSCBQ8IWL3 235 aa11.68□□□□□ -0.54
LPP-213ENST00000471917 SNX21Q969T3 373 aa11.68□□□□□ -0.54
LPP-213ENST00000471917 ATG3Q9NT62 314 aa11.68□□□□□ -0.54
LPP-213ENST00000471917 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
LPP-213ENST00000471917 GNPATO15228 680 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 GNAI2P04899 355 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 MMP10P09238 476 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 CASC1Q6TDU7 716 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 PLEKHM2Q8IWE5 1019 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 SPG7Q9UQ90 795 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 FER1L6Q2WGJ9 1857 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 BCORQ6W2J9 1755 aa11.67□□□□□ -0.54
LPP-213ENST00000471917 KCPQ6ZWJ8 1503 aa11.66□□□□□ -0.54
LPP-213ENST00000471917 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
LPP-213ENST00000471917 FLIIQ13045 1269 aa11.66□□□□□ -0.54
LPP-213ENST00000471917 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
LPP-213ENST00000471917 MEIS3Q99687 375 aa11.66□□□□□ -0.54
LPP-213ENST00000471917 CEMIPQ8WUJ3 1361 aa11.66□□□□□ -0.54
LPP-213ENST00000471917 CACNA1FO60840 1977 aa11.65□□□□□ -0.54
LPP-213ENST00000471917 FKBP5Q13451 457 aaPredicted RBP11.65□□□□□ -0.54
LPP-213ENST00000471917 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms