RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
APLF-204ENST00000471727 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
APLF-204ENST00000471727 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 UNC5CLQ8IV45 518 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 RAD50Q92878 1312 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 BRPF3Q9ULD4 1205 aa12.88□□□□□ -0.35
APLF-204ENST00000471727 MEGF6O75095 1541 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 CABP4P57796 275 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 GCKRQ14397 625 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
APLF-204ENST00000471727 SUCLG2Q96I99 432 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
APLF-204ENST00000471727 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
APLF-204ENST00000471727 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 CYP27B1O15528 508 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 AIMP1Q12904 312 aaKnown RBP12.86□□□□□ -0.35
APLF-204ENST00000471727 SLC39A6Q13433 755 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 ZNF496Q96IT1 587 aaPredicted RBP12.86□□□□□ -0.35
APLF-204ENST00000471727 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
APLF-204ENST00000471727 BICC1Q9H694 974 aaKnown RBP12.86□□□□□ -0.35
APLF-204ENST00000471727 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
APLF-204ENST00000471727 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
APLF-204ENST00000471727 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
APLF-204ENST00000471727 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
APLF-204ENST00000471727 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
APLF-204ENST00000471727 PCDH11YQ9BZA8 1340 aa12.85□□□□□ -0.35
APLF-204ENST00000471727 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
APLF-204ENST00000471727 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 AACSQ86V21 672 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 COPRSQ9NQ92 184 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 PALD1Q9ULE6 856 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 MYL6BP14649 208 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 BRINP3Q76B58 766 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 ZGPATQ8N5A5 531 aaKnown RBP12.84□□□□□ -0.35
APLF-204ENST00000471727 PLBD2Q8NHP8 589 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
APLF-204ENST00000471727 DDX17Q92841 729 aaKnown RBP12.84□□□□□ -0.35
APLF-204ENST00000471727 KCNB2Q92953 911 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 MYD88Q99836 296 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
APLF-204ENST00000471727 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
APLF-204ENST00000471727 CRYBG1Q9Y4K1 1723 aa12.83□□□□□ -0.35
APLF-204ENST00000471727 SASH1O94885 1247 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 BRD1O95696 1058 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
APLF-204ENST00000471727 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
APLF-204ENST00000471727 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
APLF-204ENST00000471727 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
APLF-204ENST00000471727 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 SNX14Q9Y5W7 946 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
APLF-204ENST00000471727 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
APLF-204ENST00000471727 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
APLF-204ENST00000471727 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
APLF-204ENST00000471727 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
APLF-204ENST00000471727 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
APLF-204ENST00000471727 LMBRD1Q9NUN5 540 aa12.82□□□□□ -0.36
APLF-204ENST00000471727 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.82□□□□□ -0.36
APLF-204ENST00000471727 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
APLF-204ENST00000471727 MBD3O95983 291 aa12.81□□□□□ -0.36
APLF-204ENST00000471727 ZKSCAN1P17029 563 aaPredicted RBP12.81□□□□□ -0.36
APLF-204ENST00000471727 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
APLF-204ENST00000471727 ZNF445P59923 1031 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 EAF2Q96CJ1 260 aaPredicted RBP12.8□□□□□ -0.36
APLF-204ENST00000471727 TTC14Q96N46 770 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 WDR33Q9C0J8 1336 aaKnown RBP12.8□□□□□ -0.36
APLF-204ENST00000471727 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 PSMA5P28066 241 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
APLF-204ENST00000471727 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
APLF-204ENST00000471727 IL2RBP14784 551 aa12.79□□□□□ -0.36
APLF-204ENST00000471727 ATP5JP18859 108 aa12.79□□□□□ -0.36
APLF-204ENST00000471727 RNF20Q5VTR2 975 aa12.79□□□□□ -0.36
APLF-204ENST00000471727 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
APLF-204ENST00000471727 IL25Q9H293 177 aa12.79□□□□□ -0.36
APLF-204ENST00000471727 C5P01031 1676 aa12.79□□□□□ -0.36
APLF-204ENST00000471727 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
APLF-204ENST00000471727 A0A087WZG4 1122 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms