RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 UPF2Q9HAU5 1272 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 TTC5Q8N0Z6 440 aa12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
SEMA4D-215ENST00000469653 UBR2Q8IWV8 1755 aa12.36□□□□□ -0.43
SEMA4D-215ENST00000469653 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
SEMA4D-215ENST00000469653 APBB1O00213 710 aa12.35□□□□□ -0.43
SEMA4D-215ENST00000469653 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-215ENST00000469653 APBA3O96018 575 aa12.35□□□□□ -0.43
SEMA4D-215ENST00000469653 ADRA2BP18089 450 aa12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 PALLDQ8WX93 1383 aa12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 CLCN1P35523 988 aa12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 MPNDQ8N594 471 aa12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 FAM193AP78312 1265 aa12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 ZNF496Q96IT1 587 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-215ENST00000469653 TRAK2O60296 914 aa12.33□□□□□ -0.43
SEMA4D-215ENST00000469653 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.43
SEMA4D-215ENST00000469653 LY75O60449 1722 aa12.33□□□□□ -0.44
SEMA4D-215ENST00000469653 SF3B2Q13435 895 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-215ENST00000469653 KRT24Q2M2I5 525 aa12.33□□□□□ -0.44
SEMA4D-215ENST00000469653 FMNL2Q96PY5 1086 aa12.33□□□□□ -0.44
SEMA4D-215ENST00000469653 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
SEMA4D-215ENST00000469653 RWDD1Q9H446 243 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-215ENST00000469653 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
SEMA4D-215ENST00000469653 C5P01031 1676 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 SIK1P57059 783 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 FOXD4L6Q3SYB3 417 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 FOXD4L3Q6VB84 417 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 PLSCR1O15162 318 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 KCNQ4P56696 695 aa12.31□□□□□ -0.44
SEMA4D-215ENST00000469653 PRAMEF22A3QJZ6 481 aa12.3□□□□□ -0.44
SEMA4D-215ENST00000469653 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
SEMA4D-215ENST00000469653 GIGYF1O75420 1035 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-215ENST00000469653 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
SEMA4D-215ENST00000469653 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEMA4D-215ENST00000469653 ERBB4Q15303 1308 aa12.3□□□□□ -0.44
SEMA4D-215ENST00000469653 RGPD3A6NKT7 1758 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 RGPD4Q7Z3J3 1758 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 SNRPA1P09661 255 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 MVPQ14764 893 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 TJP1Q07157 1748 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 BAG6P46379 1132 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 MRE11P49959 708 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 TAF1LQ8IZX4 1826 aa12.29□□□□□ -0.44
SEMA4D-215ENST00000469653 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 PROM2Q8N271 834 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 ITPK1Q13572 414 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
SEMA4D-215ENST00000469653 DDIT3P35638 169 aa12.27□□□□□ -0.44
SEMA4D-215ENST00000469653 CAMKK2Q96RR4 588 aa12.27□□□□□ -0.44
SEMA4D-215ENST00000469653 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.44
SEMA4D-215ENST00000469653 COL5A3P25940 1745 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-215ENST00000469653 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.45
SEMA4D-215ENST00000469653 SLC27A3Q5K4L6 730 aa12.27□□□□□ -0.45
SEMA4D-215ENST00000469653 CICQ96RK0 1608 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-215ENST00000469653 TEX13AQ9BXU3 409 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-215ENST00000469653 VAMP4O75379 141 aa12.26□□□□□ -0.45
SEMA4D-215ENST00000469653 GTF2E1P29083 439 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-215ENST00000469653 HOXB7P09629 217 aa12.26□□□□□ -0.45
SEMA4D-215ENST00000469653 ANAPC15P60006 121 aa12.26□□□□□ -0.45
SEMA4D-215ENST00000469653 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
SEMA4D-215ENST00000469653 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
SEMA4D-215ENST00000469653 STARD3NLO95772 234 aa12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 DZIP1LQ8IYY4 767 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 MYH14Q7Z406 1995 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 ESPNB1AK53 854 aa12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 ITPRIPQ8IWB1 547 aa12.25□□□□□ -0.45
SEMA4D-215ENST00000469653 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-215ENST00000469653 RREB1Q92766 1687 aa12.24□□□□□ -0.45
SEMA4D-215ENST00000469653 NOL8Q76FK4 1167 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-215ENST00000469653 C4BP0C0L5 1744 aa12.24□□□□□ -0.45
SEMA4D-215ENST00000469653 A1BGP04217 495 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms