RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	FAM161A	Q3B820	660 aa		32.36	■■■□□ 2.77
U2AF1-208	ENST00000471250	NUP188	Q5SRE5	1749 aa		32.36	■■■□□ 2.77
U2AF1-208	ENST00000471250		A0A0G2JS52	829 aa		32.34	■■■□□ 2.77
U2AF1-208	ENST00000471250	PNMA6E	A0A0J9YXQ4	647 aa		32.34	■■■□□ 2.77
U2AF1-208	ENST00000471250	MYT1	Q01538	1121 aa		32.34	■■■□□ 2.77
U2AF1-208	ENST00000471250	TTLL7	Q6ZT98	887 aa		32.34	■■■□□ 2.77
U2AF1-208	ENST00000471250	GRM8	O00222	908 aa		32.34	■■■□□ 2.77
U2AF1-208	ENST00000471250	CYP19A1	P11511	503 aa	Predicted RBP	32.34	■■■□□ 2.77
U2AF1-208	ENST00000471250	ONECUT3	O60422	494 aa	Predicted RBP	32.32	■■■□□ 2.76
U2AF1-208	ENST00000471250	SSH3	Q8TE77	659 aa		32.32	■■■□□ 2.76
U2AF1-208	ENST00000471250	GCKR	Q14397	625 aa		32.31	■■■□□ 2.76
U2AF1-208	ENST00000471250	C8orf34	Q49A92	452 aa		32.31	■■■□□ 2.76
U2AF1-208	ENST00000471250	AFDN	P55196	1824 aa	Known RBP	32.31	■■■□□ 2.76
U2AF1-208	ENST00000471250	POLA2	Q14181	598 aa		32.31	■■■□□ 2.76
U2AF1-208	ENST00000471250	SMARCC1	Q92922	1105 aa	Predicted RBP	32.31	■■■□□ 2.76
U2AF1-208	ENST00000471250	CIC	Q96RK0	1608 aa	Predicted RBP	32.31	■■■□□ 2.76
U2AF1-208	ENST00000471250	KCNQ2	O43526	872 aa		32.3	■■■□□ 2.76
U2AF1-208	ENST00000471250	PPP1R42	Q7Z4L9	355 aa		32.29	■■■□□ 2.76
U2AF1-208	ENST00000471250	MTX1	Q13505	466 aa		32.27	■■■□□ 2.76
U2AF1-208	ENST00000471250	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.27	■■■□□ 2.76
U2AF1-208	ENST00000471250	PALLD	Q8WX93	1383 aa		32.26	■■■□□ 2.76
U2AF1-208	ENST00000471250	LOC102724428	A0A0B4J2F2	783 aa		32.26	■■■□□ 2.75
U2AF1-208	ENST00000471250	SIK1	P57059	783 aa		32.26	■■■□□ 2.75
U2AF1-208	ENST00000471250	SUCLG2	Q96I99	432 aa		32.25	■■■□□ 2.75
U2AF1-208	ENST00000471250	ZBTB3	Q9H5J0	574 aa		32.24	■■■□□ 2.75
U2AF1-208	ENST00000471250	QTRT2	Q9H974	415 aa	Known RBP	32.24	■■■□□ 2.75
U2AF1-208	ENST00000471250	ATP5J2-PTCD1	G3V325	749 aa		32.24	■■■□□ 2.75
U2AF1-208	ENST00000471250	SRGAP3	O43295	1099 aa		32.24	■■■□□ 2.75
U2AF1-208	ENST00000471250	ZNF831	Q5JPB2	1677 aa		32.23	■■■□□ 2.75
U2AF1-208	ENST00000471250	ATP6V1A	P38606	617 aa		32.23	■■■□□ 2.75
U2AF1-208	ENST00000471250	KAZALD1	Q96I82	304 aa		32.23	■■■□□ 2.75
U2AF1-208	ENST00000471250	EXOC6B	Q9Y2D4	811 aa		32.23	■■■□□ 2.75
U2AF1-208	ENST00000471250	ZBTB1	Q9Y2K1	713 aa		32.23	■■■□□ 2.75
U2AF1-208	ENST00000471250	NHS	Q6T4R5	1651 aa		32.22	■■■□□ 2.75
U2AF1-208	ENST00000471250	KIF6	Q6ZMV9	814 aa		32.22	■■■□□ 2.75
U2AF1-208	ENST00000471250	COL15A1	P39059	1388 aa		32.21	■■■□□ 2.75
U2AF1-208	ENST00000471250	SEPT12	Q8IYM1	358 aa		32.21	■■■□□ 2.75
U2AF1-208	ENST00000471250	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.21	■■■□□ 2.75
U2AF1-208	ENST00000471250	RREB1	Q92766	1687 aa		32.2	■■■□□ 2.75
U2AF1-208	ENST00000471250	APBB1	O00213	710 aa		32.2	■■■□□ 2.74
U2AF1-208	ENST00000471250	SMARCA5	O60264	1052 aa	Predicted RBP	32.2	■■■□□ 2.74
U2AF1-208	ENST00000471250	IL6ST	P40189	918 aa	Predicted RBP	32.2	■■■□□ 2.74
U2AF1-208	ENST00000471250	MAP3K15	Q6ZN16	1313 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	ITPK1	Q13572	414 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	BICC1	Q9H694	974 aa	Known RBP	32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	CWC25	Q9NXE8	425 aa	Predicted RBP	32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250		A0A087WZG4	1122 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	RAB11FIP3	O75154	756 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	TCIRG1	Q13488	830 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	PLEKHM2	Q8IWE5	1019 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	CCDC191	Q8NCU4	936 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	ISCA1	Q9BUE6	129 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	LRRCC1	Q9C099	1032 aa		32.18	■■■□□ 2.74
U2AF1-208	ENST00000471250	CASP7	P55210	303 aa		32.17	■■■□□ 2.74
U2AF1-208	ENST00000471250	INTS5	Q6P9B9	1019 aa	Known RBP	32.17	■■■□□ 2.74
U2AF1-208	ENST00000471250	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.17	■■■□□ 2.74
U2AF1-208	ENST00000471250	CCDC87	Q9NVE4	849 aa		32.17	■■■□□ 2.74
U2AF1-208	ENST00000471250		H7C1W4	665 aa		32.16	■■■□□ 2.74
U2AF1-208	ENST00000471250	BTAF1	O14981	1849 aa		32.16	■■■□□ 2.74
U2AF1-208	ENST00000471250	SURF6	O75683	361 aa	Known RBP	32.15	■■■□□ 2.74
U2AF1-208	ENST00000471250	NOP58	Q9Y2X3	529 aa	Known RBP	32.15	■■■□□ 2.74
U2AF1-208	ENST00000471250	COL5A3	P25940	1745 aa	Predicted RBP	32.15	■■■□□ 2.74
U2AF1-208	ENST00000471250	CRKL	P46109	303 aa	Known RBP	32.15	■■■□□ 2.74
U2AF1-208	ENST00000471250	TRIM28	Q13263	835 aa	Known RBP	32.15	■■■□□ 2.74
U2AF1-208	ENST00000471250	UBE3B	Q7Z3V4	1068 aa		32.15	■■■□□ 2.74
U2AF1-208	ENST00000471250	SBF2	Q86WG5	1849 aa		32.14	■■■□□ 2.74
U2AF1-208	ENST00000471250	HSP90AB4P	Q58FF6	505 aa		32.14	■■■□□ 2.74
U2AF1-208	ENST00000471250	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.14	■■■□□ 2.74
U2AF1-208	ENST00000471250	EIF5	P55010	431 aa	Known RBP	32.13	■■■□□ 2.73
U2AF1-208	ENST00000471250	BMP2KL	Q5H9B9	411 aa		32.13	■■■□□ 2.73
U2AF1-208	ENST00000471250	FAM182B	Q5T319	152 aa		32.13	■■■□□ 2.73
U2AF1-208	ENST00000471250	PTF1A	Q7RTS3	328 aa		32.13	■■■□□ 2.73
U2AF1-208	ENST00000471250	EPHA10	Q5JZY3	1008 aa		32.12	■■■□□ 2.73
U2AF1-208	ENST00000471250	JARID2	Q92833	1246 aa	Predicted RBP	32.11	■■■□□ 2.73
U2AF1-208	ENST00000471250	ERVV-1	B6SEH8	477 aa		32.11	■■■□□ 2.73
U2AF1-208	ENST00000471250	NPM2	Q86SE8	214 aa	Known RBP	32.11	■■■□□ 2.73
U2AF1-208	ENST00000471250	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.11	■■■□□ 2.73
U2AF1-208	ENST00000471250	ARX	Q96QS3	562 aa		32.11	■■■□□ 2.73
U2AF1-208	ENST00000471250	RABL6	Q3YEC7	729 aa	Predicted RBP	32.1	■■■□□ 2.73
U2AF1-208	ENST00000471250	HSP90AB3P	Q58FF7	597 aa		32.1	■■■□□ 2.73
U2AF1-208	ENST00000471250	MYH14	Q7Z406	1995 aa	Known RBP	32.1	■■■□□ 2.73
U2AF1-208	ENST00000471250	DZIP3	Q86Y13	1208 aa	Known RBP	32.09	■■■□□ 2.73
U2AF1-208	ENST00000471250	ANKRD36C	Q5JPF3	1778 aa		32.08	■■■□□ 2.73
U2AF1-208	ENST00000471250	HLF	Q16534	295 aa		32.08	■■■□□ 2.73
U2AF1-208	ENST00000471250	KIF1BP	Q96EK5	621 aa		32.08	■■■□□ 2.73
U2AF1-208	ENST00000471250	RHPN1	Q8TCX5	695 aa		32.08	■■■□□ 2.73
U2AF1-208	ENST00000471250	NUP98	P52948	1817 aa		32.07	■■■□□ 2.72
U2AF1-208	ENST00000471250	OSBPL3	Q9H4L5	887 aa		32.07	■■■□□ 2.72
U2AF1-208	ENST00000471250	SALL3	Q9BXA9	1300 aa		32.07	■■■□□ 2.72
U2AF1-208	ENST00000471250	BCL11A	Q9H165	835 aa		32.06	■■■□□ 2.72
U2AF1-208	ENST00000471250	TTC22	Q5TAA0	569 aa		32.05	■■■□□ 2.72
U2AF1-208	ENST00000471250	ZNF772	Q68DY9	489 aa	Predicted RBP	32.05	■■■□□ 2.72
U2AF1-208	ENST00000471250	TBC1D2B	Q9UPU7	963 aa		32.05	■■■□□ 2.72
U2AF1-208	ENST00000471250	LINC00116	Q8NCU8	138 aa		32.05	■■■□□ 2.72
U2AF1-208	ENST00000471250	PA2G4	Q9UQ80	394 aa	Known RBP	32.05	■■■□□ 2.72
U2AF1-208	ENST00000471250	FOXO4	P98177	505 aa		32.04	■■■□□ 2.72
U2AF1-208	ENST00000471250	BRWD3	Q6RI45	1802 aa		32.04	■■■□□ 2.72
U2AF1-208	ENST00000471250	ERC1	Q8IUD2	1116 aa		32.03	■■■□□ 2.72
U2AF1-208	ENST00000471250	LY75	O60449	1722 aa		32.02	■■■□□ 2.72
U2AF1-208	ENST00000471250	CNTNAP4	Q9C0A0	1308 aa		32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms