RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
CCNL1-212ENST00000470121 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
CCNL1-212ENST00000470121 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
CCNL1-212ENST00000470121 BICC1Q9H694 974 aaKnown RBP17.07■□□□□ 0.32
CCNL1-212ENST00000470121 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
CCNL1-212ENST00000470121 COL15A1P39059 1388 aa17.06■□□□□ 0.32
CCNL1-212ENST00000470121 NFKBIBQ15653 356 aa17.06■□□□□ 0.32
CCNL1-212ENST00000470121 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
CCNL1-212ENST00000470121 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
CCNL1-212ENST00000470121 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
CCNL1-212ENST00000470121 A1BGP04217 495 aa17.05■□□□□ 0.32
CCNL1-212ENST00000470121 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
CCNL1-212ENST00000470121 ERC2O15083 957 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
CCNL1-212ENST00000470121 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 UNC5CLQ8IV45 518 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 PIGBQ92521 554 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
CCNL1-212ENST00000470121 CHMLP26374 656 aa17.03■□□□□ 0.32
CCNL1-212ENST00000470121 CASP7P55210 303 aa17.03■□□□□ 0.32
CCNL1-212ENST00000470121 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
CCNL1-212ENST00000470121 REC8O95072 547 aa17.03■□□□□ 0.32
CCNL1-212ENST00000470121 TTLL7Q6ZT98 887 aa17.03■□□□□ 0.32
CCNL1-212ENST00000470121 SLKQ9H2G2 1235 aaPredicted RBP17.03■□□□□ 0.32
CCNL1-212ENST00000470121 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
CCNL1-212ENST00000470121 ESYT1Q9BSJ8 1104 aa17.02■□□□□ 0.32
CCNL1-212ENST00000470121 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.32
CCNL1-212ENST00000470121 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
CCNL1-212ENST00000470121 SASH1O94885 1247 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
CCNL1-212ENST00000470121 RTL5Q5HYW3 569 aaPredicted RBP17.01■□□□□ 0.31
CCNL1-212ENST00000470121 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 AFDNP55196 1824 aaKnown RBP17.01■□□□□ 0.31
CCNL1-212ENST00000470121 LRP6O75581 1613 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 CD2BP2O95400 341 aaKnown RBP17.01■□□□□ 0.31
CCNL1-212ENST00000470121 OS9Q13438 667 aaPredicted RBP17.01■□□□□ 0.31
CCNL1-212ENST00000470121 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
CCNL1-212ENST00000470121 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
CCNL1-212ENST00000470121 PHLPP1O60346 1717 aa17■□□□□ 0.31
CCNL1-212ENST00000470121 ITGB4P16144 1822 aa17■□□□□ 0.31
CCNL1-212ENST00000470121 H7C1W4 665 aa17■□□□□ 0.31
CCNL1-212ENST00000470121 RFX5P48382 616 aaPredicted RBP17■□□□□ 0.31
CCNL1-212ENST00000470121 EXOC5O00471 708 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 DDIT3P35638 169 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCNL1-212ENST00000470121 RABEP1Q15276 862 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
CCNL1-212ENST00000470121 WNK3Q9BYP7 1800 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
CCNL1-212ENST00000470121 BCL9O00512 1426 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 A0A087WZG4 1122 aa16.99■□□□□ 0.31
CCNL1-212ENST00000470121 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
CCNL1-212ENST00000470121 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
CCNL1-212ENST00000470121 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
CCNL1-212ENST00000470121 GLRX3O76003 335 aaKnown RBP16.97■□□□□ 0.31
CCNL1-212ENST00000470121 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
CCNL1-212ENST00000470121 SPRYD3Q8NCJ5 442 aa16.97■□□□□ 0.31
CCNL1-212ENST00000470121 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
CCNL1-212ENST00000470121 SPATA31A1Q5TZJ5 1347 aa16.97■□□□□ 0.31
CCNL1-212ENST00000470121 FRAT2O75474 233 aaPredicted RBP16.97■□□□□ 0.31
CCNL1-212ENST00000470121 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
CCNL1-212ENST00000470121 EAF2Q96CJ1 260 aaPredicted RBP16.97■□□□□ 0.31
CCNL1-212ENST00000470121 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
CCNL1-212ENST00000470121 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
CCNL1-212ENST00000470121 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.31
CCNL1-212ENST00000470121 EPB41L2O43491 1005 aaKnown RBP16.96■□□□□ 0.31
CCNL1-212ENST00000470121 FOXO4P98177 505 aa16.96■□□□□ 0.31
CCNL1-212ENST00000470121 CCDC191Q8NCU4 936 aa16.96■□□□□ 0.31
CCNL1-212ENST00000470121 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.31
CCNL1-212ENST00000470121 IL17RAQ96F46 866 aa16.96■□□□□ 0.31
CCNL1-212ENST00000470121 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
CCNL1-212ENST00000470121 ADAMTS2O95450 1211 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 MAP4K4O95819 1239 aaPredicted RBP16.95■□□□□ 0.3
CCNL1-212ENST00000470121 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
CCNL1-212ENST00000470121 AACSQ86V21 672 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 CHMP5Q9NZZ3 219 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 TJP1Q07157 1748 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 IL25Q9H293 177 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
CCNL1-212ENST00000470121 TRIM28Q13263 835 aaKnown RBP16.94■□□□□ 0.3
CCNL1-212ENST00000470121 SIL1Q9H173 461 aa16.94■□□□□ 0.3
CCNL1-212ENST00000470121 TOM1O60784 492 aa16.93■□□□□ 0.3
CCNL1-212ENST00000470121 STARD3NLO95772 234 aa16.93■□□□□ 0.3
CCNL1-212ENST00000470121 TCIRG1Q13488 830 aa16.93■□□□□ 0.3
CCNL1-212ENST00000470121 AK9Q5TCS8 1911 aa16.93■□□□□ 0.3
CCNL1-212ENST00000470121 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
CCNL1-212ENST00000470121 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
CCNL1-212ENST00000470121 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
CCNL1-212ENST00000470121 SLIT2O94813 1529 aa16.92■□□□□ 0.3
CCNL1-212ENST00000470121 SGSM2O43147 1006 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms