RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
HIGD1A-205ENST00000470543 IL6STP40189 918 aaPredicted RBP16.9■□□□□ 0.3
HIGD1A-205ENST00000470543 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
HIGD1A-205ENST00000470543 TAF1DQ9H5J8 278 aaPredicted RBP16.9■□□□□ 0.3
HIGD1A-205ENST00000470543 PASKQ96RG2 1323 aa16.9■□□□□ 0.3
HIGD1A-205ENST00000470543 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
HIGD1A-205ENST00000470543 VEGFBP49765 207 aa16.89■□□□□ 0.29
HIGD1A-205ENST00000470543 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
HIGD1A-205ENST00000470543 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.29
HIGD1A-205ENST00000470543 SRGNP10124 158 aa16.88■□□□□ 0.29
HIGD1A-205ENST00000470543 ZNF790Q6PG37 636 aa16.88■□□□□ 0.29
HIGD1A-205ENST00000470543 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
HIGD1A-205ENST00000470543 LBX1P52954 281 aa16.87■□□□□ 0.29
HIGD1A-205ENST00000470543 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
HIGD1A-205ENST00000470543 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
HIGD1A-205ENST00000470543 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
HIGD1A-205ENST00000470543 HACL1Q9UJ83 578 aa16.87■□□□□ 0.29
HIGD1A-205ENST00000470543 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
HIGD1A-205ENST00000470543 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
HIGD1A-205ENST00000470543 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
HIGD1A-205ENST00000470543 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
HIGD1A-205ENST00000470543 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
HIGD1A-205ENST00000470543 ABT1Q9ULW3 272 aaKnown RBP16.85■□□□□ 0.29
HIGD1A-205ENST00000470543 ZNF652Q9Y2D9 606 aa16.85■□□□□ 0.29
HIGD1A-205ENST00000470543 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 A1BGP04217 495 aa16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 NPR1P16066 1061 aa16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 EPHX2P34913 555 aa16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 ZNF277Q9NRM2 450 aaPredicted RBP16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 WBP1LQ9NX94 342 aa16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
HIGD1A-205ENST00000470543 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
HIGD1A-205ENST00000470543 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
HIGD1A-205ENST00000470543 DEFB115Q30KQ5 88 aa16.83■□□□□ 0.28
HIGD1A-205ENST00000470543 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.28
HIGD1A-205ENST00000470543 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
HIGD1A-205ENST00000470543 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
HIGD1A-205ENST00000470543 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
HIGD1A-205ENST00000470543 RTKN2Q8IZC4 609 aa16.82■□□□□ 0.28
HIGD1A-205ENST00000470543 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
HIGD1A-205ENST00000470543 BEGAINQ9BUH8 593 aa16.82■□□□□ 0.28
HIGD1A-205ENST00000470543 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
HIGD1A-205ENST00000470543 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
HIGD1A-205ENST00000470543 MAP1SQ66K74 1059 aaPredicted RBP16.81■□□□□ 0.28
HIGD1A-205ENST00000470543 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
HIGD1A-205ENST00000470543 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 RASSF10A6NK89 507 aa16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 BTBD11A6QL63 1104 aa16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
HIGD1A-205ENST00000470543 SLC34A2O95436 690 aa16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 IARSP41252 1262 aaKnown RBP16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 GRM1Q13255 1194 aa16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 CLEC4GQ6UXB4 293 aa16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 TPTE2Q6XPS3 522 aa16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 NIP7Q9Y221 180 aaKnown RBP eCLIP16.79■□□□□ 0.28
HIGD1A-205ENST00000470543 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
HIGD1A-205ENST00000470543 OLFM4Q6UX06 510 aa16.78■□□□□ 0.28
HIGD1A-205ENST00000470543 GPC2Q8N158 579 aa16.78■□□□□ 0.28
HIGD1A-205ENST00000470543 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
HIGD1A-205ENST00000470543 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
HIGD1A-205ENST00000470543 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
HIGD1A-205ENST00000470543 ALDH1B1P30837 517 aa16.77■□□□□ 0.28
HIGD1A-205ENST00000470543 ECE1P42892 770 aa16.77■□□□□ 0.28
HIGD1A-205ENST00000470543 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
HIGD1A-205ENST00000470543 TRPM7Q96QT4 1865 aa16.77■□□□□ 0.27
HIGD1A-205ENST00000470543 THSD7BQ9C0I4 1608 aa16.77■□□□□ 0.27
HIGD1A-205ENST00000470543 COL3A1P02461 1466 aaPredicted RBP16.76■□□□□ 0.27
HIGD1A-205ENST00000470543 KCNQ3O43525 872 aa16.76■□□□□ 0.27
HIGD1A-205ENST00000470543 SYNE4Q8N205 404 aa16.76■□□□□ 0.27
HIGD1A-205ENST00000470543 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
HIGD1A-205ENST00000470543 FZD9O00144 591 aa16.75■□□□□ 0.27
HIGD1A-205ENST00000470543 CAPNS2Q96L46 248 aa16.75■□□□□ 0.27
HIGD1A-205ENST00000470543 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
HIGD1A-205ENST00000470543 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
HIGD1A-205ENST00000470543 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
HIGD1A-205ENST00000470543 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
HIGD1A-205ENST00000470543 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
HIGD1A-205ENST00000470543 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
HIGD1A-205ENST00000470543 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
HIGD1A-205ENST00000470543 KIF7Q2M1P5 1343 aa16.73■□□□□ 0.27
HIGD1A-205ENST00000470543 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
HIGD1A-205ENST00000470543 PSMD1Q99460 953 aa16.73■□□□□ 0.27
HIGD1A-205ENST00000470543 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
HIGD1A-205ENST00000470543 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
HIGD1A-205ENST00000470543 PRKAR2BP31323 418 aa16.72■□□□□ 0.27
HIGD1A-205ENST00000470543 LTBP1Q14766 1721 aa16.71■□□□□ 0.27
HIGD1A-205ENST00000470543 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
HIGD1A-205ENST00000470543 CYP4F22Q6NT55 531 aa16.71■□□□□ 0.27
HIGD1A-205ENST00000470543 LARGE2Q8N3Y3 721 aa16.71■□□□□ 0.27
HIGD1A-205ENST00000470543 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
HIGD1A-205ENST00000470543 GPR101Q96P66 508 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms