RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 FKBP8Q14318 412 aa8.69□□□□□ -1.02
UBXN4-205ENST00000467065 NLGN1Q8N2Q7 840 aa8.69□□□□□ -1.02
UBXN4-205ENST00000467065 MAPK8IP3Q9UPT6 1336 aa8.69□□□□□ -1.02
UBXN4-205ENST00000467065 HEG1Q9ULI3 1381 aa8.69□□□□□ -1.02
UBXN4-205ENST00000467065 GRIN3BO60391 1043 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 DDR1Q08345 913 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 ZNF790Q6PG37 636 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 MIER1Q8N108 512 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 ZNF496Q96IT1 587 aaPredicted RBP8.68□□□□□ -1.02
UBXN4-205ENST00000467065 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
UBXN4-205ENST00000467065 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 MAP3K13O43283 966 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 KCNQ3O43525 872 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 FCHSD2O94868 740 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
UBXN4-205ENST00000467065 TIE1P35590 1138 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 NUP98P52948 1817 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 DCTN1Q14203 1278 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 USPL1Q5W0Q7 1092 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 MCM10Q7L590 875 aa8.67□□□□□ -1.02
UBXN4-205ENST00000467065 ARFGEF2Q9Y6D5 1785 aa8.66□□□□□ -1.02
UBXN4-205ENST00000467065 A0A0G2JLW4 131 aa8.66□□□□□ -1.02
UBXN4-205ENST00000467065 ZPR1O75312 459 aa8.66□□□□□ -1.02
UBXN4-205ENST00000467065 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
UBXN4-205ENST00000467065 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
UBXN4-205ENST00000467065 NARFQ9UHQ1 456 aa8.66□□□□□ -1.02
UBXN4-205ENST00000467065 ZNF330Q9Y3S2 320 aaPredicted RBP8.66□□□□□ -1.02
UBXN4-205ENST00000467065 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
UBXN4-205ENST00000467065 ATP10DQ9P241 1426 aa8.65□□□□□ -1.02
UBXN4-205ENST00000467065 POLRMTO00411 1230 aaKnown RBP8.65□□□□□ -1.02
UBXN4-205ENST00000467065 STARD3NLO95772 234 aa8.65□□□□□ -1.02
UBXN4-205ENST00000467065 DPEP1P16444 411 aa8.65□□□□□ -1.02
UBXN4-205ENST00000467065 PIP4K2AP48426 406 aaPredicted RBP8.65□□□□□ -1.02
UBXN4-205ENST00000467065 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
UBXN4-205ENST00000467065 BCS1LQ9Y276 419 aa8.65□□□□□ -1.02
UBXN4-205ENST00000467065 ADCY9O60503 1353 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 CARMIL3Q8ND23 1372 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 PRAMEF22A3QJZ6 481 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 A1BGP04217 495 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 TM4SF1P30408 202 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 EIF5P55010 431 aaKnown RBP8.64□□□□□ -1.03
UBXN4-205ENST00000467065 TGFB2P61812 414 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 NFIXQ14938 502 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 RASEFQ8IZ41 740 aa8.64□□□□□ -1.03
UBXN4-205ENST00000467065 COLQQ9Y215 455 aaPredicted RBP8.64□□□□□ -1.03
UBXN4-205ENST00000467065 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 DICER1Q9UPY3 1922 aaKnown RBP8.63□□□□□ -1.03
UBXN4-205ENST00000467065 TTLL13PA6NNM8 815 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 CHRNA5P30532 468 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 LMOD3Q0VAK6 560 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 PLEKHF1Q96S99 279 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 THUMPD2Q9BTF0 503 aaKnown RBP8.63□□□□□ -1.03
UBXN4-205ENST00000467065 TEX13AQ9BXU3 409 aaPredicted RBP8.63□□□□□ -1.03
UBXN4-205ENST00000467065 MIS18AQ9NYP9 233 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 FER1L6Q2WGJ9 1857 aa8.63□□□□□ -1.03
UBXN4-205ENST00000467065 A0A087WZG4 1122 aa8.62□□□□□ -1.03
UBXN4-205ENST00000467065 HTATSF1O43719 755 aaKnown RBP8.62□□□□□ -1.03
UBXN4-205ENST00000467065 KCNA3P22001 575 aa8.62□□□□□ -1.03
UBXN4-205ENST00000467065 IL6STP40189 918 aaPredicted RBP8.62□□□□□ -1.03
UBXN4-205ENST00000467065 CALD1Q05682 793 aaKnown RBP8.62□□□□□ -1.03
UBXN4-205ENST00000467065 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
UBXN4-205ENST00000467065 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
UBXN4-205ENST00000467065 ZNF526Q8TF50 670 aaPredicted RBP8.62□□□□□ -1.03
UBXN4-205ENST00000467065 RUNDC1Q96C34 613 aa8.62□□□□□ -1.03
UBXN4-205ENST00000467065 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
UBXN4-205ENST00000467065 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
UBXN4-205ENST00000467065 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
UBXN4-205ENST00000467065 GIGYF1O75420 1035 aaPredicted RBP8.61□□□□□ -1.03
UBXN4-205ENST00000467065 SERPINB2P05120 415 aa8.61□□□□□ -1.03
UBXN4-205ENST00000467065 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
UBXN4-205ENST00000467065 TBC1D9BQ66K14 1250 aa8.61□□□□□ -1.03
UBXN4-205ENST00000467065 PIM2Q9P1W9 311 aa8.61□□□□□ -1.03
UBXN4-205ENST00000467065 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
UBXN4-205ENST00000467065 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
UBXN4-205ENST00000467065 TAF7Q15545 349 aaPredicted RBP8.6□□□□□ -1.03
UBXN4-205ENST00000467065 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
UBXN4-205ENST00000467065 ARHGAP27Q6ZUM4 889 aa8.6□□□□□ -1.03
UBXN4-205ENST00000467065 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
UBXN4-205ENST00000467065 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
UBXN4-205ENST00000467065 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
UBXN4-205ENST00000467065 LAMB2P55268 1798 aa8.59□□□□□ -1.03
UBXN4-205ENST00000467065 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
UBXN4-205ENST00000467065 NEUROD2Q15784 382 aa8.59□□□□□ -1.03
UBXN4-205ENST00000467065 NBPF10Q6P3W6 841 aaKnown RBP8.59□□□□□ -1.03
UBXN4-205ENST00000467065 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
UBXN4-205ENST00000467065 NBPF15Q8N660 670 aa8.59□□□□□ -1.03
UBXN4-205ENST00000467065 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
UBXN4-205ENST00000467065 GPBP1L1Q9HC44 474 aaPredicted RBP8.59□□□□□ -1.03
UBXN4-205ENST00000467065 RIPK4P57078 832 aa8.58□□□□□ -1.04
UBXN4-205ENST00000467065 C1QTNF8P60827 252 aa8.58□□□□□ -1.04
UBXN4-205ENST00000467065 IER5LQ5T953 404 aa8.58□□□□□ -1.04
UBXN4-205ENST00000467065 PRR5LQ6MZQ0 368 aa8.58□□□□□ -1.04
UBXN4-205ENST00000467065 C2CD5Q86YS7 1000 aa8.58□□□□□ -1.04
UBXN4-205ENST00000467065 CHMP4AQ9BY43 222 aa8.58□□□□□ -1.04
UBXN4-205ENST00000467065 RRP7AQ9Y3A4 280 aaKnown RBP8.58□□□□□ -1.04
UBXN4-205ENST00000467065 CEP350Q5VT06 3117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms