RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 NFKBIEO00221 500 aa17.81■□□□□ 0.44
LINC00173-201ENST00000470091 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
LINC00173-201ENST00000470091 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
LINC00173-201ENST00000470091 SBF1O95248 1867 aa17.8■□□□□ 0.44
LINC00173-201ENST00000470091 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
LINC00173-201ENST00000470091 ST5P78524 1137 aa17.79■□□□□ 0.44
LINC00173-201ENST00000470091 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
LINC00173-201ENST00000470091 IFFO2Q5TF58 517 aa17.79■□□□□ 0.44
LINC00173-201ENST00000470091 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
LINC00173-201ENST00000470091 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
LINC00173-201ENST00000470091 GLTPD2A6NH11 291 aa17.78■□□□□ 0.44
LINC00173-201ENST00000470091 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
LINC00173-201ENST00000470091 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
LINC00173-201ENST00000470091 FSTL1Q12841 308 aa17.78■□□□□ 0.44
LINC00173-201ENST00000470091 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
LINC00173-201ENST00000470091 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
LINC00173-201ENST00000470091 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
LINC00173-201ENST00000470091 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
LINC00173-201ENST00000470091 NEFMP07197 916 aa17.77■□□□□ 0.44
LINC00173-201ENST00000470091 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
LINC00173-201ENST00000470091 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
LINC00173-201ENST00000470091 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
LINC00173-201ENST00000470091 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
LINC00173-201ENST00000470091 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
LINC00173-201ENST00000470091 SRGNP10124 158 aa17.75■□□□□ 0.43
LINC00173-201ENST00000470091 ERFEQ4G0M1 354 aa17.75■□□□□ 0.43
LINC00173-201ENST00000470091 STYK1Q6J9G0 422 aa17.75■□□□□ 0.43
LINC00173-201ENST00000470091 CLEC4GQ6UXB4 293 aa17.75■□□□□ 0.43
LINC00173-201ENST00000470091 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00173-201ENST00000470091 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
LINC00173-201ENST00000470091 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
LINC00173-201ENST00000470091 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
LINC00173-201ENST00000470091 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
LINC00173-201ENST00000470091 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
LINC00173-201ENST00000470091 MASTLQ96GX5 879 aa17.74■□□□□ 0.43
LINC00173-201ENST00000470091 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
LINC00173-201ENST00000470091 PCNTO95613 3336 aa17.74■□□□□ 0.43
LINC00173-201ENST00000470091 APAF1O14727 1248 aa17.73■□□□□ 0.43
LINC00173-201ENST00000470091 HLFQ16534 295 aa17.73■□□□□ 0.43
LINC00173-201ENST00000470091 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
LINC00173-201ENST00000470091 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
LINC00173-201ENST00000470091 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
LINC00173-201ENST00000470091 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
LINC00173-201ENST00000470091 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
LINC00173-201ENST00000470091 DLEC1Q9Y238 1755 aa17.71■□□□□ 0.43
LINC00173-201ENST00000470091 SCN7AQ01118 1682 aa17.71■□□□□ 0.43
LINC00173-201ENST00000470091 POTECB2RU33 542 aa17.71■□□□□ 0.43
LINC00173-201ENST00000470091 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
LINC00173-201ENST00000470091 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
LINC00173-201ENST00000470091 NPR1P16066 1061 aa17.7■□□□□ 0.42
LINC00173-201ENST00000470091 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
LINC00173-201ENST00000470091 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
LINC00173-201ENST00000470091 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
LINC00173-201ENST00000470091 MYL6BP14649 208 aa17.69■□□□□ 0.42
LINC00173-201ENST00000470091 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
LINC00173-201ENST00000470091 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
LINC00173-201ENST00000470091 COL11A2P13942 1736 aaPredicted RBP17.68■□□□□ 0.42
LINC00173-201ENST00000470091 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
LINC00173-201ENST00000470091 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
LINC00173-201ENST00000470091 C7orf43Q8WVR3 580 aa17.68■□□□□ 0.42
LINC00173-201ENST00000470091 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
LINC00173-201ENST00000470091 TTLL7Q6ZT98 887 aa17.67■□□□□ 0.42
LINC00173-201ENST00000470091 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
LINC00173-201ENST00000470091 ZNF521Q96K83 1311 aa17.67■□□□□ 0.42
LINC00173-201ENST00000470091 LTBP3Q9NS15 1303 aa17.67■□□□□ 0.42
LINC00173-201ENST00000470091 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
LINC00173-201ENST00000470091 GPTP24298 496 aa17.66■□□□□ 0.42
LINC00173-201ENST00000470091 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
LINC00173-201ENST00000470091 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
LINC00173-201ENST00000470091 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
LINC00173-201ENST00000470091 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
LINC00173-201ENST00000470091 WDR90Q96KV7 1748 aa17.66■□□□□ 0.42
LINC00173-201ENST00000470091 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
LINC00173-201ENST00000470091 ZBTB3Q9H5J0 574 aa17.65■□□□□ 0.42
LINC00173-201ENST00000470091 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
LINC00173-201ENST00000470091 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
LINC00173-201ENST00000470091 FER1L6Q2WGJ9 1857 aa17.64■□□□□ 0.41
LINC00173-201ENST00000470091 ERVV-1B6SEH8 477 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 RGL2O15211 777 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
LINC00173-201ENST00000470091 ALDH1B1P30837 517 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 RIPK4P57078 832 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 JMYQ8N9B5 988 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 TIAM2Q8IVF5 1701 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 CACNA1SQ13698 1873 aa17.63■□□□□ 0.41
LINC00173-201ENST00000470091 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
LINC00173-201ENST00000470091 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
LINC00173-201ENST00000470091 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
LINC00173-201ENST00000470091 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
LINC00173-201ENST00000470091 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
LINC00173-201ENST00000470091 SUSD4Q5VX71 490 aa17.61■□□□□ 0.41
LINC00173-201ENST00000470091 CHADLQ6NUI6 762 aa17.61■□□□□ 0.41
LINC00173-201ENST00000470091 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
LINC00173-201ENST00000470091 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms