RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
LMCD1-207ENST00000470776 ITPK1Q13572 414 aa11.2□□□□□ -0.62
LMCD1-207ENST00000470776 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
LMCD1-207ENST00000470776 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
LMCD1-207ENST00000470776 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
LMCD1-207ENST00000470776 RPAP2Q8IXW5 612 aaPredicted RBP11.2□□□□□ -0.62
LMCD1-207ENST00000470776 TJP1Q07157 1748 aa11.19□□□□□ -0.62
LMCD1-207ENST00000470776 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
LMCD1-207ENST00000470776 PIP4K2AP48426 406 aaPredicted RBP11.19□□□□□ -0.62
LMCD1-207ENST00000470776 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
LMCD1-207ENST00000470776 TTLL7Q6ZT98 887 aa11.19□□□□□ -0.62
LMCD1-207ENST00000470776 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
LMCD1-207ENST00000470776 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
LMCD1-207ENST00000470776 ZBTB1Q9Y2K1 713 aa11.19□□□□□ -0.62
LMCD1-207ENST00000470776 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
LMCD1-207ENST00000470776 CNTNAP4Q9C0A0 1308 aa11.18□□□□□ -0.62
LMCD1-207ENST00000470776 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
LMCD1-207ENST00000470776 TRIM28Q13263 835 aaKnown RBP11.18□□□□□ -0.62
LMCD1-207ENST00000470776 SIRT2Q8IXJ6 389 aa11.18□□□□□ -0.62
LMCD1-207ENST00000470776 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
LMCD1-207ENST00000470776 RREB1Q92766 1687 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 RGL2O15211 777 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 GNAI2P04899 355 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 CRKLP46109 303 aaKnown RBP11.17□□□□□ -0.62
LMCD1-207ENST00000470776 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 TCIRG1Q13488 830 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 HDAC5Q9UQL6 1122 aa11.17□□□□□ -0.62
LMCD1-207ENST00000470776 COL15A1P39059 1388 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 HMGB2P26583 209 aaKnown RBP11.16□□□□□ -0.62
LMCD1-207ENST00000470776 ATP8B2P98198 1209 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 GCKRQ14397 625 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 MYD88Q99836 296 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
LMCD1-207ENST00000470776 GRM8O00222 908 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 PLSCR1O15162 318 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 NBPF7P0C2Y1 421 aaPredicted RBP11.15□□□□□ -0.62
LMCD1-207ENST00000470776 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
LMCD1-207ENST00000470776 CASP7P55210 303 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 MTX1Q13505 466 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 CWF19L2Q2TBE0 894 aaKnown RBP11.15□□□□□ -0.62
LMCD1-207ENST00000470776 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
LMCD1-207ENST00000470776 CCDC191Q8NCU4 936 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 GCC1Q96CN9 775 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
LMCD1-207ENST00000470776 BTAF1O14981 1849 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 H7C1W4 665 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 RPS6KA4O75676 772 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 TRIM37O94972 964 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 SLC27A3Q5K4L6 730 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 KIF6Q6ZMV9 814 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 DCTPP1Q9H773 170 aa11.14□□□□□ -0.63
LMCD1-207ENST00000470776 CCNL1Q9UK58 526 aaPredicted RBP11.14□□□□□ -0.63
LMCD1-207ENST00000470776 LY75O60449 1722 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 COL5A3P25940 1745 aaPredicted RBP11.13□□□□□ -0.63
LMCD1-207ENST00000470776 A0A087WZG4 1122 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 HMMRO75330 724 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 POLA2Q14181 598 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
LMCD1-207ENST00000470776 SSH3Q8TE77 659 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 KAZALD1Q96I82 304 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
LMCD1-207ENST00000470776 C9orf78Q9NZ63 289 aaPredicted RBP11.13□□□□□ -0.63
LMCD1-207ENST00000470776 LRRFIP2Q9Y608 721 aaKnown RBP11.13□□□□□ -0.63
LMCD1-207ENST00000470776 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
LMCD1-207ENST00000470776 CAMTA2O94983 1202 aa11.12□□□□□ -0.63
LMCD1-207ENST00000470776 HLFQ16534 295 aa11.12□□□□□ -0.63
LMCD1-207ENST00000470776 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
LMCD1-207ENST00000470776 LRRC4BQ9NT99 713 aa11.12□□□□□ -0.63
LMCD1-207ENST00000470776 CWC25Q9NXE8 425 aaPredicted RBP11.12□□□□□ -0.63
LMCD1-207ENST00000470776 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
LMCD1-207ENST00000470776 NUCB1Q02818 461 aa11.11□□□□□ -0.63
LMCD1-207ENST00000470776 RABL6Q3YEC7 729 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-207ENST00000470776 CLEC4GQ6UXB4 293 aa11.11□□□□□ -0.63
LMCD1-207ENST00000470776 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
LMCD1-207ENST00000470776 PROM2Q8N271 834 aa11.11□□□□□ -0.63
LMCD1-207ENST00000470776 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
LMCD1-207ENST00000470776 PDZRN3Q9UPQ7 1066 aa11.11□□□□□ -0.63
LMCD1-207ENST00000470776 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
LMCD1-207ENST00000470776 PNMA6EA0A0J9YXQ4 647 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 PCCAP05165 728 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-207ENST00000470776 KCNQ4P56696 695 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 TXNRD1Q16881 649 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 DEFB132Q7Z7B7 95 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 TBC1D2BQ9UPU7 963 aa11.1□□□□□ -0.63
LMCD1-207ENST00000470776 PPP1R42Q7Z4L9 355 aa11.09□□□□□ -0.63
LMCD1-207ENST00000470776 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
LMCD1-207ENST00000470776 NOP58Q9Y2X3 529 aaKnown RBP11.09□□□□□ -0.63
LMCD1-207ENST00000470776 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
LMCD1-207ENST00000470776 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-207ENST00000470776 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms