RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
NUP98-209ENST00000469881 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
NUP98-209ENST00000469881 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
NUP98-209ENST00000469881 ZNF330Q9Y3S2 320 aaPredicted RBP12.85□□□□□ -0.35
NUP98-209ENST00000469881 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
NUP98-209ENST00000469881 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
NUP98-209ENST00000469881 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
NUP98-209ENST00000469881 STYK1Q6J9G0 422 aa12.84□□□□□ -0.35
NUP98-209ENST00000469881 CNKSR1Q969H4 720 aa12.84□□□□□ -0.35
NUP98-209ENST00000469881 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
NUP98-209ENST00000469881 NPC1L1Q9UHC9 1359 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 NPHP1O15259 732 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 CAMTA2O94983 1202 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 ST5P78524 1137 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 PRPF40BQ6NWY9 871 aaKnown RBP12.83□□□□□ -0.36
NUP98-209ENST00000469881 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 THSD7BQ9C0I4 1608 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 NUP98P52948 1817 aa12.83□□□□□ -0.36
NUP98-209ENST00000469881 CNTNAP1P78357 1384 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 SRGNP10124 158 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
NUP98-209ENST00000469881 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
NUP98-209ENST00000469881 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
NUP98-209ENST00000469881 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
NUP98-209ENST00000469881 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
NUP98-209ENST00000469881 DDNO94850 711 aaPredicted RBP12.81□□□□□ -0.36
NUP98-209ENST00000469881 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
NUP98-209ENST00000469881 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
NUP98-209ENST00000469881 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
NUP98-209ENST00000469881 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
NUP98-209ENST00000469881 MKRN1Q9UHC7 482 aaKnown RBP12.81□□□□□ -0.36
NUP98-209ENST00000469881 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
NUP98-209ENST00000469881 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
NUP98-209ENST00000469881 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
NUP98-209ENST00000469881 PASKQ96RG2 1323 aa12.8□□□□□ -0.36
NUP98-209ENST00000469881 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
NUP98-209ENST00000469881 A1BGP04217 495 aa12.79□□□□□ -0.36
NUP98-209ENST00000469881 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
NUP98-209ENST00000469881 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
NUP98-209ENST00000469881 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
NUP98-209ENST00000469881 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
NUP98-209ENST00000469881 LTBP1Q14766 1721 aa12.77□□□□□ -0.36
NUP98-209ENST00000469881 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 FOXN1O15353 648 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 NPR1P16066 1061 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 C7orf43Q8WVR3 580 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 ZNF541Q9H0D2 1346 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 SNED1Q8TER0 1413 aa12.77□□□□□ -0.37
NUP98-209ENST00000469881 RGL2O15211 777 aa12.76□□□□□ -0.37
NUP98-209ENST00000469881 KCNQ3O43525 872 aa12.76□□□□□ -0.37
NUP98-209ENST00000469881 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
NUP98-209ENST00000469881 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
NUP98-209ENST00000469881 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
NUP98-209ENST00000469881 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
NUP98-209ENST00000469881 ANKRD36CQ5JPF3 1778 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 AIDAQ96BJ3 306 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 HACL1Q9UJ83 578 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
NUP98-209ENST00000469881 RIC1Q4ADV7 1423 aa12.74□□□□□ -0.37
NUP98-209ENST00000469881 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
NUP98-209ENST00000469881 ITGBL1O95965 494 aaPredicted RBP12.74□□□□□ -0.37
NUP98-209ENST00000469881 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
NUP98-209ENST00000469881 CTCFP49711 727 aaPredicted RBP12.74□□□□□ -0.37
NUP98-209ENST00000469881 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
NUP98-209ENST00000469881 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
NUP98-209ENST00000469881 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
NUP98-209ENST00000469881 LAMB2P55268 1798 aa12.74□□□□□ -0.37
NUP98-209ENST00000469881 COL4A5P29400 1685 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 EPHX2P34913 555 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 VEGFBP49765 207 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 EAPPQ56P03 285 aaPredicted RBP12.73□□□□□ -0.37
NUP98-209ENST00000469881 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
NUP98-209ENST00000469881 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
NUP98-209ENST00000469881 ZNF277Q9NRM2 450 aaPredicted RBP12.73□□□□□ -0.37
NUP98-209ENST00000469881 NIP7Q9Y221 180 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP98-209ENST00000469881 FZD9O00144 591 aa12.72□□□□□ -0.37
NUP98-209ENST00000469881 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
NUP98-209ENST00000469881 ABCC12Q96J65 1359 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 IBTKQ9P2D0 1353 aaPredicted RBP12.71□□□□□ -0.37
NUP98-209ENST00000469881 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 ALDH1B1P30837 517 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
NUP98-209ENST00000469881 NBPF10Q6P3W6 841 aaKnown RBP12.71□□□□□ -0.37
NUP98-209ENST00000469881 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 GPC2Q8N158 579 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 NBPF15Q8N660 670 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms