RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 TAF1DQ9H5J8 278 aaPredicted RBP11.47□□□□□ -0.57
DDR1-242ENST00000465966 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
DDR1-242ENST00000465966 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.57
DDR1-242ENST00000465966 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
DDR1-242ENST00000465966 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
DDR1-242ENST00000465966 VEGFBP49765 207 aa11.46□□□□□ -0.57
DDR1-242ENST00000465966 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.57
DDR1-242ENST00000465966 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
DDR1-242ENST00000465966 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
DDR1-242ENST00000465966 HACL1Q9UJ83 578 aa11.46□□□□□ -0.57
DDR1-242ENST00000465966 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
DDR1-242ENST00000465966 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
DDR1-242ENST00000465966 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
DDR1-242ENST00000465966 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
DDR1-242ENST00000465966 RTKN2Q8IZC4 609 aa11.45□□□□□ -0.58
DDR1-242ENST00000465966 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
DDR1-242ENST00000465966 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
DDR1-242ENST00000465966 TIAM2Q8IVF5 1701 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 ITGBL1O95965 494 aaPredicted RBP11.44□□□□□ -0.58
DDR1-242ENST00000465966 A1BGP04217 495 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 NPR1P16066 1061 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 EPHX2P34913 555 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 LBX1P52954 281 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 MAP2K1Q02750 393 aaPredicted RBP11.44□□□□□ -0.58
DDR1-242ENST00000465966 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDR1-242ENST00000465966 DEFB115Q30KQ5 88 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 TPTE2Q6XPS3 522 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
DDR1-242ENST00000465966 U2SURPO15042 1029 aaKnown RBP11.43□□□□□ -0.58
DDR1-242ENST00000465966 C7orf43Q8WVR3 580 aa11.43□□□□□ -0.58
DDR1-242ENST00000465966 ZNF277Q9NRM2 450 aaPredicted RBP11.43□□□□□ -0.58
DDR1-242ENST00000465966 AFDNP55196 1824 aaKnown RBP11.42□□□□□ -0.58
DDR1-242ENST00000465966 DLEC1Q9Y238 1755 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 RASSF10A6NK89 507 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 BTBD11A6QL63 1104 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 ALDH1B1P30837 517 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
DDR1-242ENST00000465966 CNTROBQ8N137 903 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 BEGAINQ9BUH8 593 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 ABT1Q9ULW3 272 aaKnown RBP11.42□□□□□ -0.58
DDR1-242ENST00000465966 PCNTO95613 3336 aa11.42□□□□□ -0.58
DDR1-242ENST00000465966 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
DDR1-242ENST00000465966 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
DDR1-242ENST00000465966 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
DDR1-242ENST00000465966 CCDC184Q52MB2 194 aa11.41□□□□□ -0.58
DDR1-242ENST00000465966 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
DDR1-242ENST00000465966 MAP1SQ66K74 1059 aaPredicted RBP11.41□□□□□ -0.58
DDR1-242ENST00000465966 GPC2Q8N158 579 aa11.41□□□□□ -0.58
DDR1-242ENST00000465966 ABHD8Q96I13 439 aa11.41□□□□□ -0.58
DDR1-242ENST00000465966 WDR33Q9C0J8 1336 aaKnown RBP11.4□□□□□ -0.58
DDR1-242ENST00000465966 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
DDR1-242ENST00000465966 FZD9O00144 591 aa11.4□□□□□ -0.58
DDR1-242ENST00000465966 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
DDR1-242ENST00000465966 IARSP41252 1262 aaKnown RBP11.4□□□□□ -0.58
DDR1-242ENST00000465966 SYNE4Q8N205 404 aa11.4□□□□□ -0.58
DDR1-242ENST00000465966 NIP7Q9Y221 180 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDR1-242ENST00000465966 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
DDR1-242ENST00000465966 RGL2O15211 777 aa11.39□□□□□ -0.59
DDR1-242ENST00000465966 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
DDR1-242ENST00000465966 HSPA8P11142 646 aaKnown RBP11.39□□□□□ -0.59
DDR1-242ENST00000465966 ECE1P42892 770 aa11.39□□□□□ -0.59
DDR1-242ENST00000465966 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
DDR1-242ENST00000465966 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
DDR1-242ENST00000465966 YTHDC1Q96MU7 727 aaKnown RBP11.39□□□□□ -0.59
DDR1-242ENST00000465966 USP16Q9Y5T5 823 aa11.39□□□□□ -0.59
DDR1-242ENST00000465966 MYBBP1AQ9BQG0 1328 aaKnown RBP11.38□□□□□ -0.59
DDR1-242ENST00000465966 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
DDR1-242ENST00000465966 KCNQ3O43525 872 aa11.38□□□□□ -0.59
DDR1-242ENST00000465966 SLC34A2O95436 690 aa11.38□□□□□ -0.59
DDR1-242ENST00000465966 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
DDR1-242ENST00000465966 RALBP1Q15311 655 aa11.38□□□□□ -0.59
DDR1-242ENST00000465966 CC2D2BQ6DHV5 1058 aa11.38□□□□□ -0.59
DDR1-242ENST00000465966 RTF1Q92541 710 aaKnown RBP11.38□□□□□ -0.59
DDR1-242ENST00000465966 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDR1-242ENST00000465966 CEMIPQ8WUJ3 1361 aa11.38□□□□□ -0.59
DDR1-242ENST00000465966 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
DDR1-242ENST00000465966 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
DDR1-242ENST00000465966 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
DDR1-242ENST00000465966 PSMD1Q99460 953 aa11.37□□□□□ -0.59
DDR1-242ENST00000465966 GJA3Q9Y6H8 435 aa11.37□□□□□ -0.59
DDR1-242ENST00000465966 SCN7AQ01118 1682 aa11.36□□□□□ -0.59
DDR1-242ENST00000465966 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
DDR1-242ENST00000465966 CCDC85CA6NKD9 419 aa11.36□□□□□ -0.59
DDR1-242ENST00000465966 MLLT1Q03111 559 aaPredicted RBP11.36□□□□□ -0.59
DDR1-242ENST00000465966 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
DDR1-242ENST00000465966 NYXQ9GZU5 481 aa11.36□□□□□ -0.59
DDR1-242ENST00000465966 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
DDR1-242ENST00000465966 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 GRM1Q13255 1194 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 USP50Q70EL3 339 aaPredicted RBP11.35□□□□□ -0.59
DDR1-242ENST00000465966 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
DDR1-242ENST00000465966 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 CAPNS2Q96L46 248 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 GPR101Q96P66 508 aaPredicted RBP11.35□□□□□ -0.59
DDR1-242ENST00000465966 TMX4Q9H1E5 349 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms