RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
HDAC6-217ENST00000469223 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
HDAC6-217ENST00000469223 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
HDAC6-217ENST00000469223 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
HDAC6-217ENST00000469223 MRC1P22897 1456 aa17.53■□□□□ 0.4
HDAC6-217ENST00000469223 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
HDAC6-217ENST00000469223 TBC1D9BQ66K14 1250 aa17.52■□□□□ 0.4
HDAC6-217ENST00000469223 CNKSR1Q969H4 720 aa17.52■□□□□ 0.4
HDAC6-217ENST00000469223 POLKQ9UBT6 870 aa17.52■□□□□ 0.4
HDAC6-217ENST00000469223 CA12O43570 354 aa17.51■□□□□ 0.39
HDAC6-217ENST00000469223 CARD14Q9BXL6 1004 aa17.51■□□□□ 0.39
HDAC6-217ENST00000469223 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-217ENST00000469223 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
HDAC6-217ENST00000469223 STYK1Q6J9G0 422 aa17.5■□□□□ 0.39
HDAC6-217ENST00000469223 MAP2K2P36507 400 aa17.49■□□□□ 0.39
HDAC6-217ENST00000469223 TRIM26Q12899 539 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-217ENST00000469223 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
HDAC6-217ENST00000469223 TLL2Q9Y6L7 1015 aa17.49■□□□□ 0.39
HDAC6-217ENST00000469223 TRAF5O00463 557 aa17.48■□□□□ 0.39
HDAC6-217ENST00000469223 SRGNP10124 158 aa17.48■□□□□ 0.39
HDAC6-217ENST00000469223 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
HDAC6-217ENST00000469223 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDAC6-217ENST00000469223 CNBD1Q8NA66 436 aa17.48■□□□□ 0.39
HDAC6-217ENST00000469223 COL4A5P29400 1685 aa17.48■□□□□ 0.39
HDAC6-217ENST00000469223 NPHP1O15259 732 aa17.47■□□□□ 0.39
HDAC6-217ENST00000469223 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
HDAC6-217ENST00000469223 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
HDAC6-217ENST00000469223 CST9Q5W186 159 aa17.47■□□□□ 0.39
HDAC6-217ENST00000469223 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
HDAC6-217ENST00000469223 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
HDAC6-217ENST00000469223 BRPF1P55201 1214 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-217ENST00000469223 OLFM4Q6UX06 510 aa17.46■□□□□ 0.39
HDAC6-217ENST00000469223 GPC2Q8N158 579 aa17.46■□□□□ 0.39
HDAC6-217ENST00000469223 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-217ENST00000469223 C7orf43Q8WVR3 580 aa17.45■□□□□ 0.38
HDAC6-217ENST00000469223 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
HDAC6-217ENST00000469223 FZD9O00144 591 aa17.44■□□□□ 0.38
HDAC6-217ENST00000469223 ST5P78524 1137 aa17.44■□□□□ 0.38
HDAC6-217ENST00000469223 CIAPIN1Q6FI81 312 aa17.44■□□□□ 0.38
HDAC6-217ENST00000469223 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
HDAC6-217ENST00000469223 LMOD1P29536 600 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-217ENST00000469223 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
HDAC6-217ENST00000469223 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
HDAC6-217ENST00000469223 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
HDAC6-217ENST00000469223 A0A087WZG4 1122 aa17.42■□□□□ 0.38
HDAC6-217ENST00000469223 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-217ENST00000469223 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
HDAC6-217ENST00000469223 CUL9Q8IWT3 2517 aa17.41■□□□□ 0.38
HDAC6-217ENST00000469223 SCNN1DP51172 638 aa17.4■□□□□ 0.38
HDAC6-217ENST00000469223 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
HDAC6-217ENST00000469223 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
HDAC6-217ENST00000469223 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
HDAC6-217ENST00000469223 EPS15P42566 896 aa17.39■□□□□ 0.37
HDAC6-217ENST00000469223 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
HDAC6-217ENST00000469223 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
HDAC6-217ENST00000469223 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
HDAC6-217ENST00000469223 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-217ENST00000469223 NPR1P16066 1061 aa17.38■□□□□ 0.37
HDAC6-217ENST00000469223 RTKN2Q8IZC4 609 aa17.38■□□□□ 0.37
HDAC6-217ENST00000469223 MKI67P46013 3256 aaKnown RBP17.37■□□□□ 0.37
HDAC6-217ENST00000469223 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
HDAC6-217ENST00000469223 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
HDAC6-217ENST00000469223 SYNE4Q8N205 404 aa17.37■□□□□ 0.37
HDAC6-217ENST00000469223 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
HDAC6-217ENST00000469223 ZIC5Q96T25 663 aa17.37■□□□□ 0.37
HDAC6-217ENST00000469223 STARD3NLO95772 234 aa17.36■□□□□ 0.37
HDAC6-217ENST00000469223 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
HDAC6-217ENST00000469223 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
HDAC6-217ENST00000469223 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-217ENST00000469223 HHIPL1Q96JK4 782 aa17.36■□□□□ 0.37
HDAC6-217ENST00000469223 ZNF408Q9H9D4 720 aa17.36■□□□□ 0.37
HDAC6-217ENST00000469223 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
HDAC6-217ENST00000469223 CEP290O15078 2479 aa17.34■□□□□ 0.37
HDAC6-217ENST00000469223 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
HDAC6-217ENST00000469223 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-217ENST00000469223 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
HDAC6-217ENST00000469223 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-217ENST00000469223 NOGQ13253 232 aa17.33■□□□□ 0.36
HDAC6-217ENST00000469223 PCGF6Q9BYE7 350 aa17.33■□□□□ 0.36
HDAC6-217ENST00000469223 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
HDAC6-217ENST00000469223 PSMD1Q99460 953 aa17.32■□□□□ 0.36
HDAC6-217ENST00000469223 IL6STP40189 918 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-217ENST00000469223 HABP4Q5JVS0 413 aaKnown RBP17.31■□□□□ 0.36
HDAC6-217ENST00000469223 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
HDAC6-217ENST00000469223 SZT2Q5T011 3432 aa17.31■□□□□ 0.36
HDAC6-217ENST00000469223 HEG1Q9ULI3 1381 aa17.3■□□□□ 0.36
HDAC6-217ENST00000469223 ADARB2Q9NS39 739 aaKnown RBP17.3■□□□□ 0.36
HDAC6-217ENST00000469223 SAGE1Q9NXZ1 904 aa17.3■□□□□ 0.36
HDAC6-217ENST00000469223 TRIOBPQ9H2D6 2365 aa17.3■□□□□ 0.36
HDAC6-217ENST00000469223 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
HDAC6-217ENST00000469223 HTTP42858 3142 aa17.29■□□□□ 0.36
HDAC6-217ENST00000469223 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-217ENST00000469223 CTU1Q7Z7A3 348 aaKnown RBP17.29■□□□□ 0.36
HDAC6-217ENST00000469223 NPM2Q86SE8 214 aaKnown RBP17.29■□□□□ 0.36
HDAC6-217ENST00000469223 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
HDAC6-217ENST00000469223 HUNKP57058 714 aa17.28■□□□□ 0.36
HDAC6-217ENST00000469223 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
HDAC6-217ENST00000469223 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-217ENST00000469223 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
HDAC6-217ENST00000469223 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms