RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 MASTLQ96GX5 879 aa26.3■■□□□ 1.8
UPK3B-204ENST00000469114 BCORQ6W2J9 1755 aa26.3■■□□□ 1.8
UPK3B-204ENST00000469114 IQCA1LA6NCM1 817 aa26.29■■□□□ 1.8
UPK3B-204ENST00000469114 A1BGP04217 495 aa26.29■■□□□ 1.8
UPK3B-204ENST00000469114 CC2D1BQ5T0F9 858 aaKnown RBP26.29■■□□□ 1.8
UPK3B-204ENST00000469114 KIF7Q2M1P5 1343 aa26.29■■□□□ 1.8
UPK3B-204ENST00000469114 U2SURPO15042 1029 aaKnown RBP26.28■■□□□ 1.8
UPK3B-204ENST00000469114 POTEIP0CG38 1075 aa26.28■■□□□ 1.8
UPK3B-204ENST00000469114 POTEJP0CG39 1038 aa26.28■■□□□ 1.8
UPK3B-204ENST00000469114 DZIP3Q86Y13 1208 aaKnown RBP26.27■■□□□ 1.8
UPK3B-204ENST00000469114 COL3A1P02461 1466 aaPredicted RBP26.27■■□□□ 1.8
UPK3B-204ENST00000469114 SCN4AP35499 1836 aa26.27■■□□□ 1.8
UPK3B-204ENST00000469114 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
UPK3B-204ENST00000469114 LDHDQ86WU2 507 aa26.26■■□□□ 1.79
UPK3B-204ENST00000469114 CNTNAP1P78357 1384 aa26.25■■□□□ 1.79
UPK3B-204ENST00000469114 CEMIPQ8WUJ3 1361 aa26.24■■□□□ 1.79
UPK3B-204ENST00000469114 CCDC93Q567U6 631 aa26.24■■□□□ 1.79
UPK3B-204ENST00000469114 L3MBTL3Q96JM7 780 aaPredicted RBP26.24■■□□□ 1.79
UPK3B-204ENST00000469114 BTBD11A6QL63 1104 aa26.23■■□□□ 1.79
UPK3B-204ENST00000469114 NBPF5PQ86XG9 351 aaPredicted RBP26.23■■□□□ 1.79
UPK3B-204ENST00000469114 TAF1DQ9H5J8 278 aaPredicted RBP26.23■■□□□ 1.79
UPK3B-204ENST00000469114 PASKQ96RG2 1323 aa26.22■■□□□ 1.79
UPK3B-204ENST00000469114 CLEC4GQ6UXB4 293 aa26.22■■□□□ 1.79
UPK3B-204ENST00000469114 ZNF652Q9Y2D9 606 aa26.22■■□□□ 1.79
UPK3B-204ENST00000469114 C7orf43Q8WVR3 580 aa26.21■■□□□ 1.79
UPK3B-204ENST00000469114 FOXN1O15353 648 aa26.2■■□□□ 1.78
UPK3B-204ENST00000469114 KCNQ3O43525 872 aa26.2■■□□□ 1.78
UPK3B-204ENST00000469114 NPR1P16066 1061 aa26.2■■□□□ 1.78
UPK3B-204ENST00000469114 FKBP4Q02790 459 aaKnown RBP eCLIP26.19■■□□□ 1.78
UPK3B-204ENST00000469114 AIDAQ96BJ3 306 aa26.19■■□□□ 1.78
UPK3B-204ENST00000469114 PRDM10Q9NQV6 1147 aa26.19■■□□□ 1.78
UPK3B-204ENST00000469114 USP16Q9Y5T5 823 aa26.19■■□□□ 1.78
UPK3B-204ENST00000469114 NPC1L1Q9UHC9 1359 aa26.19■■□□□ 1.78
UPK3B-204ENST00000469114 TMEM88BA6NKF7 163 aa26.18■■□□□ 1.78
UPK3B-204ENST00000469114 PIP4K2AP48426 406 aaPredicted RBP26.17■■□□□ 1.78
UPK3B-204ENST00000469114 EAPPQ56P03 285 aaPredicted RBP26.17■■□□□ 1.78
UPK3B-204ENST00000469114 CTCFP49711 727 aaPredicted RBP26.16■■□□□ 1.78
UPK3B-204ENST00000469114 TPTE2Q6XPS3 522 aa26.16■■□□□ 1.78
UPK3B-204ENST00000469114 ZNF277Q9NRM2 450 aaPredicted RBP26.16■■□□□ 1.78
UPK3B-204ENST00000469114 HACL1Q9UJ83 578 aa26.16■■□□□ 1.78
UPK3B-204ENST00000469114 ZNF541Q9H0D2 1346 aa26.15■■□□□ 1.78
UPK3B-204ENST00000469114 KLRG2A4D1S0 409 aaPredicted RBP26.15■■□□□ 1.78
UPK3B-204ENST00000469114 ITGBL1O95965 494 aaPredicted RBP26.15■■□□□ 1.78
UPK3B-204ENST00000469114 PRKAR2BP31323 418 aa26.15■■□□□ 1.78
UPK3B-204ENST00000469114 VEGFBP49765 207 aa26.15■■□□□ 1.78
UPK3B-204ENST00000469114 CNGB1Q14028 1251 aaPredicted RBP26.15■■□□□ 1.78
UPK3B-204ENST00000469114 RTKN2Q8IZC4 609 aa26.15■■□□□ 1.78
UPK3B-204ENST00000469114 CLEC11AQ9Y240 323 aa26.15■■□□□ 1.78
UPK3B-204ENST00000469114 RGL2O15211 777 aa26.14■■□□□ 1.78
UPK3B-204ENST00000469114 SNRPA1P09661 255 aaKnown RBP26.14■■□□□ 1.78
UPK3B-204ENST00000469114 PHACTR3Q96KR7 559 aa26.14■■□□□ 1.78
UPK3B-204ENST00000469114 EPHX2P34913 555 aa26.13■■□□□ 1.77
UPK3B-204ENST00000469114 NIP7Q9Y221 180 aaKnown RBP eCLIP26.13■■□□□ 1.77
UPK3B-204ENST00000469114 ADAMTSL1Q8N6G6 1762 aa26.12■■□□□ 1.77
UPK3B-204ENST00000469114 PRAMEF22A3QJZ6 481 aa26.12■■□□□ 1.77
UPK3B-204ENST00000469114 PNMA8AQ86V59 439 aaPredicted RBP26.12■■□□□ 1.77
UPK3B-204ENST00000469114 RSPH6AQ9H0K4 717 aa26.12■■□□□ 1.77
UPK3B-204ENST00000469114 ALDH1B1P30837 517 aa26.11■■□□□ 1.77
UPK3B-204ENST00000469114 RTF1Q92541 710 aaKnown RBP26.11■■□□□ 1.77
UPK3B-204ENST00000469114 CFAP53Q96M91 514 aa26.11■■□□□ 1.77
UPK3B-204ENST00000469114 IARSP41252 1262 aaKnown RBP26.1■■□□□ 1.77
UPK3B-204ENST00000469114 OLFM4Q6UX06 510 aa26.09■■□□□ 1.77
UPK3B-204ENST00000469114 WBP1LQ9NX94 342 aa26.09■■□□□ 1.77
UPK3B-204ENST00000469114 RNF123Q5XPI4 1314 aa26.09■■□□□ 1.77
UPK3B-204ENST00000469114 FAM177BA6PVY3 158 aa26.08■■□□□ 1.77
UPK3B-204ENST00000469114 FZD9O00144 591 aa26.08■■□□□ 1.77
UPK3B-204ENST00000469114 GTF2E1P29083 439 aaPredicted RBP26.08■■□□□ 1.77
UPK3B-204ENST00000469114 SYNE4Q8N205 404 aa26.08■■□□□ 1.77
UPK3B-204ENST00000469114 NUDCQ9Y266 331 aa26.08■■□□□ 1.77
UPK3B-204ENST00000469114 NBPF26B4DH59 902 aa26.07■■□□□ 1.76
UPK3B-204ENST00000469114 NBPF10Q6P3W6 841 aaKnown RBP26.07■■□□□ 1.76
UPK3B-204ENST00000469114 CNTROBQ8N137 903 aa26.07■■□□□ 1.76
UPK3B-204ENST00000469114 GPC2Q8N158 579 aa26.07■■□□□ 1.76
UPK3B-204ENST00000469114 NBPF15Q8N660 670 aa26.07■■□□□ 1.76
UPK3B-204ENST00000469114 RASSF10A6NK89 507 aa26.06■■□□□ 1.76
UPK3B-204ENST00000469114 DEFB115Q30KQ5 88 aa26.06■■□□□ 1.76
UPK3B-204ENST00000469114 MCM10Q7L590 875 aa26.06■■□□□ 1.76
UPK3B-204ENST00000469114 JDP2Q8WYK2 163 aa26.06■■□□□ 1.76
UPK3B-204ENST00000469114 LBX1P52954 281 aa26.05■■□□□ 1.76
UPK3B-204ENST00000469114 MAP1SQ66K74 1059 aaPredicted RBP26.05■■□□□ 1.76
UPK3B-204ENST00000469114 PSMD1Q99460 953 aa26.05■■□□□ 1.76
UPK3B-204ENST00000469114 HLFQ16534 295 aa26.03■■□□□ 1.76
UPK3B-204ENST00000469114 LAMB4A4D0S4 1761 aa26.02■■□□□ 1.76
UPK3B-204ENST00000469114 U2AF1L5P0DN76 240 aaPredicted RBP26.02■■□□□ 1.76
UPK3B-204ENST00000469114 EIF6P56537 245 aaKnown RBP26.02■■□□□ 1.76
UPK3B-204ENST00000469114 U2AF1Q01081 240 aaKnown RBP eCLIP26.02■■□□□ 1.76
UPK3B-204ENST00000469114 MAP2K1Q02750 393 aaPredicted RBP26.02■■□□□ 1.76
UPK3B-204ENST00000469114 CC2D2BQ6DHV5 1058 aa26.02■■□□□ 1.76
UPK3B-204ENST00000469114 NYXQ9GZU5 481 aa26.02■■□□□ 1.76
UPK3B-204ENST00000469114 ABT1Q9ULW3 272 aaKnown RBP26.02■■□□□ 1.76
UPK3B-204ENST00000469114 HTATSF1O43719 755 aaKnown RBP26.01■■□□□ 1.75
UPK3B-204ENST00000469114 CRY2Q49AN0 593 aa26.01■■□□□ 1.75
UPK3B-204ENST00000469114 SNED1Q8TER0 1413 aa26.01■■□□□ 1.75
UPK3B-204ENST00000469114 WDR33Q9C0J8 1336 aaKnown RBP26.01■■□□□ 1.75
UPK3B-204ENST00000469114 HSPA8P11142 646 aaKnown RBP26■■□□□ 1.75
UPK3B-204ENST00000469114 LMOD1P29536 600 aaPredicted RBP26■■□□□ 1.75
UPK3B-204ENST00000469114 DCTN1Q14203 1278 aa26■■□□□ 1.75
UPK3B-204ENST00000469114 ABCC12Q96J65 1359 aa25.99■■□□□ 1.75
UPK3B-204ENST00000469114 GJA3Q9Y6H8 435 aa25.99■■□□□ 1.75
UPK3B-204ENST00000469114 TAF7Q15545 349 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms