RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 SEC24BO95487 1268 aa18.32■□□□□ 0.52
SCYL3-205ENST00000470238 GCKRQ14397 625 aa18.32■□□□□ 0.52
SCYL3-205ENST00000470238 VPS72Q15906 364 aa18.32■□□□□ 0.52
SCYL3-205ENST00000470238 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
SCYL3-205ENST00000470238 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
SCYL3-205ENST00000470238 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
SCYL3-205ENST00000470238 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
SCYL3-205ENST00000470238 MSH5O43196 834 aa18.3■□□□□ 0.52
SCYL3-205ENST00000470238 PRIM1P49642 420 aaKnown RBP18.3■□□□□ 0.52
SCYL3-205ENST00000470238 TTC22Q5TAA0 569 aa18.3■□□□□ 0.52
SCYL3-205ENST00000470238 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
SCYL3-205ENST00000470238 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
SCYL3-205ENST00000470238 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
SCYL3-205ENST00000470238 DNAJC10Q8IXB1 793 aa18.29■□□□□ 0.52
SCYL3-205ENST00000470238 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
SCYL3-205ENST00000470238 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
SCYL3-205ENST00000470238 MARCH10Q8NA82 808 aaPredicted RBP18.28■□□□□ 0.52
SCYL3-205ENST00000470238 OTUD7AQ8TE49 926 aaPredicted RBP18.28■□□□□ 0.52
SCYL3-205ENST00000470238 SUCLG2Q96I99 432 aa18.28■□□□□ 0.52
SCYL3-205ENST00000470238 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
SCYL3-205ENST00000470238 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
SCYL3-205ENST00000470238 OSBPL3Q9H4L5 887 aa18.28■□□□□ 0.52
SCYL3-205ENST00000470238 EIF5BO60841 1220 aaKnown RBP18.27■□□□□ 0.51
SCYL3-205ENST00000470238 GSPT1P15170 499 aaKnown RBP18.27■□□□□ 0.51
SCYL3-205ENST00000470238 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.51
SCYL3-205ENST00000470238 BICC1Q9H694 974 aaKnown RBP18.27■□□□□ 0.51
SCYL3-205ENST00000470238 NOP58Q9Y2X3 529 aaKnown RBP18.27■□□□□ 0.51
SCYL3-205ENST00000470238 COL15A1P39059 1388 aa18.27■□□□□ 0.51
SCYL3-205ENST00000470238 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
SCYL3-205ENST00000470238 CDC45O75419 566 aa18.26■□□□□ 0.51
SCYL3-205ENST00000470238 PDE1AP54750 535 aa18.26■□□□□ 0.51
SCYL3-205ENST00000470238 FAM98CQ17RN3 349 aaKnown RBP18.26■□□□□ 0.51
SCYL3-205ENST00000470238 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
SCYL3-205ENST00000470238 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
SCYL3-205ENST00000470238 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
SCYL3-205ENST00000470238 TBC1D32Q96NH3 1257 aa18.25■□□□□ 0.51
SCYL3-205ENST00000470238 SALL3Q9BXA9 1300 aa18.25■□□□□ 0.51
SCYL3-205ENST00000470238 MX1P20591 662 aa18.24■□□□□ 0.51
SCYL3-205ENST00000470238 MFAP1P55081 439 aaKnown RBP18.24■□□□□ 0.51
SCYL3-205ENST00000470238 OS9Q13438 667 aaPredicted RBP18.24■□□□□ 0.51
SCYL3-205ENST00000470238 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
SCYL3-205ENST00000470238 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
SCYL3-205ENST00000470238 CWC25Q9NXE8 425 aaPredicted RBP18.24■□□□□ 0.51
SCYL3-205ENST00000470238 USP21Q9UK80 565 aa18.24■□□□□ 0.51
SCYL3-205ENST00000470238 KAT6BQ8WYB5 2073 aa18.24■□□□□ 0.51
SCYL3-205ENST00000470238 A0A087WZG4 1122 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
SCYL3-205ENST00000470238 TBC1D9Q6ZT07 1266 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 SLC4A9Q96Q91 983 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 AOX1Q06278 1338 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 A0A0G2JS52 829 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 CCDC191Q8NCU4 936 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
SCYL3-205ENST00000470238 TJP1Q07157 1748 aa18.22■□□□□ 0.51
SCYL3-205ENST00000470238 HSPA1LP34931 641 aa18.22■□□□□ 0.51
SCYL3-205ENST00000470238 MEX3CQ5U5Q3 659 aaKnown RBP18.22■□□□□ 0.51
SCYL3-205ENST00000470238 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
SCYL3-205ENST00000470238 ZNF330Q9Y3S2 320 aaPredicted RBP18.22■□□□□ 0.51
SCYL3-205ENST00000470238 H7C1W4 665 aa18.21■□□□□ 0.51
SCYL3-205ENST00000470238 SDSP20132 328 aa18.21■□□□□ 0.51
SCYL3-205ENST00000470238 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
SCYL3-205ENST00000470238 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
SCYL3-205ENST00000470238 CASP7P55210 303 aa18.2■□□□□ 0.5
SCYL3-205ENST00000470238 RABL6Q3YEC7 729 aaPredicted RBP18.2■□□□□ 0.5
SCYL3-205ENST00000470238 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
SCYL3-205ENST00000470238 G3BP1Q13283 466 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCYL3-205ENST00000470238 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
SCYL3-205ENST00000470238 EPHA10Q5JZY3 1008 aa18.19■□□□□ 0.5
SCYL3-205ENST00000470238 ISCA1Q9BUE6 129 aa18.19■□□□□ 0.5
SCYL3-205ENST00000470238 DAXXQ9UER7 740 aaPredicted RBP18.19■□□□□ 0.5
SCYL3-205ENST00000470238 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
SCYL3-205ENST00000470238 MAP3K15Q6ZN16 1313 aa18.19■□□□□ 0.5
SCYL3-205ENST00000470238 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
SCYL3-205ENST00000470238 MYT1Q01538 1121 aa18.18■□□□□ 0.5
SCYL3-205ENST00000470238 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
SCYL3-205ENST00000470238 CLASRPQ8N2M8 674 aaKnown RBP18.18■□□□□ 0.5
SCYL3-205ENST00000470238 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
SCYL3-205ENST00000470238 HSP90AB3PQ58FF7 597 aa18.18■□□□□ 0.5
SCYL3-205ENST00000470238 JARID2Q92833 1246 aaPredicted RBP18.18■□□□□ 0.5
SCYL3-205ENST00000470238 ZBTB1Q9Y2K1 713 aa18.18■□□□□ 0.5
SCYL3-205ENST00000470238 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
SCYL3-205ENST00000470238 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
SCYL3-205ENST00000470238 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
SCYL3-205ENST00000470238 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
SCYL3-205ENST00000470238 SIK1P57059 783 aa18.17■□□□□ 0.5
SCYL3-205ENST00000470238 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
SCYL3-205ENST00000470238 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
SCYL3-205ENST00000470238 ARXQ96QS3 562 aa18.16■□□□□ 0.5
SCYL3-205ENST00000470238 COPRSQ9NQ92 184 aa18.16■□□□□ 0.5
SCYL3-205ENST00000470238 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
SCYL3-205ENST00000470238 TSHZ3Q63HK5 1081 aa18.15■□□□□ 0.5
SCYL3-205ENST00000470238 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
SCYL3-205ENST00000470238 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
SCYL3-205ENST00000470238 TTC41PQ6P2S7 1318 aa18.15■□□□□ 0.5
SCYL3-205ENST00000470238 TUBGCP6Q96RT7 1819 aa18.15■□□□□ 0.5
SCYL3-205ENST00000470238 ERVV-1B6SEH8 477 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms