RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 LINS1Q8NG48 757 aa17.83■□□□□ 0.45
CBWD3-205ENST00000469687 IL17RAQ96F46 866 aa17.83■□□□□ 0.45
CBWD3-205ENST00000469687 BICC1Q9H694 974 aaKnown RBP17.83■□□□□ 0.45
CBWD3-205ENST00000469687 RRAGDQ9NQL2 400 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-205ENST00000469687 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
CBWD3-205ENST00000469687 RAD50Q92878 1312 aa17.83■□□□□ 0.44
CBWD3-205ENST00000469687 USP42Q9H9J4 1324 aaKnown RBP17.83■□□□□ 0.44
CBWD3-205ENST00000469687 CUL4AQ13619 759 aa17.83■□□□□ 0.44
CBWD3-205ENST00000469687 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
CBWD3-205ENST00000469687 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
CBWD3-205ENST00000469687 MCM2P49736 904 aa17.82■□□□□ 0.44
CBWD3-205ENST00000469687 LSG1Q9H089 658 aaKnown RBP17.82■□□□□ 0.44
CBWD3-205ENST00000469687 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
CBWD3-205ENST00000469687 TATP17735 454 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-205ENST00000469687 ZNF496Q96IT1 587 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-205ENST00000469687 PRPF40AO75400 957 aaKnown RBP17.81■□□□□ 0.44
CBWD3-205ENST00000469687 GLRX3O76003 335 aaKnown RBP17.81■□□□□ 0.44
CBWD3-205ENST00000469687 RIC3Q7Z5B4 369 aa17.81■□□□□ 0.44
CBWD3-205ENST00000469687 RASEFQ8IZ41 740 aa17.81■□□□□ 0.44
CBWD3-205ENST00000469687 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
CBWD3-205ENST00000469687 TTC41PQ6P2S7 1318 aa17.81■□□□□ 0.44
CBWD3-205ENST00000469687 SASH1O94885 1247 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
CBWD3-205ENST00000469687 KLHDC4Q8TBB5 520 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 XAGE3Q8WTP9 111 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 UTYO14607 1347 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 CYP27B1O15528 508 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 DDX58O95786 925 aaKnown RBP17.8■□□□□ 0.44
CBWD3-205ENST00000469687 CAVIN1Q6NZI2 390 aaKnown RBP17.8■□□□□ 0.44
CBWD3-205ENST00000469687 AACSQ86V21 672 aa17.8■□□□□ 0.44
CBWD3-205ENST00000469687 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
CBWD3-205ENST00000469687 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
CBWD3-205ENST00000469687 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
CBWD3-205ENST00000469687 SIL1Q9H173 461 aa17.79■□□□□ 0.44
CBWD3-205ENST00000469687 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
CBWD3-205ENST00000469687 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
CBWD3-205ENST00000469687 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
CBWD3-205ENST00000469687 JARID2Q92833 1246 aaPredicted RBP17.79■□□□□ 0.44
CBWD3-205ENST00000469687 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
CBWD3-205ENST00000469687 EPHA10Q5JZY3 1008 aa17.78■□□□□ 0.44
CBWD3-205ENST00000469687 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
CBWD3-205ENST00000469687 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
CBWD3-205ENST00000469687 MYD88Q99836 296 aa17.78■□□□□ 0.44
CBWD3-205ENST00000469687 TLR7Q9NYK1 1049 aaKnown RBP17.78■□□□□ 0.44
CBWD3-205ENST00000469687 EPB41L2O43491 1005 aaKnown RBP17.77■□□□□ 0.44
CBWD3-205ENST00000469687 BRD1O95696 1058 aa17.77■□□□□ 0.44
CBWD3-205ENST00000469687 CPA1P15085 419 aa17.77■□□□□ 0.44
CBWD3-205ENST00000469687 PTH1RQ03431 593 aa17.77■□□□□ 0.44
CBWD3-205ENST00000469687 LRP10Q7Z4F1 713 aa17.77■□□□□ 0.44
CBWD3-205ENST00000469687 CCDC8Q9H0W5 538 aaPredicted RBP17.77■□□□□ 0.44
CBWD3-205ENST00000469687 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.44
CBWD3-205ENST00000469687 TCHHQ07283 1943 aa17.77■□□□□ 0.44
CBWD3-205ENST00000469687 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
CBWD3-205ENST00000469687 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.43
CBWD3-205ENST00000469687 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.43
CBWD3-205ENST00000469687 DIAPH3Q9NSV4 1193 aa17.77■□□□□ 0.43
CBWD3-205ENST00000469687 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.43
CBWD3-205ENST00000469687 LARP1Q6PKG0 1096 aaKnown RBP17.76■□□□□ 0.43
CBWD3-205ENST00000469687 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
CBWD3-205ENST00000469687 ZSCAN23Q3MJ62 389 aa17.76■□□□□ 0.43
CBWD3-205ENST00000469687 TTC14Q96N46 770 aa17.76■□□□□ 0.43
CBWD3-205ENST00000469687 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
CBWD3-205ENST00000469687 G3BP1Q13283 466 aaKnown RBP eCLIP17.75■□□□□ 0.43
CBWD3-205ENST00000469687 GCKRQ14397 625 aa17.75■□□□□ 0.43
CBWD3-205ENST00000469687 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-205ENST00000469687 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-205ENST00000469687 KIAA1211Q6ZU35 1233 aa17.75■□□□□ 0.43
CBWD3-205ENST00000469687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.75■□□□□ 0.43
CBWD3-205ENST00000469687 MRC1P22897 1456 aa17.75■□□□□ 0.43
CBWD3-205ENST00000469687 METTL22Q9BUU2 404 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-205ENST00000469687 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 DCCP43146 1447 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 AK2P54819 239 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 NEXNQ0ZGT2 675 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 TTC5Q8N0Z6 440 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 GPATCH3Q96I76 525 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
CBWD3-205ENST00000469687 SNRPA1P09661 255 aaKnown RBP17.73■□□□□ 0.43
CBWD3-205ENST00000469687 ANKRD13DQ6ZTN6 518 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 FAM227BQ96M60 508 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 SPATA31A3Q5VYP0 1347 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 DTNBO60941 627 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 HSPA2P54652 639 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 EVI5LQ96CN4 794 aa17.73■□□□□ 0.43
CBWD3-205ENST00000469687 GLI3P10071 1580 aa17.72■□□□□ 0.43
CBWD3-205ENST00000469687 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
CBWD3-205ENST00000469687 ZNF445P59923 1031 aa17.72■□□□□ 0.43
CBWD3-205ENST00000469687 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
CBWD3-205ENST00000469687 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
CBWD3-205ENST00000469687 BOLA2Q9H3K6 86 aa17.72■□□□□ 0.43
CBWD3-205ENST00000469687 TMEM63CQ9P1W3 806 aa17.72■□□□□ 0.43
CBWD3-205ENST00000469687 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
CBWD3-205ENST00000469687 PTCD1O75127 700 aaKnown RBP17.72■□□□□ 0.43
CBWD3-205ENST00000469687 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
CBWD3-205ENST00000469687 XIRP1Q702N8 1843 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms