RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ZNF330Q9Y3S2 320 aaPredicted RBP25.71■■□□□ 1.71
TMEM53-207ENST00000468117 PDE4AP27815 886 aa25.7■■□□□ 1.7
TMEM53-207ENST00000468117 CHD1LQ86WJ1 897 aa25.7■■□□□ 1.7
TMEM53-207ENST00000468117 PNMA6EA0A0J9YXQ4 647 aa25.7■■□□□ 1.7
TMEM53-207ENST00000468117 NEURL1BA8MQ27 555 aa25.7■■□□□ 1.7
TMEM53-207ENST00000468117 ONECUT3O60422 494 aaPredicted RBP25.7■■□□□ 1.7
TMEM53-207ENST00000468117 ATP8B2P98198 1209 aa25.69■■□□□ 1.7
TMEM53-207ENST00000468117 PALLDQ8WX93 1383 aa25.68■■□□□ 1.7
TMEM53-207ENST00000468117 GRM8O00222 908 aa25.68■■□□□ 1.7
TMEM53-207ENST00000468117 SEPT12Q8IYM1 358 aa25.68■■□□□ 1.7
TMEM53-207ENST00000468117 LOC102724428A0A0B4J2F2 783 aa25.67■■□□□ 1.7
TMEM53-207ENST00000468117 SIK1P57059 783 aa25.67■■□□□ 1.7
TMEM53-207ENST00000468117 PTF1AQ7RTS3 328 aa25.67■■□□□ 1.7
TMEM53-207ENST00000468117 ZBTB3Q9H5J0 574 aa25.67■■□□□ 1.7
TMEM53-207ENST00000468117 RBM19Q9Y4C8 960 aaKnown RBP25.67■■□□□ 1.7
TMEM53-207ENST00000468117 ATP5J2-PTCD1G3V325 749 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 ATP6V1AP38606 617 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 EP400Q96L91 3159 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 BTAF1O14981 1849 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 SBF2Q86WG5 1849 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 GCKRQ14397 625 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 ZBTB1Q9Y2K1 713 aa25.66■■□□□ 1.7
TMEM53-207ENST00000468117 SMARCC1Q92922 1105 aaPredicted RBP25.65■■□□□ 1.7
TMEM53-207ENST00000468117 NHSQ6T4R5 1651 aa25.65■■□□□ 1.7
TMEM53-207ENST00000468117 UTYO14607 1347 aa25.65■■□□□ 1.7
TMEM53-207ENST00000468117 PPP1R42Q7Z4L9 355 aa25.64■■□□□ 1.69
TMEM53-207ENST00000468117 CICQ96RK0 1608 aaPredicted RBP25.63■■□□□ 1.69
TMEM53-207ENST00000468117 APBB1O00213 710 aa25.63■■□□□ 1.69
TMEM53-207ENST00000468117 MYH14Q7Z406 1995 aaKnown RBP25.63■■□□□ 1.69
TMEM53-207ENST00000468117 IBTKQ9P2D0 1353 aaPredicted RBP25.63■■□□□ 1.69
TMEM53-207ENST00000468117 ITPK1Q13572 414 aa25.63■■□□□ 1.69
TMEM53-207ENST00000468117 BACH2Q9BYV9 841 aa25.63■■□□□ 1.69
TMEM53-207ENST00000468117 ARXQ96QS3 562 aa25.62■■□□□ 1.69
TMEM53-207ENST00000468117 BRWD3Q6RI45 1802 aa25.62■■□□□ 1.69
TMEM53-207ENST00000468117 SSH3Q8TE77 659 aa25.61■■□□□ 1.69
TMEM53-207ENST00000468117 SUCLG2Q96I99 432 aa25.61■■□□□ 1.69
TMEM53-207ENST00000468117 BCL11AQ9H165 835 aa25.61■■□□□ 1.69
TMEM53-207ENST00000468117 EXOC6BQ9Y2D4 811 aa25.61■■□□□ 1.69
TMEM53-207ENST00000468117 SRGAP3O43295 1099 aa25.61■■□□□ 1.69
TMEM53-207ENST00000468117 KIF6Q6ZMV9 814 aa25.6■■□□□ 1.69
TMEM53-207ENST00000468117 KAZALD1Q96I82 304 aa25.6■■□□□ 1.69
TMEM53-207ENST00000468117 HDAC5Q9UQL6 1122 aa25.6■■□□□ 1.69
TMEM53-207ENST00000468117 COL5A3P25940 1745 aaPredicted RBP25.6■■□□□ 1.69
TMEM53-207ENST00000468117 JARID2Q92833 1246 aaPredicted RBP25.59■■□□□ 1.69
TMEM53-207ENST00000468117 ZNF831Q5JPB2 1677 aa25.59■■□□□ 1.69
TMEM53-207ENST00000468117 POLA2Q14181 598 aa25.59■■□□□ 1.69
TMEM53-207ENST00000468117 FAM161AQ3B820 660 aa25.59■■□□□ 1.69
TMEM53-207ENST00000468117 SMARCA5O60264 1052 aaPredicted RBP25.58■■□□□ 1.69
TMEM53-207ENST00000468117 IL6STP40189 918 aaPredicted RBP25.58■■□□□ 1.69
TMEM53-207ENST00000468117 CRKLP46109 303 aaKnown RBP25.58■■□□□ 1.69
TMEM53-207ENST00000468117 C8orf34Q49A92 452 aa25.58■■□□□ 1.69
TMEM53-207ENST00000468117 INTS5Q6P9B9 1019 aaKnown RBP25.58■■□□□ 1.69
TMEM53-207ENST00000468117 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.69
TMEM53-207ENST00000468117 RREB1Q92766 1687 aa25.58■■□□□ 1.69
TMEM53-207ENST00000468117 A0A087WZG4 1122 aa25.58■■□□□ 1.68
TMEM53-207ENST00000468117 BICC1Q9H694 974 aaKnown RBP25.58■■□□□ 1.68
TMEM53-207ENST00000468117 CCDC87Q9NVE4 849 aa25.58■■□□□ 1.68
TMEM53-207ENST00000468117 NUP98P52948 1817 aa25.57■■□□□ 1.68
TMEM53-207ENST00000468117 MTX1Q13505 466 aa25.57■■□□□ 1.68
TMEM53-207ENST00000468117 UBE3BQ7Z3V4 1068 aa25.57■■□□□ 1.68
TMEM53-207ENST00000468117 MAP3K15Q6ZN16 1313 aa25.57■■□□□ 1.68
TMEM53-207ENST00000468117 CWC25Q9NXE8 425 aaPredicted RBP25.56■■□□□ 1.68
TMEM53-207ENST00000468117 KCNQ4P56696 695 aa25.55■■□□□ 1.68
TMEM53-207ENST00000468117 TCIRG1Q13488 830 aa25.55■■□□□ 1.68
TMEM53-207ENST00000468117 NPM2Q86SE8 214 aaKnown RBP25.55■■□□□ 1.68
TMEM53-207ENST00000468117 C16orf71Q8IYS4 520 aaPredicted RBP25.54■■□□□ 1.68
TMEM53-207ENST00000468117 ANKRD36CQ5JPF3 1778 aa25.54■■□□□ 1.68
TMEM53-207ENST00000468117 EIF5P55010 431 aaKnown RBP25.54■■□□□ 1.68
TMEM53-207ENST00000468117 ZNF772Q68DY9 489 aaPredicted RBP25.54■■□□□ 1.68
TMEM53-207ENST00000468117 CCDC191Q8NCU4 936 aa25.54■■□□□ 1.68
TMEM53-207ENST00000468117 TBC1D2BQ9UPU7 963 aa25.54■■□□□ 1.68
TMEM53-207ENST00000468117 SURF6O75683 361 aaKnown RBP25.53■■□□□ 1.68
TMEM53-207ENST00000468117 HLFQ16534 295 aa25.53■■□□□ 1.68
TMEM53-207ENST00000468117 EPHA10Q5JZY3 1008 aa25.53■■□□□ 1.68
TMEM53-207ENST00000468117 ISCA1Q9BUE6 129 aa25.53■■□□□ 1.68
TMEM53-207ENST00000468117 CASP7P55210 303 aa25.53■■□□□ 1.68
TMEM53-207ENST00000468117 GIGYF2Q6Y7W6 1299 aaKnown RBP25.53■■□□□ 1.68
TMEM53-207ENST00000468117 DZIP3Q86Y13 1208 aaKnown RBP25.53■■□□□ 1.68
TMEM53-207ENST00000468117 RTL5Q5HYW3 569 aaPredicted RBP25.52■■□□□ 1.68
TMEM53-207ENST00000468117 LINC00116Q8NCU8 138 aa25.52■■□□□ 1.68
TMEM53-207ENST00000468117 LRRCC1Q9C099 1032 aa25.52■■□□□ 1.68
TMEM53-207ENST00000468117 H7C1W4 665 aa25.51■■□□□ 1.67
TMEM53-207ENST00000468117 OTUD7AQ8TE49 926 aaPredicted RBP25.51■■□□□ 1.67
TMEM53-207ENST00000468117 LY75O60449 1722 aa25.51■■□□□ 1.67
TMEM53-207ENST00000468117 KRT27Q7Z3Y8 459 aa25.51■■□□□ 1.67
TMEM53-207ENST00000468117 PLEKHM2Q8IWE5 1019 aa25.5■■□□□ 1.67
TMEM53-207ENST00000468117 RBM6P78332 1123 aaKnown RBP25.49■■□□□ 1.67
TMEM53-207ENST00000468117 COL15A1P39059 1388 aa25.48■■□□□ 1.67
TMEM53-207ENST00000468117 TRIM28Q13263 835 aaKnown RBP25.48■■□□□ 1.67
TMEM53-207ENST00000468117 PA2G4Q9UQ80 394 aaKnown RBP25.48■■□□□ 1.67
TMEM53-207ENST00000468117 ERVV-1B6SEH8 477 aa25.47■■□□□ 1.67
TMEM53-207ENST00000468117 GPTP24298 496 aa25.47■■□□□ 1.67
TMEM53-207ENST00000468117 TAF1LQ8IZX4 1826 aa25.47■■□□□ 1.67
TMEM53-207ENST00000468117 RAB11FIP3O75154 756 aa25.46■■□□□ 1.67
TMEM53-207ENST00000468117 HSP90AB3PQ58FF7 597 aa25.46■■□□□ 1.67
TMEM53-207ENST00000468117 BCL11BQ9C0K0 894 aaPredicted RBP25.46■■□□□ 1.67
TMEM53-207ENST00000468117 NOP58Q9Y2X3 529 aaKnown RBP25.46■■□□□ 1.67
TMEM53-207ENST00000468117 RABL6Q3YEC7 729 aaPredicted RBP25.46■■□□□ 1.67
TMEM53-207ENST00000468117 FAM196AQ6ZSG2 479 aa25.46■■□□□ 1.67
TMEM53-207ENST00000468117 CCNL1Q9UK58 526 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms