RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SMG6Q86US8 1419 aaKnown RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 SETDB1Q15047 1291 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 MICALL1Q8N3F8 863 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 SEC62Q99442 399 aaKnown RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 ZNF287Q9HBT7 754 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 TATP17735 454 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-210ENST00000471181 GEN1Q17RS7 908 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 ZBTB9Q96C00 473 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 STAC3Q96MF2 364 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 HAUS7Q99871 368 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 RASAL2Q9UJF2 1139 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 NOB1Q9ULX3 412 aaKnown RBP7.9□□□□□ -1.14
BRCA1-210ENST00000471181 CUX2O14529 1486 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 NLRP5P59047 1200 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC89Q8N998 374 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 EEF2P13639 858 aaKnown RBP7.9□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC50Q8IVM0 306 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 WDR63Q8IWG1 891 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 TBC1D5Q92609 795 aa7.9□□□□□ -1.14
BRCA1-210ENST00000471181 GOLGA8AA7E2F4 631 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 GOLGA8BA8MQT2 603 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 PHACTR2O75167 634 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 CIB2O75838 187 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 SLC4A2P04920 1241 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC121Q6ZUS5 278 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 ANKS4BQ8N8V4 417 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 IDEP14735 1019 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 KIF5BP33176 963 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 CUL4BQ13620 913 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 CNNM3Q8NE01 707 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 GAS2L2Q8NHY3 880 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 DDX27Q96GQ7 796 aaKnown RBP7.9□□□□□ -1.15
BRCA1-210ENST00000471181 PHAXQ9H814 394 aaKnown RBP7.9□□□□□ -1.15
BRCA1-210ENST00000471181 SWAP70Q9UH65 585 aa7.9□□□□□ -1.15
BRCA1-210ENST00000471181 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.151e-6■■■■■ 58.5
BRCA1-210ENST00000471181 CARMIL2Q6F5E8 1435 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC194A0A1B0GVG4 234 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 RANBP6O60518 1105 aaKnown RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TACC1O75410 805 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 PSMD6Q15008 389 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TAF12Q16514 161 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 ESCO1Q5FWF5 840 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 GCC1Q96CN9 775 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 CALML4Q96GE6 196 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 FAM169AQ9Y6X4 670 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TTC21AQ8NDW8 1320 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 ESPNB1AK53 854 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 XPCQ01831 940 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 ABTB2Q8N961 1025 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TACC3Q9Y6A5 838 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 BCAR3O75815 825 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 ECM2O94769 699 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TWISTNBQ3B726 338 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 STXBP4Q6ZWJ1 553 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC12Q8WUD4 166 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 ANKIB1Q9P2G1 1089 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 FMN1Q68DA7 1419 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 STX6O43752 255 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 SSRP1Q08945 709 aaKnown RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 RASA3Q14644 834 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 IFI16Q16666 785 aaKnown RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TOM1L2Q6ZVM7 507 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC170Q8IYT3 715 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 ZNF444Q8N0Y2 327 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC77Q9BR77 488 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 TXNDC16Q9P2K2 825 aa7.89□□□□□ -1.15
BRCA1-210ENST00000471181 BIN1O00499 593 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 FAM160A1Q05DH4 1040 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 BIRC2Q13490 618 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 ATP2B3Q16720 1220 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 SLC4A8Q2Y0W8 1093 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 HDGFL1Q5TGJ6 251 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC65Q8IXS2 484 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CKAP2LQ8IYA6 745 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CABP2Q9NPB3 220 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CPSF2Q9P2I0 782 aaKnown RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 KRT32Q14532 448 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC14Q49A88 953 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 ISM2Q6H9L7 571 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CTCFLQ8NI51 663 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 VAT1LQ9HCJ6 419 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 KCNK9Q9NPC2 374 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 PRR16Q569H4 304 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC129Q6ZRS4 1044 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 NUTM1Q86Y26 1132 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 TRIM7Q9C029 511 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 RBM28Q9NW13 759 aaKnown RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 ANKFY1Q9P2R3 1169 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 RRBP1Q9P2E9 1410 aaKnown RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 SNW1Q13573 536 aaKnown RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CEP85LQ5SZL2 805 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 STMN4Q9H169 189 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 STIM2Q9P246 746 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 CEP126Q9P2H0 1117 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 RFX1P22670 979 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 METTL24Q5JXM2 366 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms