RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 RAB11FIP3O75154 756 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 UBE3BQ7Z3V4 1068 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 RAB11FIP4Q86YS3 637 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 PLCD4Q9BRC7 762 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
CD46-212ENST00000469535 EPB41L2O43491 1005 aaKnown RBP8.19□□□□□ -1.1
CD46-212ENST00000469535 MX1P20591 662 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 TAF3Q5VWG9 929 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 CACNA2D4Q7Z3S7 1137 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 TNRQ92752 1358 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 GLRX3O76003 335 aaKnown RBP8.19□□□□□ -1.1
CD46-212ENST00000469535 NPHP3Q7Z494 1330 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 FAM135AQ9P2D6 1515 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 CRNKL1Q9BZJ0 848 aaKnown RBP8.19□□□□□ -1.1
CD46-212ENST00000469535 TSPY3P0CV98 308 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 TSPY8P0CW00 308 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 RFX1P22670 979 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 HAND2P61296 217 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 STX8Q9UNK0 236 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 ACEP12821 1306 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 ANXA1P04083 346 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 DNA2P51530 1060 aa8.19□□□□□ -1.1
CD46-212ENST00000469535 SMARCC1Q92922 1105 aaPredicted RBP8.19□□□□□ -1.1
CD46-212ENST00000469535 SUPT6HQ7KZ85 1726 aaKnown RBP8.19□□□□□ -1.1
CD46-212ENST00000469535 KIF20AO95235 890 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 TTF1Q15361 905 aaPredicted RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 FERMT3Q86UX7 667 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 RPAP2Q8IXW5 612 aaPredicted RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 PABPN1LA6NDY0 278 aaKnown RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 SNRPA1P09661 255 aaKnown RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 CTNNA2P26232 953 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 TCERG1LQ5VWI1 586 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 FKBP15Q5T1M5 1219 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 UPF3BQ9BZI7 483 aaKnown RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 CAMK4Q16566 473 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.18□□□□□ -1.1
CD46-212ENST00000469535 ZNF804AQ7Z570 1209 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 SLC39A6Q13433 755 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 TMEM67Q5HYA8 995 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 SIRT1Q96EB6 747 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 C8orf76Q96K31 380 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.18□□□□□ -1.1
CD46-212ENST00000469535 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 SYNJ1O43426 1573 aa8.18□□□□□ -1.1
CD46-212ENST00000469535 K7ELQ4 463 aaPredicted RBP8.17□□□□□ -1.1
CD46-212ENST00000469535 KIF14Q15058 1648 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 TRAK2O60296 914 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 KIF5BP33176 963 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
CD46-212ENST00000469535 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
CD46-212ENST00000469535 JAG2Q9Y219 1238 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 MRPS9P82933 396 aaKnown RBP8.17□□□□□ -1.1
CD46-212ENST00000469535 CALML4Q96GE6 196 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 EFCAB5A4FU69 1503 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 IDEP14735 1019 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 TAF12Q16514 161 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 MFSD6Q6ZSS7 791 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 UTP14AQ9BVJ6 771 aaKnown RBP8.17□□□□□ -1.1
CD46-212ENST00000469535 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 CYP7A1P22680 504 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 NYXQ9GZU5 481 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 NUP62CLQ9H1M0 184 aa8.17□□□□□ -1.1
CD46-212ENST00000469535 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
CD46-212ENST00000469535 PRC1O43663 620 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 HMGN5P82970 282 aaKnown RBP8.16□□□□□ -1.1
CD46-212ENST00000469535 GPR162Q16538 588 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 CFAP100Q494V2 611 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 LRSAM1Q6UWE0 723 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 ADGRF5Q8IZF2 1346 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 GNPATO15228 680 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 CCDC178Q5BJE1 867 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 FAM43AQ8N2R8 423 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 LARP6Q9BRS8 491 aaKnown RBP8.16□□□□□ -1.1
CD46-212ENST00000469535 PRKG1Q13976 671 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 EAPPQ56P03 285 aaPredicted RBP8.16□□□□□ -1.1
CD46-212ENST00000469535 DPH6Q7L8W6 267 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
CD46-212ENST00000469535 PHAXQ9H814 394 aaKnown RBP8.16□□□□□ -1.1
CD46-212ENST00000469535 SPA17Q15506 151 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 FAM212AQ96EL1 285 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 CCDC113Q9H0I3 377 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 SP4Q02446 784 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 MICU3Q86XE3 530 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
CD46-212ENST00000469535 WDR7Q9Y4E6 1490 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 TDRD12Q587J7 1177 aaKnown RBP8.15□□□□□ -1.1
CD46-212ENST00000469535 VPS36Q86VN1 386 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 ZGPATQ8N5A5 531 aaKnown RBP8.15□□□□□ -1.1
CD46-212ENST00000469535 GSTTP1A0A1W2PQM5 241 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 IL2RBP14784 551 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 SYNCQ9H7C4 482 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 NOD1Q9Y239 953 aa8.15□□□□□ -1.1
CD46-212ENST00000469535 NOS1P29475 1434 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms