RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 NEURL1BA8MQ27 555 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 RBM6P78332 1123 aaKnown RBP14.95□□□□□ -0.02
LINC00880-201ENST00000471357 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
LINC00880-201ENST00000471357 TJP1Q07157 1748 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 RGS3P49796 1198 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 PTF1AQ7RTS3 328 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 DCTPP1Q9H773 170 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 ZBTB1Q9Y2K1 713 aa14.95□□□□□ -0.02
LINC00880-201ENST00000471357 GRM8O00222 908 aa14.94□□□□□ -0.02
LINC00880-201ENST00000471357 ZBTB3Q9H5J0 574 aa14.94□□□□□ -0.02
LINC00880-201ENST00000471357 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
LINC00880-201ENST00000471357 ITPK1Q13572 414 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 GCKRQ14397 625 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 KIF6Q6ZMV9 814 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 UTYO14607 1347 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 ARFGEF2Q9Y6D5 1785 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 NHSQ6T4R5 1651 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 NUCB1Q02818 461 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 CCDC87Q9NVE4 849 aa14.93□□□□□ -0.02
LINC00880-201ENST00000471357 CRKLP46109 303 aaKnown RBP14.92□□□□□ -0.02
LINC00880-201ENST00000471357 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
LINC00880-201ENST00000471357 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
LINC00880-201ENST00000471357 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
LINC00880-201ENST00000471357 INTS5Q6P9B9 1019 aaKnown RBP14.92□□□□□ -0.02
LINC00880-201ENST00000471357 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
LINC00880-201ENST00000471357 CICQ96RK0 1608 aaPredicted RBP14.91□□□□□ -0.02
LINC00880-201ENST00000471357 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
LINC00880-201ENST00000471357 CHD1LQ86WJ1 897 aa14.91□□□□□ -0.02
LINC00880-201ENST00000471357 ARXQ96QS3 562 aa14.91□□□□□ -0.02
LINC00880-201ENST00000471357 MAP3K15Q6ZN16 1313 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 EIF5P55010 431 aaKnown RBP14.9□□□□□ -0.02
LINC00880-201ENST00000471357 BCL11BQ9C0K0 894 aaPredicted RBP14.9□□□□□ -0.02
LINC00880-201ENST00000471357 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 BTAF1O14981 1849 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 NUP188Q5SRE5 1749 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 ZNF831Q5JPB2 1677 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 TCIRG1Q13488 830 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
LINC00880-201ENST00000471357 SBF2Q86WG5 1849 aa14.89□□□□□ -0.03
LINC00880-201ENST00000471357 RXRBP28702 533 aa14.89□□□□□ -0.03
LINC00880-201ENST00000471357 CCDC191Q8NCU4 936 aa14.89□□□□□ -0.03
LINC00880-201ENST00000471357 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
LINC00880-201ENST00000471357 SUCLG2Q96I99 432 aa14.89□□□□□ -0.03
LINC00880-201ENST00000471357 LNPKQ9C0E8 428 aa14.89□□□□□ -0.03
LINC00880-201ENST00000471357 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
LINC00880-201ENST00000471357 A0A087WZG4 1122 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 MTX1Q13505 466 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 GIGYF2Q6Y7W6 1299 aaKnown RBP14.88□□□□□ -0.03
LINC00880-201ENST00000471357 DZIP3Q86Y13 1208 aaKnown RBP14.88□□□□□ -0.03
LINC00880-201ENST00000471357 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 BRWD3Q6RI45 1802 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 SRGAP3O43295 1099 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 PDE4AP27815 886 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 POLA2Q14181 598 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 LINC00116Q8NCU8 138 aa14.88□□□□□ -0.03
LINC00880-201ENST00000471357 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
LINC00880-201ENST00000471357 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
LINC00880-201ENST00000471357 ERVV-1B6SEH8 477 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 H7C1W4 665 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
LINC00880-201ENST00000471357 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 KAZALD1Q96I82 304 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
LINC00880-201ENST00000471357 TBC1D2BQ9UPU7 963 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 RREB1Q92766 1687 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 KCNQ4P56696 695 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 HLFQ16534 295 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 UBE3BQ7Z3V4 1068 aa14.87□□□□□ -0.03
LINC00880-201ENST00000471357 BICC1Q9H694 974 aaKnown RBP14.87□□□□□ -0.03
LINC00880-201ENST00000471357 CNTNAP4Q9C0A0 1308 aa14.86□□□□□ -0.03
LINC00880-201ENST00000471357 COL5A3P25940 1745 aaPredicted RBP14.86□□□□□ -0.03
LINC00880-201ENST00000471357 JARID2Q92833 1246 aaPredicted RBP14.86□□□□□ -0.03
LINC00880-201ENST00000471357 MYH14Q7Z406 1995 aaKnown RBP14.86□□□□□ -0.03
LINC00880-201ENST00000471357 CASP7P55210 303 aa14.85□□□□□ -0.03
LINC00880-201ENST00000471357 RGS17Q9UGC6 210 aaPredicted RBP14.85□□□□□ -0.03
LINC00880-201ENST00000471357 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
LINC00880-201ENST00000471357 COL15A1P39059 1388 aa14.85□□□□□ -0.03
LINC00880-201ENST00000471357 APBB1O00213 710 aa14.85□□□□□ -0.03
LINC00880-201ENST00000471357 RC3H1Q5TC82 1133 aaKnown RBP14.85□□□□□ -0.03
LINC00880-201ENST00000471357 TRIM37O94972 964 aa14.84□□□□□ -0.03
LINC00880-201ENST00000471357 SURF6O75683 361 aaKnown RBP14.83□□□□□ -0.03
LINC00880-201ENST00000471357 EPHA10Q5JZY3 1008 aa14.83□□□□□ -0.03
LINC00880-201ENST00000471357 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.04
LINC00880-201ENST00000471357 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
LINC00880-201ENST00000471357 LRRCC1Q9C099 1032 aa14.83□□□□□ -0.04
LINC00880-201ENST00000471357 LY75O60449 1722 aa14.83□□□□□ -0.04
LINC00880-201ENST00000471357 RPS6KA4O75676 772 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 CAMTA2O94983 1202 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 RABL6Q3YEC7 729 aaPredicted RBP14.82□□□□□ -0.04
LINC00880-201ENST00000471357 HSP90AB4PQ58FF6 505 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 RTL5Q5HYW3 569 aaPredicted RBP14.82□□□□□ -0.04
LINC00880-201ENST00000471357 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 PCCAP05165 728 aaPredicted RBP14.82□□□□□ -0.04
LINC00880-201ENST00000471357 GPTP24298 496 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 FAM161AQ3B820 660 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 NLRP10Q86W26 655 aa14.82□□□□□ -0.04
LINC00880-201ENST00000471357 BACH2Q9BYV9 841 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms