RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 MYD88Q99836 296 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
CCM2-204ENST00000470837 ZBTB3Q9H5J0 574 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
CCM2-204ENST00000470837 ADCY9O60503 1353 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 PLSCR1O15162 318 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 GNPATO15228 680 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 KCNQ4P56696 695 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 MAP3K15Q6ZN16 1313 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
CCM2-204ENST00000470837 ERVV-1B6SEH8 477 aa12.24□□□□□ -0.45
CCM2-204ENST00000470837 GNAI2P04899 355 aa12.24□□□□□ -0.45
CCM2-204ENST00000470837 EIF5P55010 431 aaKnown RBP12.24□□□□□ -0.45
CCM2-204ENST00000470837 TXNRD1Q16881 649 aa12.24□□□□□ -0.45
CCM2-204ENST00000470837 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
CCM2-204ENST00000470837 ZPR1O75312 459 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 RPS6KA4O75676 772 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 BAG6P46379 1132 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 MEIS3Q99687 375 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 BTAF1O14981 1849 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
CCM2-204ENST00000470837 COL15A1P39059 1388 aa12.22□□□□□ -0.45
CCM2-204ENST00000470837 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
CCM2-204ENST00000470837 ATP5J2-PTCD1G3V325 749 aa12.22□□□□□ -0.45
CCM2-204ENST00000470837 HMMRO75330 724 aa12.22□□□□□ -0.45
CCM2-204ENST00000470837 TCIRG1Q13488 830 aa12.22□□□□□ -0.45
CCM2-204ENST00000470837 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
CCM2-204ENST00000470837 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
CCM2-204ENST00000470837 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
CCM2-204ENST00000470837 CENPQQ7L2Z9 268 aaPredicted RBP12.22□□□□□ -0.45
CCM2-204ENST00000470837 CWC25Q9NXE8 425 aaPredicted RBP12.22□□□□□ -0.45
CCM2-204ENST00000470837 GRM8O00222 908 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 ADRA2BP18089 450 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 RFC4P35249 363 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 GCKRQ14397 625 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 RPAP2Q8IXW5 612 aaPredicted RBP12.21□□□□□ -0.45
CCM2-204ENST00000470837 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 USP44Q9H0E7 712 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 C1orf115Q9H7X2 142 aa12.21□□□□□ -0.45
CCM2-204ENST00000470837 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
CCM2-204ENST00000470837 PHF14O94880 888 aa12.2□□□□□ -0.46
CCM2-204ENST00000470837 IGKV5-2P06315 115 aa12.2□□□□□ -0.46
CCM2-204ENST00000470837 CCDC125Q86Z20 511 aa12.2□□□□□ -0.46
CCM2-204ENST00000470837 LRRC4BQ9NT99 713 aa12.2□□□□□ -0.46
CCM2-204ENST00000470837 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
CCM2-204ENST00000470837 TJP1Q07157 1748 aa12.2□□□□□ -0.46
CCM2-204ENST00000470837 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
CCM2-204ENST00000470837 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
CCM2-204ENST00000470837 RGL2O15211 777 aa12.19□□□□□ -0.46
CCM2-204ENST00000470837 HSP90B1P14625 803 aaKnown RBP12.19□□□□□ -0.46
CCM2-204ENST00000470837 TRIM28Q13263 835 aaKnown RBP12.19□□□□□ -0.46
CCM2-204ENST00000470837 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
CCM2-204ENST00000470837 FLAD1Q8NFF5 587 aa12.19□□□□□ -0.46
CCM2-204ENST00000470837 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
CCM2-204ENST00000470837 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
CCM2-204ENST00000470837 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
CCM2-204ENST00000470837 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 GPTP24298 496 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 SSFA2P28290 1259 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
CCM2-204ENST00000470837 HLFQ16534 295 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 ILDR2Q71H61 639 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 NARFQ9UHQ1 456 aa12.18□□□□□ -0.46
CCM2-204ENST00000470837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
CCM2-204ENST00000470837 NPHP1O15259 732 aa12.17□□□□□ -0.46
CCM2-204ENST00000470837 MSH5O43196 834 aa12.17□□□□□ -0.46
CCM2-204ENST00000470837 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
CCM2-204ENST00000470837 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
CCM2-204ENST00000470837 CEP85Q6P2H3 762 aa12.17□□□□□ -0.46
CCM2-204ENST00000470837 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
CCM2-204ENST00000470837 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
CCM2-204ENST00000470837 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
CCM2-204ENST00000470837 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
CCM2-204ENST00000470837 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
CCM2-204ENST00000470837 NIP7Q9Y221 180 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCM2-204ENST00000470837 UTYO14607 1347 aa12.16□□□□□ -0.46
CCM2-204ENST00000470837 GTF2E1P29083 439 aaPredicted RBP12.16□□□□□ -0.46
CCM2-204ENST00000470837 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
CCM2-204ENST00000470837 PROM2Q8N271 834 aa12.16□□□□□ -0.46
CCM2-204ENST00000470837 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
CCM2-204ENST00000470837 GCC1Q96CN9 775 aa12.16□□□□□ -0.46
CCM2-204ENST00000470837 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
CCM2-204ENST00000470837 H7C1W4 665 aa12.15□□□□□ -0.46
CCM2-204ENST00000470837 SRGAP3O43295 1099 aa12.15□□□□□ -0.46
CCM2-204ENST00000470837 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
CCM2-204ENST00000470837 ATP8B2P98198 1209 aa12.15□□□□□ -0.46
CCM2-204ENST00000470837 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
CCM2-204ENST00000470837 NLRP10Q86W26 655 aa12.15□□□□□ -0.46
CCM2-204ENST00000470837 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
CCM2-204ENST00000470837 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms