RNA–Protein interactions for RNA: ENST00000471158.1

RFT1-204, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-204ENST00000471158 KCNQ2O43526 872 aa15.04■□□□□ -0
RFT1-204ENST00000471158 ATP6V1AP38606 617 aa15.04■□□□□ -0
RFT1-204ENST00000471158 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
RFT1-204ENST00000471158 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
RFT1-204ENST00000471158 PIP4K2AP48426 406 aaPredicted RBP15.03■□□□□ -0
RFT1-204ENST00000471158 FAM196AQ6ZSG2 479 aa15.03■□□□□ -0
RFT1-204ENST00000471158 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
RFT1-204ENST00000471158 UTYO14607 1347 aa15.02■□□□□ -0
RFT1-204ENST00000471158 GRM8O00222 908 aa15.02■□□□□ -0
RFT1-204ENST00000471158 ATP8B2P98198 1209 aa15.02■□□□□ -0
RFT1-204ENST00000471158 KRT27Q7Z3Y8 459 aa15.02■□□□□ -0
RFT1-204ENST00000471158 SIRT2Q8IXJ6 389 aa15.02■□□□□ -0
RFT1-204ENST00000471158 MYD88Q99836 296 aa15.02■□□□□ -0
RFT1-204ENST00000471158 DCTPP1Q9H773 170 aa15.02■□□□□ -0
RFT1-204ENST00000471158 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
RFT1-204ENST00000471158 TJP1Q07157 1748 aa15.02□□□□□ -0.01
RFT1-204ENST00000471158 NEURL1BA8MQ27 555 aa15.01□□□□□ -0.01
RFT1-204ENST00000471158 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
RFT1-204ENST00000471158 BCL11BQ9C0K0 894 aaPredicted RBP15.01□□□□□ -0.01
RFT1-204ENST00000471158 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
RFT1-204ENST00000471158 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
RFT1-204ENST00000471158 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
RFT1-204ENST00000471158 ARFGEF2Q9Y6D5 1785 aa15.01□□□□□ -0.01
RFT1-204ENST00000471158 IGKV5-2P06315 115 aa15□□□□□ -0.01
RFT1-204ENST00000471158 NUCB1Q02818 461 aa15□□□□□ -0.01
RFT1-204ENST00000471158 GCKRQ14397 625 aa15□□□□□ -0.01
RFT1-204ENST00000471158 CWF19L2Q2TBE0 894 aaKnown RBP15□□□□□ -0.01
RFT1-204ENST00000471158 TTLL7Q6ZT98 887 aa15□□□□□ -0.01
RFT1-204ENST00000471158 A0A087WZG4 1122 aa14.99□□□□□ -0.01
RFT1-204ENST00000471158 ERVV-1B6SEH8 477 aa14.99□□□□□ -0.01
RFT1-204ENST00000471158 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
RFT1-204ENST00000471158 RXRBP28702 533 aa14.99□□□□□ -0.01
RFT1-204ENST00000471158 CCDC191Q8NCU4 936 aa14.99□□□□□ -0.01
RFT1-204ENST00000471158 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
RFT1-204ENST00000471158 BTAF1O14981 1849 aa14.99□□□□□ -0.01
RFT1-204ENST00000471158 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
RFT1-204ENST00000471158 NUP188Q5SRE5 1749 aa14.98□□□□□ -0.01
RFT1-204ENST00000471158 CRKLP46109 303 aaKnown RBP14.98□□□□□ -0.01
RFT1-204ENST00000471158 TRIM28Q13263 835 aaKnown RBP14.98□□□□□ -0.01
RFT1-204ENST00000471158 TCIRG1Q13488 830 aa14.98□□□□□ -0.01
RFT1-204ENST00000471158 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
RFT1-204ENST00000471158 CWC25Q9NXE8 425 aaPredicted RBP14.98□□□□□ -0.01
RFT1-204ENST00000471158 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
RFT1-204ENST00000471158 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
RFT1-204ENST00000471158 RGS3P49796 1198 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
RFT1-204ENST00000471158 MTX1Q13505 466 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 ITPK1Q13572 414 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 RC3H1Q5TC82 1133 aaKnown RBP14.97□□□□□ -0.01
RFT1-204ENST00000471158 ANKRD45Q5TZF3 282 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 INTS5Q6P9B9 1019 aaKnown RBP14.97□□□□□ -0.01
RFT1-204ENST00000471158 CHD1LQ86WJ1 897 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 SSH3Q8TE77 659 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 COL15A1P39059 1388 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 RREB1Q92766 1687 aa14.97□□□□□ -0.01
RFT1-204ENST00000471158 CNTNAP4Q9C0A0 1308 aa14.96□□□□□ -0.01
RFT1-204ENST00000471158 HSP90AB4PQ58FF6 505 aa14.96□□□□□ -0.01
RFT1-204ENST00000471158 GIGYF2Q6Y7W6 1299 aaKnown RBP14.96□□□□□ -0.01
RFT1-204ENST00000471158 ARXQ96QS3 562 aa14.96□□□□□ -0.01
RFT1-204ENST00000471158 AFDNP55196 1824 aaKnown RBP14.96□□□□□ -0.01
RFT1-204ENST00000471158 ATP5J2-PTCD1G3V325 749 aa14.95□□□□□ -0.02
RFT1-204ENST00000471158 RGL2O15211 777 aa14.95□□□□□ -0.02
RFT1-204ENST00000471158 FAM182BQ5T319 152 aa14.95□□□□□ -0.02
RFT1-204ENST00000471158 PPP1R42Q7Z4L9 355 aa14.95□□□□□ -0.02
RFT1-204ENST00000471158 DZIP3Q86Y13 1208 aaKnown RBP14.95□□□□□ -0.02
RFT1-204ENST00000471158 ISCA1Q9BUE6 129 aa14.95□□□□□ -0.02
RFT1-204ENST00000471158 CCNL1Q9UK58 526 aaPredicted RBP14.95□□□□□ -0.02
RFT1-204ENST00000471158 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
RFT1-204ENST00000471158 BRWD3Q6RI45 1802 aa14.94□□□□□ -0.02
RFT1-204ENST00000471158 H7C1W4 665 aa14.94□□□□□ -0.02
RFT1-204ENST00000471158 SRGAP3O43295 1099 aa14.94□□□□□ -0.02
RFT1-204ENST00000471158 RAB11FIP3O75154 756 aa14.94□□□□□ -0.02
RFT1-204ENST00000471158 POLA2Q14181 598 aa14.94□□□□□ -0.02
RFT1-204ENST00000471158 PNMA6EA0A0J9YXQ4 647 aa14.93□□□□□ -0.02
RFT1-204ENST00000471158 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
RFT1-204ENST00000471158 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
RFT1-204ENST00000471158 SUCLG2Q96I99 432 aa14.93□□□□□ -0.02
RFT1-204ENST00000471158 LY75O60449 1722 aa14.92□□□□□ -0.02
RFT1-204ENST00000471158 PTF1AQ7RTS3 328 aa14.92□□□□□ -0.02
RFT1-204ENST00000471158 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
RFT1-204ENST00000471158 LNPKQ9C0E8 428 aa14.92□□□□□ -0.02
RFT1-204ENST00000471158 ZNF652Q9Y2D9 606 aa14.92□□□□□ -0.02
RFT1-204ENST00000471158 CLEC4GQ6UXB4 293 aa14.91□□□□□ -0.02
RFT1-204ENST00000471158 BICC1Q9H694 974 aaKnown RBP14.91□□□□□ -0.02
RFT1-204ENST00000471158 TBC1D2BQ9UPU7 963 aa14.91□□□□□ -0.02
RFT1-204ENST00000471158 NOP58Q9Y2X3 529 aaKnown RBP14.91□□□□□ -0.02
RFT1-204ENST00000471158 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
RFT1-204ENST00000471158 SURF6O75683 361 aaKnown RBP14.9□□□□□ -0.02
RFT1-204ENST00000471158 PCCAP05165 728 aaPredicted RBP14.9□□□□□ -0.02
RFT1-204ENST00000471158 CASP7P55210 303 aa14.9□□□□□ -0.02
RFT1-204ENST00000471158 PARP10Q53GL7 1025 aa14.9□□□□□ -0.02
RFT1-204ENST00000471158 SKAP1Q86WV1 359 aa14.9□□□□□ -0.02
RFT1-204ENST00000471158 ERC1Q8IUD2 1116 aa14.9□□□□□ -0.02
RFT1-204ENST00000471158 ZBTB38Q8NAP3 1195 aaPredicted RBP14.9□□□□□ -0.02
RFT1-204ENST00000471158 LRRCC1Q9C099 1032 aa14.9□□□□□ -0.02
RFT1-204ENST00000471158 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
RFT1-204ENST00000471158 ANKRD36CQ5JPF3 1778 aa14.89□□□□□ -0.03
RFT1-204ENST00000471158 TRIM37O94972 964 aa14.89□□□□□ -0.03
RFT1-204ENST00000471158 HSP90B1P14625 803 aaKnown RBP14.89□□□□□ -0.03
RFT1-204ENST00000471158 HLFQ16534 295 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms